RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 CD164Q04900 197 aa4.87□□□□□ -1.63
CPSF7-216ENST00000536548 KRTAP7-1Q8IUC3 87 aa4.87□□□□□ -1.63
CPSF7-216ENST00000536548 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
CPSF7-216ENST00000536548 Q75L30 129 aa4.86□□□□□ -1.63
CPSF7-216ENST00000536548 C9orf163Q8N9P6 203 aa4.86□□□□□ -1.63
CPSF7-216ENST00000536548 PRR15LQ9BU68 103 aa4.86□□□□□ -1.63
CPSF7-216ENST00000536548 H0Y9J4 135 aa4.85□□□□□ -1.63
CPSF7-216ENST00000536548 NDUFS5O43920 106 aa4.85□□□□□ -1.63
CPSF7-216ENST00000536548 CNBPP62633 177 aaKnown RBP4.85□□□□□ -1.63
CPSF7-216ENST00000536548 ATP11AUNQ6ZP68 121 aa4.85□□□□□ -1.63
CPSF7-216ENST00000536548 TP53AIP1Q9HCN2 124 aa4.85□□□□□ -1.63
CPSF7-216ENST00000536548 IGLV7-46A0A075B6I9 117 aa4.84□□□□□ -1.63
CPSF7-216ENST00000536548 LOC101927531A0A1B0GV80 90 aa4.84□□□□□ -1.63
CPSF7-216ENST00000536548 DEFB116Q30KQ4 102 aa4.84□□□□□ -1.63
CPSF7-216ENST00000536548 RPL37AP61513 92 aaKnown RBP4.83□□□□□ -1.64
CPSF7-216ENST00000536548 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
CPSF7-216ENST00000536548 COA5Q86WW8 74 aa4.83□□□□□ -1.64
CPSF7-216ENST00000536548 LINC00472Q9H8W2 130 aa4.83□□□□□ -1.64
CPSF7-216ENST00000536548 LRP1Q07954 4544 aaKnown RBP4.82□□□□□ -1.64
CPSF7-216ENST00000536548 J3QL48 77 aa4.82□□□□□ -1.64
CPSF7-216ENST00000536548 PRLHP81277 87 aa4.82□□□□□ -1.64
CPSF7-216ENST00000536548 C14orf177Q52M58 125 aa4.82□□□□□ -1.64
CPSF7-216ENST00000536548 A6NED7 52 aa4.81□□□□□ -1.64
CPSF7-216ENST00000536548 MOBPQ13875 183 aa4.81□□□□□ -1.64
CPSF7-216ENST00000536548 A0A0G2JQZ4 141 aa4.8□□□□□ -1.64
CPSF7-216ENST00000536548 MMP24-AS1A0A0U1RRL7 71 aa4.8□□□□□ -1.64
CPSF7-216ENST00000536548 A0A1W2PNN7 141 aa4.8□□□□□ -1.64
CPSF7-216ENST00000536548 Q6ZR54 194 aa4.8□□□□□ -1.64
CPSF7-216ENST00000536548 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
CPSF7-216ENST00000536548 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
CPSF7-216ENST00000536548 A0A096LNI7 61 aa4.79□□□□□ -1.64
CPSF7-216ENST00000536548 Q5VSD8 79 aa4.79□□□□□ -1.64
CPSF7-216ENST00000536548 IGKV2-24A0A0C4DH68 120 aa4.78□□□□□ -1.64
CPSF7-216ENST00000536548 C1orf134Q5TEV5 83 aa4.78□□□□□ -1.64
CPSF7-216ENST00000536548 LRP2P98164 4655 aa4.77□□□□□ -1.65
CPSF7-216ENST00000536548 SPTSSBQ8NFR3 76 aa4.77□□□□□ -1.65
CPSF7-216ENST00000536548 ASB16-AS1Q495Z4 193 aa4.76□□□□□ -1.65
CPSF7-216ENST00000536548 PHF5AQ7RTV0 110 aaKnown RBP4.76□□□□□ -1.65
CPSF7-216ENST00000536548 FAT3Q8TDW7 4589 aa4.75□□□□□ -1.65
CPSF7-216ENST00000536548 A6NN06 94 aa4.75□□□□□ -1.65
CPSF7-216ENST00000536548 KRTAP10-2P60368 255 aa4.75□□□□□ -1.65
CPSF7-216ENST00000536548 LCA10Q71F78 164 aa4.75□□□□□ -1.65
CPSF7-216ENST00000536548 C8orf17Q9NRJ1 99 aa4.75□□□□□ -1.65
CPSF7-216ENST00000536548 PLAC8Q9NZF1 115 aa4.75□□□□□ -1.65
CPSF7-216ENST00000536548 SMR3BP02814 79 aaPredicted RBP4.74□□□□□ -1.65
CPSF7-216ENST00000536548 PCOTHQ58A44 107 aa4.74□□□□□ -1.65
CPSF7-216ENST00000536548 KRTAP9-2Q9BYQ4 174 aa4.74□□□□□ -1.65
CPSF7-216ENST00000536548 C7orf65Q6ZTY9 151 aa4.73□□□□□ -1.65
CPSF7-216ENST00000536548 ZNF706Q9Y5V0 76 aaPredicted RBP4.73□□□□□ -1.65
CPSF7-216ENST00000536548 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
CPSF7-216ENST00000536548 A0A1B0GVX0 72 aa4.72□□□□□ -1.65
CPSF7-216ENST00000536548 UBE2DNLQ8IWF7 75 aa4.72□□□□□ -1.65
CPSF7-216ENST00000536548 RBM12B-AS1Q9P1G2 102 aa4.72□□□□□ -1.65
CPSF7-216ENST00000536548 A8MU10 97 aa4.71□□□□□ -1.66
CPSF7-216ENST00000536548 MRPL34Q9BQ48 92 aaKnown RBP4.71□□□□□ -1.66
CPSF7-216ENST00000536548 SPAG11AQ6PDA7 123 aa4.7□□□□□ -1.66
CPSF7-216ENST00000536548 Q96NJ1 140 aa4.7□□□□□ -1.66
CPSF7-216ENST00000536548 HRES1P13985 223 aa4.69□□□□□ -1.66
CPSF7-216ENST00000536548 KRTAP13-1Q8IUC0 172 aa4.69□□□□□ -1.66
CPSF7-216ENST00000536548 LINC00483Q53H64 154 aa4.68□□□□□ -1.66
CPSF7-216ENST00000536548 PKHD1L1Q86WI1 4243 aa4.67□□□□□ -1.66
CPSF7-216ENST00000536548 IGHV6-1A0A0B4J1U7 121 aa4.67□□□□□ -1.66
CPSF7-216ENST00000536548 IGLV9-49A0A0B4J1Y8 123 aa4.67□□□□□ -1.66
CPSF7-216ENST00000536548 CHTF8P0CG12 524 aa4.67□□□□□ -1.66
CPSF7-216ENST00000536548 KRTAP11-1Q8IUC1 163 aa4.67□□□□□ -1.66
CPSF7-216ENST00000536548 ACYP2P14621 99 aa4.66□□□□□ -1.66
CPSF7-216ENST00000536548 DNAH8Q96JB1 4490 aa4.65□□□□□ -1.66
CPSF7-216ENST00000536548 FAM229AH3BQW9 127 aa4.65□□□□□ -1.67
CPSF7-216ENST00000536548 KRTAP1-5Q9BYS1 174 aa4.65□□□□□ -1.67
CPSF7-216ENST00000536548 NBDYA0A0U1RRE5 68 aa4.64□□□□□ -1.67
CPSF7-216ENST00000536548 C8orf87E5RJ46 101 aa4.64□□□□□ -1.67
CPSF7-216ENST00000536548 SPINK7P58062 85 aa4.64□□□□□ -1.67
CPSF7-216ENST00000536548 TNXBP22105 4242 aa4.63□□□□□ -1.67
CPSF7-216ENST00000536548 A0A087X002 238 aa4.63□□□□□ -1.67
CPSF7-216ENST00000536548 KRTAP10-1P60331 282 aa4.63□□□□□ -1.67
CPSF7-216ENST00000536548 SPACA4Q8TDM5 124 aa4.61□□□□□ -1.67
CPSF7-216ENST00000536548 FAT4Q6V0I7 4981 aa4.6□□□□□ -1.67
CPSF7-216ENST00000536548 MUC2Q02817 5179 aa4.6□□□□□ -1.67
CPSF7-216ENST00000536548 DMAC1Q96GE9 116 aa4.59□□□□□ -1.67
CPSF7-216ENST00000536548 A0A1B0GU69 56 aa4.58□□□□□ -1.68
CPSF7-216ENST00000536548 ZNF861PO60384 105 aa4.58□□□□□ -1.68
CPSF7-216ENST00000536548 KRTAP13-3Q3SY46 172 aa4.58□□□□□ -1.68
CPSF7-216ENST00000536548 PRR26Q8N8Z3 221 aa4.58□□□□□ -1.68
CPSF7-216ENST00000536548 IGLV5-52A0A0A0MRZ9 124 aa4.57□□□□□ -1.68
CPSF7-216ENST00000536548 LCE2BO14633 110 aa4.57□□□□□ -1.68
CPSF7-216ENST00000536548 PLA2G1BP04054 148 aaKnown RBP4.57□□□□□ -1.68
CPSF7-216ENST00000536548 SPATA8Q6RVD6 105 aa4.56□□□□□ -1.68
CPSF7-216ENST00000536548 LPAP08519 4548 aa4.56□□□□□ -1.68
CPSF7-216ENST00000536548 PANO1I0J062 215 aa4.55□□□□□ -1.68
CPSF7-216ENST00000536548 LINC00313P59037 77 aa4.55□□□□□ -1.68
CPSF7-216ENST00000536548 Q6ZRN7 208 aaPredicted RBP4.55□□□□□ -1.68
CPSF7-216ENST00000536548 SSBP3-AS1Q7Z2R9 100 aa4.55□□□□□ -1.68
CPSF7-216ENST00000536548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.55□□□□□ -1.68
CPSF7-216ENST00000536548 Q5W150 140 aa4.54□□□□□ -1.68
CPSF7-216ENST00000536548 SPINK6Q6UWN8 80 aa4.54□□□□□ -1.68
CPSF7-216ENST00000536548 NOTCH2NLQ7Z3S9 236 aa4.54□□□□□ -1.68
CPSF7-216ENST00000536548 PSORS1C2Q9UIG4 136 aa4.54□□□□□ -1.68
CPSF7-216ENST00000536548 UQCR11O14957 56 aa4.53□□□□□ -1.68
CPSF7-216ENST00000536548 FSIP2Q5CZC0 6907 aa4.52□□□□□ -1.69
CPSF7-216ENST00000536548 IGKV2-30P06310 120 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms