RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 KRTAP13-2Q52LG2 175 aa14.91□□□□□ -0.02
KLHL42-202ENST00000539176 C5orf47Q569G3 176 aa14.9□□□□□ -0.02
KLHL42-202ENST00000539176 FAM236DA0A1B0GTK5 79 aa14.87□□□□□ -0.03
KLHL42-202ENST00000539176 FAM236CP0DP71 79 aa14.87□□□□□ -0.03
KLHL42-202ENST00000539176 MMP24-AS1A0A0U1RRL7 71 aa14.86□□□□□ -0.03
KLHL42-202ENST00000539176 RPS28P62857 69 aaKnown RBP14.86□□□□□ -0.03
KLHL42-202ENST00000539176 PKHD1L1Q86WI1 4243 aa14.84□□□□□ -0.03
KLHL42-202ENST00000539176 ATP5EP56381 51 aaPredicted RBP14.83□□□□□ -0.04
KLHL42-202ENST00000539176 ASB16-AS1Q495Z4 193 aa14.83□□□□□ -0.04
KLHL42-202ENST00000539176 A0A1B0GVX0 72 aa14.82□□□□□ -0.04
KLHL42-202ENST00000539176 hDV103S1A0JD37 113 aa14.81□□□□□ -0.04
KLHL42-202ENST00000539176 PRR26Q8N8Z3 221 aa14.79□□□□□ -0.04
KLHL42-202ENST00000539176 C8orf17Q9NRJ1 99 aa14.78□□□□□ -0.04
KLHL42-202ENST00000539176 MP68P56378 58 aa14.77□□□□□ -0.05
KLHL42-202ENST00000539176 ZCCHC13Q8WW36 166 aaKnown RBP14.76□□□□□ -0.05
KLHL42-202ENST00000539176 Q5XG85 94 aa14.76□□□□□ -0.05
KLHL42-202ENST00000539176 Q8N1X5 172 aa14.75□□□□□ -0.05
KLHL42-202ENST00000539176 IGHV6-1A0A0B4J1U7 121 aa14.73□□□□□ -0.05
KLHL42-202ENST00000539176 H3BPC8 53 aa14.73□□□□□ -0.05
KLHL42-202ENST00000539176 TYMSOSQ8TAI1 123 aa14.73□□□□□ -0.05
KLHL42-202ENST00000539176 TP53AIP1Q9HCN2 124 aa14.7□□□□□ -0.06
KLHL42-202ENST00000539176 SERP1Q9Y6X1 66 aa14.67□□□□□ -0.06
KLHL42-202ENST00000539176 H0Y9P7 68 aa14.65□□□□□ -0.06
KLHL42-202ENST00000539176 LIMD2Q9BT23 127 aa14.65□□□□□ -0.06
KLHL42-202ENST00000539176 TRAV22A0A0B4J277 110 aa14.63□□□□□ -0.07
KLHL42-202ENST00000539176 MRPL34Q9BQ48 92 aaKnown RBP14.63□□□□□ -0.07
KLHL42-202ENST00000539176 C8orf87E5RJ46 101 aa14.61□□□□□ -0.07
KLHL42-202ENST00000539176 LINC00208Q96KT6 92 aa14.59□□□□□ -0.07
KLHL42-202ENST00000539176 KRTAP4-5Q9BYR2 181 aa14.58□□□□□ -0.08
KLHL42-202ENST00000539176 BIRC6Q9NR09 4857 aa14.58□□□□□ -0.08
KLHL42-202ENST00000539176 C4orf48Q5BLP8 95 aa14.56□□□□□ -0.08
KLHL42-202ENST00000539176 LRP1Q07954 4544 aaKnown RBP14.56□□□□□ -0.08
KLHL42-202ENST00000539176 FLG2Q5D862 2391 aaPredicted RBP14.55□□□□□ -0.08
KLHL42-202ENST00000539176 C1orf195Q5TG92 126 aa14.55□□□□□ -0.08
KLHL42-202ENST00000539176 LINC00304Q8N9R0 145 aa14.55□□□□□ -0.08
KLHL42-202ENST00000539176 OXTP01178 125 aa14.54□□□□□ -0.08
KLHL42-202ENST00000539176 SPINK1P00995 79 aa14.53□□□□□ -0.08
KLHL42-202ENST00000539176 NOTCH2NLQ7Z3S9 236 aa14.52□□□□□ -0.08
KLHL42-202ENST00000539176 C1orf64Q8NEQ6 169 aa14.52□□□□□ -0.09
KLHL42-202ENST00000539176 NDUFS5O43920 106 aa14.51□□□□□ -0.09
KLHL42-202ENST00000539176 RPS29P62273 56 aaKnown RBP14.48□□□□□ -0.09
KLHL42-202ENST00000539176 FAT3Q8TDW7 4589 aa14.47□□□□□ -0.09
KLHL42-202ENST00000539176 SPAG11AQ6PDA7 123 aa14.45□□□□□ -0.1
KLHL42-202ENST00000539176 KRTAP10-8P60410 259 aa14.44□□□□□ -0.1
KLHL42-202ENST00000539176 SPANXA2-OT1Q8N9U9 137 aa14.44□□□□□ -0.1
KLHL42-202ENST00000539176 TNXBP22105 4242 aa14.43□□□□□ -0.1
KLHL42-202ENST00000539176 LINC00313P59037 77 aa14.43□□□□□ -0.1
KLHL42-202ENST00000539176 CYP4F30PQ9H0H9 118 aa14.43□□□□□ -0.1
KLHL42-202ENST00000539176 MYCBP2O75592 4640 aa14.38□□□□□ -0.11
KLHL42-202ENST00000539176 HERC2O95714 4834 aa14.36□□□□□ -0.11
KLHL42-202ENST00000539176 SMIM26A0A096LP01 95 aa14.35□□□□□ -0.11
KLHL42-202ENST00000539176 MT1HL1P0DM35 61 aa14.33□□□□□ -0.11
KLHL42-202ENST00000539176 Q8N9P0 234 aaPredicted RBP14.33□□□□□ -0.11
KLHL42-202ENST00000539176 LOC101927531A0A1B0GV80 90 aa14.3□□□□□ -0.12
KLHL42-202ENST00000539176 KRTAP13-3Q3SY46 172 aa14.29□□□□□ -0.12
KLHL42-202ENST00000539176 ABCA13Q86UQ4 5058 aa14.28□□□□□ -0.12
KLHL42-202ENST00000539176 KRTAP16-1A8MUX0 517 aa14.26□□□□□ -0.13
KLHL42-202ENST00000539176 RETNLBQ9BQ08 111 aa14.24□□□□□ -0.13
KLHL42-202ENST00000539176 IGLV7-46A0A075B6I9 117 aa14.23□□□□□ -0.13
KLHL42-202ENST00000539176 PRR4Q16378 134 aa14.23□□□□□ -0.13
KLHL42-202ENST00000539176 Q5W150 140 aa14.23□□□□□ -0.13
KLHL42-202ENST00000539176 DMBT1Q9UGM3 2413 aaPredicted RBP14.2□□□□□ -0.14
KLHL42-202ENST00000539176 PCOTHQ58A44 107 aa14.18□□□□□ -0.14
KLHL42-202ENST00000539176 FP248Q71RG6 208 aaPredicted RBP14.17□□□□□ -0.14
KLHL42-202ENST00000539176 C4orf26Q17RF5 130 aa14.06□□□□□ -0.16
KLHL42-202ENST00000539176 IGKV2-30P06310 120 aa14.02□□□□□ -0.16
KLHL42-202ENST00000539176 J3QL48 77 aa13.97□□□□□ -0.17
KLHL42-202ENST00000539176 COA5Q86WW8 74 aa13.97□□□□□ -0.17
KLHL42-202ENST00000539176 C9orf92A6NGG3 77 aa13.96□□□□□ -0.17
KLHL42-202ENST00000539176 Q1T7F1 81 aa13.96□□□□□ -0.17
KLHL42-202ENST00000539176 MPLKIPQ8TAP9 179 aa13.95□□□□□ -0.18
KLHL42-202ENST00000539176 V9GYY9 64 aa13.91□□□□□ -0.18
KLHL42-202ENST00000539176 HRES1P13985 223 aa13.89□□□□□ -0.19
KLHL42-202ENST00000539176 C20orf166-AS1Q96NR2 134 aa13.89□□□□□ -0.19
KLHL42-202ENST00000539176 A8MUU9 505 aa13.86□□□□□ -0.19
KLHL42-202ENST00000539176 PCLOQ9Y6V0 5065 aa13.85□□□□□ -0.19
KLHL42-202ENST00000539176 DMAC1Q96GE9 116 aa13.84□□□□□ -0.19
KLHL42-202ENST00000539176 IGKV2D-30A0A075B6S6 120 aa13.83□□□□□ -0.2
KLHL42-202ENST00000539176 ACYP2P14621 99 aa13.81□□□□□ -0.2
KLHL42-202ENST00000539176 C7orf65Q6ZTY9 151 aa13.79□□□□□ -0.2
KLHL42-202ENST00000539176 Q75L30 129 aa13.69□□□□□ -0.22
KLHL42-202ENST00000539176 PSPHP1O15172 72 aa13.62□□□□□ -0.23
KLHL42-202ENST00000539176 XP32Q5T750 250 aa13.61□□□□□ -0.23
KLHL42-202ENST00000539176 CHKB-CPT1BH3BT56 60 aa13.61□□□□□ -0.23
KLHL42-202ENST00000539176 A8MUN3 132 aa13.58□□□□□ -0.24
KLHL42-202ENST00000539176 LINC01558Q9Y6Z2 57 aa13.58□□□□□ -0.24
KLHL42-202ENST00000539176 TPRXLQ17RH7 258 aa13.57□□□□□ -0.24
KLHL42-202ENST00000539176 LPAP08519 4548 aa13.55□□□□□ -0.24
KLHL42-202ENST00000539176 SVIPQ8NHG7 77 aa13.55□□□□□ -0.24
KLHL42-202ENST00000539176 PRR15LQ9BU68 103 aa13.55□□□□□ -0.24
KLHL42-202ENST00000539176 Q5VV11 94 aa13.53□□□□□ -0.24
KLHL42-202ENST00000539176 RPL37P61927 97 aaKnown RBP13.48□□□□□ -0.25
KLHL42-202ENST00000539176 PRO0628Q9UI54 55 aa13.48□□□□□ -0.25
KLHL42-202ENST00000539176 BRK1Q8WUW1 75 aa13.47□□□□□ -0.25
KLHL42-202ENST00000539176 SPINK7P58062 85 aa13.46□□□□□ -0.25
KLHL42-202ENST00000539176 HERC1Q15751 4861 aa13.46□□□□□ -0.25
KLHL42-202ENST00000539176 ATP11AUNQ6ZP68 121 aa13.44□□□□□ -0.26
KLHL42-202ENST00000539176 LRP2P98164 4655 aa13.39□□□□□ -0.27
KLHL42-202ENST00000539176 SPTSSBQ8NFR3 76 aa13.27□□□□□ -0.29
KLHL42-202ENST00000539176 HMCN2Q8NDA2 5059 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms