RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 CHTF8P0CG12 524 aa6.6□□□□□ -1.35
CLSTN3-207ENST00000537408 A0A1B0GVX0 72 aa6.59□□□□□ -1.35
CLSTN3-207ENST00000537408 CUBNO60494 3623 aa6.58□□□□□ -1.36
CLSTN3-207ENST00000537408 ZNF861PO60384 105 aa6.58□□□□□ -1.36
CLSTN3-207ENST00000537408 SPRR1BP22528 89 aa6.56□□□□□ -1.36
CLSTN3-207ENST00000537408 KRTAP25-1Q3LHN0 102 aa6.56□□□□□ -1.36
CLSTN3-207ENST00000537408 DMAC1Q96GE9 116 aa6.56□□□□□ -1.36
CLSTN3-207ENST00000537408 TENM3Q9P273 2699 aa6.54□□□□□ -1.36
CLSTN3-207ENST00000537408 KRTAP7-1Q8IUC3 87 aa6.53□□□□□ -1.36
CLSTN3-207ENST00000537408 TGP01266 2768 aa6.53□□□□□ -1.36
CLSTN3-207ENST00000537408 SMR3BP02814 79 aaPredicted RBP6.53□□□□□ -1.36
CLSTN3-207ENST00000537408 ZNF469Q96JG9 3925 aaPredicted RBP6.51□□□□□ -1.37
CLSTN3-207ENST00000537408 FLG2Q5D862 2391 aaPredicted RBP6.5□□□□□ -1.37
CLSTN3-207ENST00000537408 VWFP04275 2813 aa6.5□□□□□ -1.37
CLSTN3-207ENST00000537408 Q96NJ1 140 aa6.47□□□□□ -1.37
CLSTN3-207ENST00000537408 TENM2Q9NT68 2774 aa6.47□□□□□ -1.37
CLSTN3-207ENST00000537408 IGLV7-43P04211 117 aa6.47□□□□□ -1.37
CLSTN3-207ENST00000537408 ANK3Q12955 4377 aaKnown RBP6.46□□□□□ -1.37
CLSTN3-207ENST00000537408 PKD1L1Q8TDX9 2849 aa6.45□□□□□ -1.38
CLSTN3-207ENST00000537408 KRTAP1-5Q9BYS1 174 aa6.44□□□□□ -1.38
CLSTN3-207ENST00000537408 A0A0A0MQY5 61 aa6.43□□□□□ -1.38
CLSTN3-207ENST00000537408 K7ERS5 55 aa6.43□□□□□ -1.38
CLSTN3-207ENST00000537408 Q5W150 140 aa6.42□□□□□ -1.38
CLSTN3-207ENST00000537408 Q5VSD8 79 aa6.39□□□□□ -1.39
CLSTN3-207ENST00000537408 A8MUU9 505 aa6.39□□□□□ -1.39
CLSTN3-207ENST00000537408 SPACA4Q8TDM5 124 aa6.39□□□□□ -1.39
CLSTN3-207ENST00000537408 KRTAP10-2P60368 255 aa6.39□□□□□ -1.39
CLSTN3-207ENST00000537408 NOTCH2NLQ7Z3S9 236 aa6.39□□□□□ -1.39
CLSTN3-207ENST00000537408 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
CLSTN3-207ENST00000537408 LINC00483Q53H64 154 aa6.37□□□□□ -1.39
CLSTN3-207ENST00000537408 IGKV2D-30A0A075B6S6 120 aa6.36□□□□□ -1.39
CLSTN3-207ENST00000537408 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
CLSTN3-207ENST00000537408 KRTAP10-1P60331 282 aa6.36□□□□□ -1.39
CLSTN3-207ENST00000537408 KRTAP13-3Q3SY46 172 aa6.36□□□□□ -1.39
CLSTN3-207ENST00000537408 SSBP3-AS1Q7Z2R9 100 aa6.36□□□□□ -1.39
CLSTN3-207ENST00000537408 SRRM2Q9UQ35 2752 aaKnown RBP6.34□□□□□ -1.39
CLSTN3-207ENST00000537408 LINC00304Q8N9R0 145 aa6.34□□□□□ -1.39
CLSTN3-207ENST00000537408 ANAPC11Q9NYG5 84 aa6.34□□□□□ -1.39
CLSTN3-207ENST00000537408 PSORS1C2Q9UIG4 136 aa6.34□□□□□ -1.39
CLSTN3-207ENST00000537408 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.34□□□□□ -1.39
CLSTN3-207ENST00000537408 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
CLSTN3-207ENST00000537408 SPINK1P00995 79 aa6.33□□□□□ -1.4
CLSTN3-207ENST00000537408 P0C880 135 aa6.33□□□□□ -1.4
CLSTN3-207ENST00000537408 KRTAP16-1A8MUX0 517 aa6.31□□□□□ -1.4
CLSTN3-207ENST00000537408 Q8N1X5 172 aa6.31□□□□□ -1.4
CLSTN3-207ENST00000537408 Q6ZRN7 208 aaPredicted RBP6.3□□□□□ -1.4
CLSTN3-207ENST00000537408 KRTAP11-1Q8IUC1 163 aa6.27□□□□□ -1.41
CLSTN3-207ENST00000537408 ALMS1Q8TCU4 4167 aa6.25□□□□□ -1.41
CLSTN3-207ENST00000537408 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
CLSTN3-207ENST00000537408 A0A1B0GU33 70 aa6.24□□□□□ -1.41
CLSTN3-207ENST00000537408 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
CLSTN3-207ENST00000537408 PANO1I0J062 215 aa6.24□□□□□ -1.41
CLSTN3-207ENST00000537408 COX6B2Q6YFQ2 88 aa6.24□□□□□ -1.41
CLSTN3-207ENST00000537408 C20orf166-AS1Q96NR2 134 aa6.23□□□□□ -1.41
CLSTN3-207ENST00000537408 H0YAA0 97 aa6.22□□□□□ -1.41
CLSTN3-207ENST00000537408 KRTAP13-1Q8IUC0 172 aa6.22□□□□□ -1.41
CLSTN3-207ENST00000537408 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.41
CLSTN3-207ENST00000537408 Q6ZSA8 131 aa6.2□□□□□ -1.42
CLSTN3-207ENST00000537408 H1FX-AS1Q4G0G2 97 aa6.17□□□□□ -1.42
CLSTN3-207ENST00000537408 TRRAPQ9Y4A5 3859 aa6.16□□□□□ -1.42
CLSTN3-207ENST00000537408 A0A1B0GVY2 172 aa6.16□□□□□ -1.42
CLSTN3-207ENST00000537408 DNHD1Q96M86 4753 aa6.11□□□□□ -1.43
CLSTN3-207ENST00000537408 C9orf92A6NGG3 77 aa6.07□□□□□ -1.44
CLSTN3-207ENST00000537408 LUZP6Q538Z0 58 aa6.07□□□□□ -1.44
CLSTN3-207ENST00000537408 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
CLSTN3-207ENST00000537408 RPL37P61927 97 aaKnown RBP6□□□□□ -1.45
CLSTN3-207ENST00000537408 ANK2Q01484 3957 aa6□□□□□ -1.45
CLSTN3-207ENST00000537408 COL7A1Q02388 2944 aa5.99□□□□□ -1.45
CLSTN3-207ENST00000537408 M0R2T5 61 aa5.99□□□□□ -1.45
CLSTN3-207ENST00000537408 TPRXLQ17RH7 258 aa5.96□□□□□ -1.46
CLSTN3-207ENST00000537408 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
CLSTN3-207ENST00000537408 CMYA5Q8N3K9 4069 aa5.89□□□□□ -1.47
CLSTN3-207ENST00000537408 A0A0D9SG42 100 aa5.88□□□□□ -1.47
CLSTN3-207ENST00000537408 SEC61BP60468 96 aaKnown RBP5.87□□□□□ -1.47
CLSTN3-207ENST00000537408 DNAH1Q9P2D7 4330 aa5.87□□□□□ -1.47
CLSTN3-207ENST00000537408 DNAH9Q9NYC9 4486 aa5.81□□□□□ -1.48
CLSTN3-207ENST00000537408 DNAH3Q8TD57 4116 aa5.8□□□□□ -1.48
CLSTN3-207ENST00000537408 KRTAP13-2Q52LG2 175 aa5.8□□□□□ -1.48
CLSTN3-207ENST00000537408 HUWE1Q7Z6Z7 4374 aaKnown RBP5.8□□□□□ -1.48
CLSTN3-207ENST00000537408 LYSTQ99698 3801 aa5.79□□□□□ -1.48
CLSTN3-207ENST00000537408 DNAH10Q8IVF4 4471 aa5.75□□□□□ -1.49
CLSTN3-207ENST00000537408 PRKDCP78527 4128 aaKnown RBP5.74□□□□□ -1.49
CLSTN3-207ENST00000537408 CSMD3Q7Z407 3707 aa5.73□□□□□ -1.49
CLSTN3-207ENST00000537408 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
CLSTN3-207ENST00000537408 S4R3F8 94 aa5.72□□□□□ -1.49
CLSTN3-207ENST00000537408 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
CLSTN3-207ENST00000537408 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
CLSTN3-207ENST00000537408 KRTAP1-4P0C5Y4 121 aa5.69□□□□□ -1.5
CLSTN3-207ENST00000537408 KRTAP10-8P60410 259 aa5.69□□□□□ -1.5
CLSTN3-207ENST00000537408 DNAH7Q8WXX0 4024 aa5.65□□□□□ -1.5
CLSTN3-207ENST00000537408 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
CLSTN3-207ENST00000537408 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
CLSTN3-207ENST00000537408 KRTAP10-6P60371 365 aaPredicted RBP5.61□□□□□ -1.51
CLSTN3-207ENST00000537408 XP32Q5T750 250 aa5.59□□□□□ -1.52
CLSTN3-207ENST00000537408 KRTAP12-2P59991 146 aa5.56□□□□□ -1.52
CLSTN3-207ENST00000537408 PLECQ15149 4684 aaKnown RBP5.55□□□□□ -1.52
CLSTN3-207ENST00000537408 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
CLSTN3-207ENST00000537408 DNAH8Q96JB1 4490 aa5.54□□□□□ -1.52
CLSTN3-207ENST00000537408 DYNC2H1Q8NCM8 4307 aaKnown RBP5.53□□□□□ -1.52
CLSTN3-207ENST00000537408 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms