RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 MROH2AA6NES4 1674 aa0.02□□□□□ -2.41
SNHG1-210ENST00000539303 SSPOA2VEC9 5147 aa0.01□□□□□ -2.41
SNHG1-210ENST00000539303 LRP2P98164 4655 aa0.01□□□□□ -2.41
SNHG1-210ENST00000539303 MAST1Q9Y2H9 1570 aa0.01□□□□□ -2.41
SNHG1-210ENST00000539303 A0A1B0GUL6 1792 aa0.01□□□□□ -2.41
SNHG1-210ENST00000539303 H0YGX0 51 aa0□□□□□ -2.41
SNHG1-210ENST00000539303 STAB1Q9NY15 2570 aa0□□□□□ -2.41
SNHG1-210ENST00000539303 PREX2Q70Z35 1606 aa-0.01□□□□□ -2.41
SNHG1-210ENST00000539303 ZZEF1O43149 2961 aa-0.01□□□□□ -2.41
SNHG1-210ENST00000539303 PDZD2O15018 2839 aa-0.01□□□□□ -2.41
SNHG1-210ENST00000539303 NBEAL1Q6ZS30 2694 aa-0.01□□□□□ -2.41
SNHG1-210ENST00000539303 ABRACLQ9P1F3 81 aa-0.01□□□□□ -2.41
SNHG1-210ENST00000539303 SONP18583 2426 aaKnown RBP-0.01□□□□□ -2.41
SNHG1-210ENST00000539303 DMXL1Q9Y485 3027 aa-0.01□□□□□ -2.41
SNHG1-210ENST00000539303 IGLV5-48A0A075B6I7 105 aa-0.02□□□□□ -2.41
SNHG1-210ENST00000539303 SPG11Q96JI7 2443 aa-0.02□□□□□ -2.41
SNHG1-210ENST00000539303 LRP1BQ9NZR2 4599 aa-0.02□□□□□ -2.41
SNHG1-210ENST00000539303 GCN1Q92616 2671 aaKnown RBP-0.02□□□□□ -2.41
SNHG1-210ENST00000539303 SPRR2EP22531 72 aa-0.03□□□□□ -2.41
SNHG1-210ENST00000539303 NOP10Q9NPE3 64 aaKnown RBP-0.03□□□□□ -2.41
SNHG1-210ENST00000539303 PKD1P98161 4303 aa-0.03□□□□□ -2.41
SNHG1-210ENST00000539303 EFCAB6Q5THR3 1501 aa-0.03□□□□□ -2.41
SNHG1-210ENST00000539303 SYCP2Q9BX26 1530 aa-0.03□□□□□ -2.41
SNHG1-210ENST00000539303 SVEP1Q4LDE5 3571 aa-0.04□□□□□ -2.42
SNHG1-210ENST00000539303 AGLP35573 1532 aa-0.04□□□□□ -2.42
SNHG1-210ENST00000539303 NBPF19A0A087WUL8 3843 aa-0.05□□□□□ -2.42
SNHG1-210ENST00000539303 STAB2Q8WWQ8 2551 aa-0.05□□□□□ -2.42
SNHG1-210ENST00000539303 SMIM27A0A1W2PRY6 76 aa-0.05□□□□□ -2.42
SNHG1-210ENST00000539303 PLNP26678 52 aa-0.05□□□□□ -2.42
SNHG1-210ENST00000539303 MTORP42345 2549 aa-0.05□□□□□ -2.42
SNHG1-210ENST00000539303 TGP01266 2768 aa-0.06□□□□□ -2.42
SNHG1-210ENST00000539303 HIVEP1P15822 2718 aa-0.06□□□□□ -2.42
SNHG1-210ENST00000539303 DEFB110Q30KQ9 67 aa-0.06□□□□□ -2.42
SNHG1-210ENST00000539303 KAAG1Q9UBP8 84 aa-0.06□□□□□ -2.42
SNHG1-210ENST00000539303 ANKRD11Q6UB99 2663 aaPredicted RBP-0.06□□□□□ -2.42
SNHG1-210ENST00000539303 PKHD1P08F94 4074 aa-0.06□□□□□ -2.42
SNHG1-210ENST00000539303 SRRM2Q9UQ35 2752 aaKnown RBP-0.06□□□□□ -2.42
SNHG1-210ENST00000539303 DSTQ03001 7570 aaKnown RBP-0.07□□□□□ -2.42
SNHG1-210ENST00000539303 FLGP20930 4061 aaPredicted RBP-0.07□□□□□ -2.42
SNHG1-210ENST00000539303 ADCY10Q96PN6 1610 aa-0.07□□□□□ -2.42
SNHG1-210ENST00000539303 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
SNHG1-210ENST00000539303 VPS13BQ7Z7G8 4022 aa-0.07□□□□□ -2.42
SNHG1-210ENST00000539303 MMP24-AS1A0A0U1RRL7 71 aa-0.08□□□□□ -2.42
SNHG1-210ENST00000539303 MT1AP04731 61 aa-0.08□□□□□ -2.42
SNHG1-210ENST00000539303 LRRK2Q5S007 2527 aa-0.08□□□□□ -2.42
SNHG1-210ENST00000539303 TACC2O95359 2948 aa-0.08□□□□□ -2.42
SNHG1-210ENST00000539303 LAMA5O15230 3695 aa-0.09□□□□□ -2.42
SNHG1-210ENST00000539303 WFDC10BQ8IUB3 73 aa-0.09□□□□□ -2.42
SNHG1-210ENST00000539303 CUBNO60494 3623 aa-0.09□□□□□ -2.42
SNHG1-210ENST00000539303 AKAP9Q99996 3911 aa-0.09□□□□□ -2.42
SNHG1-210ENST00000539303 FANCD2Q9BXW9 1451 aa-0.1□□□□□ -2.42
SNHG1-210ENST00000539303 FASNP49327 2511 aaKnown RBP-0.1□□□□□ -2.42
SNHG1-210ENST00000539303 KALRNO60229 2985 aa-0.1□□□□□ -2.43
SNHG1-210ENST00000539303 LMO7Q8WWI1 1683 aa-0.1□□□□□ -2.43
SNHG1-210ENST00000539303 KRTAP6-1Q3LI64 71 aa-0.1□□□□□ -2.43
SNHG1-210ENST00000539303 CMC2Q9NRP2 79 aa-0.1□□□□□ -2.43
SNHG1-210ENST00000539303 ABCA5Q8WWZ7 1642 aa-0.1□□□□□ -2.43
SNHG1-210ENST00000539303 ABCC8Q09428 1581 aa-0.11□□□□□ -2.43
SNHG1-210ENST00000539303 FAM208AQ9UK61 1670 aaKnown RBP-0.11□□□□□ -2.43
SNHG1-210ENST00000539303 MXRA5Q9NR99 2828 aa-0.11□□□□□ -2.43
SNHG1-210ENST00000539303 EPG5Q9HCE0 2579 aa-0.11□□□□□ -2.43
SNHG1-210ENST00000539303 MUC12Q9UKN1 5478 aa-0.11□□□□□ -2.43
SNHG1-210ENST00000539303 KRTAP19-7Q3SYF9 63 aa-0.11□□□□□ -2.43
SNHG1-210ENST00000539303 SPRR2FQ96RM1 72 aa-0.11□□□□□ -2.43
SNHG1-210ENST00000539303 NBEAQ8NFP9 2946 aa-0.11□□□□□ -2.43
SNHG1-210ENST00000539303 KMT2CQ8NEZ4 4911 aaKnown RBP-0.12□□□□□ -2.43
SNHG1-210ENST00000539303 DNAH9Q9NYC9 4486 aa-0.12□□□□□ -2.43
SNHG1-210ENST00000539303 FAT3Q8TDW7 4589 aa-0.12□□□□□ -2.43
SNHG1-210ENST00000539303 STARD9Q9P2P6 4700 aa-0.12□□□□□ -2.43
SNHG1-210ENST00000539303 UTP20O75691 2785 aaKnown RBP-0.12□□□□□ -2.43
SNHG1-210ENST00000539303 M0QY20 66 aa-0.12□□□□□ -2.43
SNHG1-210ENST00000539303 TNP1P09430 55 aa-0.12□□□□□ -2.43
SNHG1-210ENST00000539303 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.12□□□□□ -2.43
SNHG1-210ENST00000539303 SPENQ96T58 3664 aaKnown RBP-0.12□□□□□ -2.43
SNHG1-210ENST00000539303 APOBP04114 4563 aaKnown RBP-0.13□□□□□ -2.43
SNHG1-210ENST00000539303 KIF21BO75037 1637 aa-0.13□□□□□ -2.43
SNHG1-210ENST00000539303 DDX60Q8IY21 1712 aaKnown RBP-0.13□□□□□ -2.43
SNHG1-210ENST00000539303 NBEAL2Q6ZNJ1 2754 aa-0.13□□□□□ -2.43
SNHG1-210ENST00000539303 DNAH3Q8TD57 4116 aa-0.13□□□□□ -2.43
SNHG1-210ENST00000539303 TFF3Q07654 80 aa-0.13□□□□□ -2.43
SNHG1-210ENST00000539303 NRXN3Q9Y4C0 1643 aa-0.13□□□□□ -2.43
SNHG1-210ENST00000539303 HTTP42858 3142 aa-0.13□□□□□ -2.43
SNHG1-210ENST00000539303 TEP1Q99973 2627 aaKnown RBP-0.14□□□□□ -2.43
SNHG1-210ENST00000539303 FAM186AA6NE01 2351 aa-0.14□□□□□ -2.43
SNHG1-210ENST00000539303 PKHD1L1Q86WI1 4243 aa-0.14□□□□□ -2.43
SNHG1-210ENST00000539303 DNAH6Q9C0G6 4158 aa-0.14□□□□□ -2.43
SNHG1-210ENST00000539303 VPS13DQ5THJ4 4388 aa-0.15□□□□□ -2.43
SNHG1-210ENST00000539303 FAT1Q14517 4588 aa-0.15□□□□□ -2.43
SNHG1-210ENST00000539303 ACACAQ13085 2346 aa-0.15□□□□□ -2.43
SNHG1-210ENST00000539303 HERC1Q15751 4861 aa-0.15□□□□□ -2.43
SNHG1-210ENST00000539303 MYO18BQ8IUG5 2567 aa-0.16□□□□□ -2.43
SNHG1-210ENST00000539303 SNRPGP15A8MWD9 76 aa-0.16□□□□□ -2.44
SNHG1-210ENST00000539303 SACSQ9NZJ4 4579 aa-0.16□□□□□ -2.44
SNHG1-210ENST00000539303 ACACBO00763 2458 aa-0.16□□□□□ -2.44
SNHG1-210ENST00000539303 CCDC168Q8NDH2 2452 aa-0.16□□□□□ -2.44
SNHG1-210ENST00000539303 PCLOQ9Y6V0 5065 aa-0.18□□□□□ -2.44
SNHG1-210ENST00000539303 A8MTW9 85 aa-0.18□□□□□ -2.44
SNHG1-210ENST00000539303 UBR4Q5T4S7 5183 aa-0.18□□□□□ -2.44
SNHG1-210ENST00000539303 IQGAP1P46940 1657 aa-0.18□□□□□ -2.44
SNHG1-210ENST00000539303 DNAH11Q96DT5 4516 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms