RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 A6NN06 94 aa5.39□□□□□ -1.55
GGA3-202ENST00000538886 LINC00313P59037 77 aa5.39□□□□□ -1.55
GGA3-202ENST00000538886 DNAH1Q9P2D7 4330 aa5.39□□□□□ -1.55
GGA3-202ENST00000538886 RYR3Q15413 4870 aa5.38□□□□□ -1.55
GGA3-202ENST00000538886 Q6ZRX8 168 aa5.38□□□□□ -1.55
GGA3-202ENST00000538886 KIAA1109Q2LD37 5005 aa5.38□□□□□ -1.55
GGA3-202ENST00000538886 RETNLBQ9BQ08 111 aa5.38□□□□□ -1.55
GGA3-202ENST00000538886 COA5Q86WW8 74 aa5.37□□□□□ -1.55
GGA3-202ENST00000538886 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
GGA3-202ENST00000538886 KCNQ1DNQ9H478 68 aa5.37□□□□□ -1.55
GGA3-202ENST00000538886 IGLV6-57P01721 117 aa5.36□□□□□ -1.55
GGA3-202ENST00000538886 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
GGA3-202ENST00000538886 RYR2Q92736 4967 aa5.35□□□□□ -1.55
GGA3-202ENST00000538886 Q6ZSA8 131 aa5.35□□□□□ -1.55
GGA3-202ENST00000538886 Q75L30 129 aa5.35□□□□□ -1.55
GGA3-202ENST00000538886 H0Y9J4 135 aa5.35□□□□□ -1.55
GGA3-202ENST00000538886 ADM2Q7Z4H4 148 aa5.34□□□□□ -1.55
GGA3-202ENST00000538886 VPS13DQ5THJ4 4388 aa5.34□□□□□ -1.55
GGA3-202ENST00000538886 ELOF1P60002 83 aaKnown RBP5.33□□□□□ -1.56
GGA3-202ENST00000538886 DNAH11Q96DT5 4516 aa5.33□□□□□ -1.56
GGA3-202ENST00000538886 DNAH5Q8TE73 4624 aa5.33□□□□□ -1.56
GGA3-202ENST00000538886 SPINK7P58062 85 aa5.33□□□□□ -1.56
GGA3-202ENST00000538886 KRTAP4-5Q9BYR2 181 aa5.32□□□□□ -1.56
GGA3-202ENST00000538886 IGLV5-37A0A075B6J1 123 aa5.3□□□□□ -1.56
GGA3-202ENST00000538886 Q8NBF4 154 aa5.3□□□□□ -1.56
GGA3-202ENST00000538886 LINC00304Q8N9R0 145 aa5.3□□□□□ -1.56
GGA3-202ENST00000538886 ZCCHC13Q8WW36 166 aaKnown RBP5.3□□□□□ -1.56
GGA3-202ENST00000538886 EPPK1P58107 5090 aaKnown RBP5.29□□□□□ -1.56
GGA3-202ENST00000538886 SPRR4Q96PI1 79 aa5.29□□□□□ -1.56
GGA3-202ENST00000538886 A0A087WSZ3 146 aa5.29□□□□□ -1.56
GGA3-202ENST00000538886 FRAS1Q86XX4 4008 aa5.28□□□□□ -1.56
GGA3-202ENST00000538886 ALMS1Q8TCU4 4167 aa5.28□□□□□ -1.56
GGA3-202ENST00000538886 A0A1W2PNM2 257 aa5.28□□□□□ -1.56
GGA3-202ENST00000538886 DSCR10P59022 87 aa5.28□□□□□ -1.56
GGA3-202ENST00000538886 FAT1Q14517 4588 aa5.28□□□□□ -1.56
GGA3-202ENST00000538886 A0A087X002 238 aa5.27□□□□□ -1.57
GGA3-202ENST00000538886 PKHD1P08F94 4074 aa5.26□□□□□ -1.57
GGA3-202ENST00000538886 Q8N377 158 aa5.26□□□□□ -1.57
GGA3-202ENST00000538886 DYNC1H1Q14204 4646 aaKnown RBP5.25□□□□□ -1.57
GGA3-202ENST00000538886 DYNC2H1Q8NCM8 4307 aaKnown RBP5.25□□□□□ -1.57
GGA3-202ENST00000538886 SPANXA2-OT1Q8N9U9 137 aa5.25□□□□□ -1.57
GGA3-202ENST00000538886 LRP1BQ9NZR2 4599 aa5.24□□□□□ -1.57
GGA3-202ENST00000538886 DNAH2Q9P225 4427 aa5.24□□□□□ -1.57
GGA3-202ENST00000538886 CSAG1Q6PB30 78 aa5.23□□□□□ -1.57
GGA3-202ENST00000538886 C9orf92A6NGG3 77 aa5.21□□□□□ -1.58
GGA3-202ENST00000538886 SPRR1AP35321 89 aa5.21□□□□□ -1.58
GGA3-202ENST00000538886 LINC01558Q9Y6Z2 57 aa5.2□□□□□ -1.58
GGA3-202ENST00000538886 H3BPC8 53 aa5.19□□□□□ -1.58
GGA3-202ENST00000538886 RYR1P21817 5038 aa5.19□□□□□ -1.58
GGA3-202ENST00000538886 DNAH6Q9C0G6 4158 aa5.19□□□□□ -1.58
GGA3-202ENST00000538886 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
GGA3-202ENST00000538886 IGLV5-48A0A075B6I7 105 aa5.18□□□□□ -1.58
GGA3-202ENST00000538886 IGLV8-61A0A075B6I0 122 aa5.17□□□□□ -1.58
GGA3-202ENST00000538886 DNAH17Q9UFH2 4485 aa5.17□□□□□ -1.58
GGA3-202ENST00000538886 A0A1B0GU69 56 aa5.17□□□□□ -1.58
GGA3-202ENST00000538886 A0A1B0GW54 56 aa5.16□□□□□ -1.58
GGA3-202ENST00000538886 IGFL1Q6UW32 110 aa5.16□□□□□ -1.58
GGA3-202ENST00000538886 KRTAP4-16G5E9R7 235 aaPredicted RBP5.16□□□□□ -1.58
GGA3-202ENST00000538886 IGLV7-46A0A075B6I9 117 aa5.16□□□□□ -1.58
GGA3-202ENST00000538886 IGHV6-1A0A0B4J1U7 121 aa5.16□□□□□ -1.58
GGA3-202ENST00000538886 BIRC6Q9NR09 4857 aa5.14□□□□□ -1.59
GGA3-202ENST00000538886 KRTAP13-2Q52LG2 175 aa5.14□□□□□ -1.59
GGA3-202ENST00000538886 SPINK1P00995 79 aa5.14□□□□□ -1.59
GGA3-202ENST00000538886 APOBP04114 4563 aaKnown RBP5.13□□□□□ -1.59
GGA3-202ENST00000538886 MIR22HGQ0VDD5 57 aa5.12□□□□□ -1.59
GGA3-202ENST00000538886 HRES1P13985 223 aa5.12□□□□□ -1.59
GGA3-202ENST00000538886 KRTAP13-1Q8IUC0 172 aa5.12□□□□□ -1.59
GGA3-202ENST00000538886 KRTAP1-4P0C5Y4 121 aa5.11□□□□□ -1.59
GGA3-202ENST00000538886 KRTAP17-1Q9BYP8 105 aa5.11□□□□□ -1.59
GGA3-202ENST00000538886 HERC2O95714 4834 aa5.11□□□□□ -1.59
GGA3-202ENST00000538886 A8MWP4 228 aa5.1□□□□□ -1.59
GGA3-202ENST00000538886 UQCR11O14957 56 aa5.08□□□□□ -1.6
GGA3-202ENST00000538886 Q96NJ1 140 aa5.08□□□□□ -1.6
GGA3-202ENST00000538886 FAT2Q9NYQ8 4349 aa5.08□□□□□ -1.6
GGA3-202ENST00000538886 MYCBP2O75592 4640 aa5.08□□□□□ -1.6
GGA3-202ENST00000538886 VPS13BQ7Z7G8 4022 aa5.07□□□□□ -1.6
GGA3-202ENST00000538886 KRTAP29-1A8MX34 341 aaPredicted RBP5.06□□□□□ -1.6
GGA3-202ENST00000538886 ACYP2P14621 99 aa5.06□□□□□ -1.6
GGA3-202ENST00000538886 LINC00483Q53H64 154 aa5.04□□□□□ -1.6
GGA3-202ENST00000538886 TP53AIP1Q9HCN2 124 aa5.04□□□□□ -1.6
GGA3-202ENST00000538886 HECTD4Q9Y4D8 3996 aa5.03□□□□□ -1.6
GGA3-202ENST00000538886 SPRR1BP22528 89 aa5.03□□□□□ -1.6
GGA3-202ENST00000538886 KRTAP10-4P60372 401 aaPredicted RBP5.03□□□□□ -1.6
GGA3-202ENST00000538886 CRIPTQ9P021 101 aa5.03□□□□□ -1.6
GGA3-202ENST00000538886 LRP1Q07954 4544 aaKnown RBP5.03□□□□□ -1.6
GGA3-202ENST00000538886 PKD1P98161 4303 aa5.02□□□□□ -1.61
GGA3-202ENST00000538886 KRTAP10-8P60410 259 aa5.01□□□□□ -1.61
GGA3-202ENST00000538886 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
GGA3-202ENST00000538886 DNAH8Q96JB1 4490 aa5□□□□□ -1.61
GGA3-202ENST00000538886 HSPG2P98160 4391 aa4.99□□□□□ -1.61
GGA3-202ENST00000538886 ROMO1P60602 79 aa4.99□□□□□ -1.61
GGA3-202ENST00000538886 MMP24-AS1A0A0U1RRL7 71 aa4.99□□□□□ -1.61
GGA3-202ENST00000538886 ABCA13Q86UQ4 5058 aa4.99□□□□□ -1.61
GGA3-202ENST00000538886 COX6B2Q6YFQ2 88 aa4.98□□□□□ -1.61
GGA3-202ENST00000538886 FAT3Q8TDW7 4589 aa4.98□□□□□ -1.61
GGA3-202ENST00000538886 MT1HL1P0DM35 61 aa4.98□□□□□ -1.61
GGA3-202ENST00000538886 C8orf17Q9NRJ1 99 aa4.97□□□□□ -1.61
GGA3-202ENST00000538886 ASB16-AS1Q495Z4 193 aa4.96□□□□□ -1.61
GGA3-202ENST00000538886 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
GGA3-202ENST00000538886 MRPL34Q9BQ48 92 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms