RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 IGLV5-52A0A0A0MRZ9 124 aa9.16□□□□□ -0.94
CDH20-203ENST00000538374 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
CDH20-203ENST00000538374 Q8N9P0 234 aaPredicted RBP9.13□□□□□ -0.95
CDH20-203ENST00000538374 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
CDH20-203ENST00000538374 Q5VV11 94 aa9.12□□□□□ -0.95
CDH20-203ENST00000538374 COA5Q86WW8 74 aa9.12□□□□□ -0.95
CDH20-203ENST00000538374 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
CDH20-203ENST00000538374 KRTAP10-2P60368 255 aa9.11□□□□□ -0.95
CDH20-203ENST00000538374 C1orf195Q5TG92 126 aa9.11□□□□□ -0.95
CDH20-203ENST00000538374 SPANXA2-OT1Q8N9U9 137 aa9.11□□□□□ -0.95
CDH20-203ENST00000538374 ZNF861PO60384 105 aa9.11□□□□□ -0.95
CDH20-203ENST00000538374 CIRBP-AS1Q8TBR5 109 aa9.11□□□□□ -0.95
CDH20-203ENST00000538374 PRR15LQ9BU68 103 aa9.1□□□□□ -0.95
CDH20-203ENST00000538374 SACSQ9NZJ4 4579 aa9.1□□□□□ -0.95
CDH20-203ENST00000538374 H3BPC8 53 aa9.1□□□□□ -0.95
CDH20-203ENST00000538374 CDK2AP2O75956 126 aa9.09□□□□□ -0.95
CDH20-203ENST00000538374 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
CDH20-203ENST00000538374 IGLV7-46A0A075B6I9 117 aa9.08□□□□□ -0.96
CDH20-203ENST00000538374 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
CDH20-203ENST00000538374 Q5W150 140 aa9.07□□□□□ -0.96
CDH20-203ENST00000538374 MRPL34Q9BQ48 92 aaKnown RBP9.06□□□□□ -0.96
CDH20-203ENST00000538374 SPAG11AQ6PDA7 123 aa9.06□□□□□ -0.96
CDH20-203ENST00000538374 RETNLBQ9BQ08 111 aa9.06□□□□□ -0.96
CDH20-203ENST00000538374 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
CDH20-203ENST00000538374 Q6ZSA8 131 aa9.03□□□□□ -0.96
CDH20-203ENST00000538374 TP53AIP1Q9HCN2 124 aa9.01□□□□□ -0.97
CDH20-203ENST00000538374 IGLV7-43P04211 117 aa9□□□□□ -0.97
CDH20-203ENST00000538374 VPS13BQ7Z7G8 4022 aa9□□□□□ -0.97
CDH20-203ENST00000538374 KRTAP10-1P60331 282 aa8.99□□□□□ -0.97
CDH20-203ENST00000538374 HRES1P13985 223 aa8.99□□□□□ -0.97
CDH20-203ENST00000538374 V9GYY9 64 aa8.98□□□□□ -0.97
CDH20-203ENST00000538374 SPTSSBQ8NFR3 76 aa8.97□□□□□ -0.97
CDH20-203ENST00000538374 LIMD2Q9BT23 127 aa8.97□□□□□ -0.97
CDH20-203ENST00000538374 PRR26Q8N8Z3 221 aa8.96□□□□□ -0.97
CDH20-203ENST00000538374 LCA10Q71F78 164 aa8.96□□□□□ -0.98
CDH20-203ENST00000538374 A6NED7 52 aa8.94□□□□□ -0.98
CDH20-203ENST00000538374 SEC61GP60059 68 aa8.94□□□□□ -0.98
CDH20-203ENST00000538374 PKHD1P08F94 4074 aa8.93□□□□□ -0.98
CDH20-203ENST00000538374 PMAIP1Q13794 54 aa8.91□□□□□ -0.98
CDH20-203ENST00000538374 RYR2Q92736 4967 aa8.9□□□□□ -0.99
CDH20-203ENST00000538374 KRTAP13-3Q3SY46 172 aa8.88□□□□□ -0.99
CDH20-203ENST00000538374 KRTAP13-2Q52LG2 175 aa8.88□□□□□ -0.99
CDH20-203ENST00000538374 SPINK7P58062 85 aa8.87□□□□□ -0.99
CDH20-203ENST00000538374 Q75L30 129 aa8.86□□□□□ -0.99
CDH20-203ENST00000538374 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
CDH20-203ENST00000538374 DYNC1H1Q14204 4646 aaKnown RBP8.84□□□□□ -0.99
CDH20-203ENST00000538374 A0A1B0GVY2 172 aa8.83□□□□□ -1
CDH20-203ENST00000538374 LINC00313P59037 77 aa8.83□□□□□ -1
CDH20-203ENST00000538374 LINC01558Q9Y6Z2 57 aa8.83□□□□□ -1
CDH20-203ENST00000538374 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
CDH20-203ENST00000538374 KMT2CQ8NEZ4 4911 aaKnown RBP8.79□□□□□ -1
CDH20-203ENST00000538374 APOBP04114 4563 aaKnown RBP8.77□□□□□ -1.01
CDH20-203ENST00000538374 FAT1Q14517 4588 aa8.76□□□□□ -1.01
CDH20-203ENST00000538374 KRTAP1-4P0C5Y4 121 aa8.74□□□□□ -1.01
CDH20-203ENST00000538374 IGKV2D-30A0A075B6S6 120 aa8.74□□□□□ -1.01
CDH20-203ENST00000538374 IGKV2-30P06310 120 aa8.74□□□□□ -1.01
CDH20-203ENST00000538374 CDC42SE1Q9NRR8 79 aa8.72□□□□□ -1.01
CDH20-203ENST00000538374 C8orf87E5RJ46 101 aa8.71□□□□□ -1.01
CDH20-203ENST00000538374 ACYP2P14621 99 aa8.71□□□□□ -1.01
CDH20-203ENST00000538374 ATP11AUNQ6ZP68 121 aa8.7□□□□□ -1.02
CDH20-203ENST00000538374 KRTAP16-1A8MUX0 517 aa8.69□□□□□ -1.02
CDH20-203ENST00000538374 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
CDH20-203ENST00000538374 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
CDH20-203ENST00000538374 A6NN06 94 aa8.67□□□□□ -1.02
CDH20-203ENST00000538374 DMAC1Q96GE9 116 aa8.67□□□□□ -1.02
CDH20-203ENST00000538374 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
CDH20-203ENST00000538374 PKHD1L1Q86WI1 4243 aa8.64□□□□□ -1.03
CDH20-203ENST00000538374 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
CDH20-203ENST00000538374 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
CDH20-203ENST00000538374 KTN1-AS1Q86SY8 53 aa8.6□□□□□ -1.03
CDH20-203ENST00000538374 SPINK1P00995 79 aa8.6□□□□□ -1.03
CDH20-203ENST00000538374 RYR3Q15413 4870 aa8.59□□□□□ -1.03
CDH20-203ENST00000538374 C4orf48Q5BLP8 95 aa8.59□□□□□ -1.03
CDH20-203ENST00000538374 Q8N1X5 172 aa8.58□□□□□ -1.04
CDH20-203ENST00000538374 A0A1B0GU69 56 aa8.57□□□□□ -1.04
CDH20-203ENST00000538374 C7orf65Q6ZTY9 151 aa8.57□□□□□ -1.04
CDH20-203ENST00000538374 C9orf92A6NGG3 77 aa8.52□□□□□ -1.05
CDH20-203ENST00000538374 RBM12B-AS1Q9P1G2 102 aa8.52□□□□□ -1.05
CDH20-203ENST00000538374 ADM2Q7Z4H4 148 aa8.51□□□□□ -1.05
CDH20-203ENST00000538374 PRAC1Q96KF2 57 aa8.5□□□□□ -1.05
CDH20-203ENST00000538374 HSPG2P98160 4391 aa8.48□□□□□ -1.05
CDH20-203ENST00000538374 LINC00304Q8N9R0 145 aa8.46□□□□□ -1.06
CDH20-203ENST00000538374 LRP1Q07954 4544 aaKnown RBP8.43□□□□□ -1.06
CDH20-203ENST00000538374 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
CDH20-203ENST00000538374 RYR1P21817 5038 aa8.41□□□□□ -1.06
CDH20-203ENST00000538374 MIR22HGQ0VDD5 57 aa8.41□□□□□ -1.06
CDH20-203ENST00000538374 MYCBP2O75592 4640 aa8.41□□□□□ -1.06
CDH20-203ENST00000538374 SPATA8Q6RVD6 105 aa8.38□□□□□ -1.07
CDH20-203ENST00000538374 UQCR11O14957 56 aa8.37□□□□□ -1.07
CDH20-203ENST00000538374 KRTAP17-1Q9BYP8 105 aa8.36□□□□□ -1.07
CDH20-203ENST00000538374 TNXBP22105 4242 aa8.36□□□□□ -1.07
CDH20-203ENST00000538374 KRTAP3-1Q9BYR8 98 aa8.31□□□□□ -1.08
CDH20-203ENST00000538374 Q5VSD8 79 aa8.3□□□□□ -1.08
CDH20-203ENST00000538374 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
CDH20-203ENST00000538374 FAT3Q8TDW7 4589 aa8.28□□□□□ -1.08
CDH20-203ENST00000538374 FLG2Q5D862 2391 aaPredicted RBP8.28□□□□□ -1.08
CDH20-203ENST00000538374 EPPK1P58107 5090 aaKnown RBP8.26□□□□□ -1.09
CDH20-203ENST00000538374 KIAA1109Q2LD37 5005 aa8.25□□□□□ -1.09
CDH20-203ENST00000538374 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
CDH20-203ENST00000538374 A8MUU9 505 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms