RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 C20orf166-AS1Q96NR2 134 aa6□□□□□ -1.45
TNFRSF1A-208ENST00000536194 A0A0U1RQV1 116 aa5.98□□□□□ -1.45
TNFRSF1A-208ENST00000536194 A8MUU9 505 aa5.98□□□□□ -1.45
TNFRSF1A-208ENST00000536194 LINC00313P59037 77 aa5.98□□□□□ -1.45
TNFRSF1A-208ENST00000536194 IGHV6-1A0A0B4J1U7 121 aa5.97□□□□□ -1.45
TNFRSF1A-208ENST00000536194 A0A1B0GVX0 72 aa5.97□□□□□ -1.45
TNFRSF1A-208ENST00000536194 J3KT08 172 aa5.96□□□□□ -1.46
TNFRSF1A-208ENST00000536194 KRTAP19-2Q3LHN2 52 aa5.96□□□□□ -1.46
TNFRSF1A-208ENST00000536194 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.46
TNFRSF1A-208ENST00000536194 FAT4Q6V0I7 4981 aa5.96□□□□□ -1.46
TNFRSF1A-208ENST00000536194 GTF2H5Q6ZYL4 71 aa5.95□□□□□ -1.46
TNFRSF1A-208ENST00000536194 IGKV3D-7A0A0C4DH55 119 aa5.93□□□□□ -1.46
TNFRSF1A-208ENST00000536194 A8MWP4 228 aa5.93□□□□□ -1.46
TNFRSF1A-208ENST00000536194 C8orf87E5RJ46 101 aa5.93□□□□□ -1.46
TNFRSF1A-208ENST00000536194 NREPQ16612 68 aa5.93□□□□□ -1.46
TNFRSF1A-208ENST00000536194 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
TNFRSF1A-208ENST00000536194 ATP11AUNQ6ZP68 121 aa5.93□□□□□ -1.46
TNFRSF1A-208ENST00000536194 F8W1H4 67 aa5.9□□□□□ -1.46
TNFRSF1A-208ENST00000536194 NDUFB1O75438 58 aa5.89□□□□□ -1.47
TNFRSF1A-208ENST00000536194 Q6ZVQ6 151 aa5.89□□□□□ -1.47
TNFRSF1A-208ENST00000536194 C8orf17Q9NRJ1 99 aa5.89□□□□□ -1.47
TNFRSF1A-208ENST00000536194 ETDBQ3ZM63 59 aa5.88□□□□□ -1.47
TNFRSF1A-208ENST00000536194 PRR15Q8IV56 129 aa5.88□□□□□ -1.47
TNFRSF1A-208ENST00000536194 K7EQZ3 153 aa5.87□□□□□ -1.47
TNFRSF1A-208ENST00000536194 KRTAP9-2Q9BYQ4 174 aa5.87□□□□□ -1.47
TNFRSF1A-208ENST00000536194 LINC00846Q9NV44 126 aa5.87□□□□□ -1.47
TNFRSF1A-208ENST00000536194 MMP24-AS1A0A0U1RRL7 71 aa5.85□□□□□ -1.47
TNFRSF1A-208ENST00000536194 BPY2O14599 106 aa5.85□□□□□ -1.47
TNFRSF1A-208ENST00000536194 Q8N9P0 234 aaPredicted RBP5.85□□□□□ -1.47
TNFRSF1A-208ENST00000536194 Q8N9L7 120 aa5.83□□□□□ -1.48
TNFRSF1A-208ENST00000536194 MT1HP80294 61 aa5.82□□□□□ -1.48
TNFRSF1A-208ENST00000536194 A0A1B0GV90 55 aa5.81□□□□□ -1.48
TNFRSF1A-208ENST00000536194 UBL5Q9BZL1 73 aa5.81□□□□□ -1.48
TNFRSF1A-208ENST00000536194 TMEM254Q8TBM7 123 aa5.8□□□□□ -1.48
TNFRSF1A-208ENST00000536194 ZCCHC13Q8WW36 166 aaKnown RBP5.8□□□□□ -1.48
TNFRSF1A-208ENST00000536194 hDV103S1A0JD37 113 aa5.79□□□□□ -1.48
TNFRSF1A-208ENST00000536194 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
TNFRSF1A-208ENST00000536194 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
TNFRSF1A-208ENST00000536194 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
TNFRSF1A-208ENST00000536194 HRES1P13985 223 aa5.76□□□□□ -1.49
TNFRSF1A-208ENST00000536194 WFDC13Q8IUB5 93 aa5.76□□□□□ -1.49
TNFRSF1A-208ENST00000536194 MPLKIPQ8TAP9 179 aa5.75□□□□□ -1.49
TNFRSF1A-208ENST00000536194 CASC2Q6XLA1 102 aa5.73□□□□□ -1.49
TNFRSF1A-208ENST00000536194 SPINK7P58062 85 aa5.72□□□□□ -1.49
TNFRSF1A-208ENST00000536194 FLGP20930 4061 aaPredicted RBP5.71□□□□□ -1.5
TNFRSF1A-208ENST00000536194 FAM240AA0A1B0GVK7 77 aa5.71□□□□□ -1.5
TNFRSF1A-208ENST00000536194 NDUFS5O43920 106 aa5.71□□□□□ -1.5
TNFRSF1A-208ENST00000536194 CXCL6P80162 114 aa5.71□□□□□ -1.5
TNFRSF1A-208ENST00000536194 HCG22E2RYF7 251 aa5.7□□□□□ -1.5
TNFRSF1A-208ENST00000536194 ACYP1P07311 99 aa5.7□□□□□ -1.5
TNFRSF1A-208ENST00000536194 Q5W150 140 aa5.7□□□□□ -1.5
TNFRSF1A-208ENST00000536194 LORP23490 312 aaPredicted RBP5.67□□□□□ -1.5
TNFRSF1A-208ENST00000536194 KRTAP10-6P60371 365 aaPredicted RBP5.67□□□□□ -1.5
TNFRSF1A-208ENST00000536194 M0R2T5 61 aa5.66□□□□□ -1.5
TNFRSF1A-208ENST00000536194 RBM12B-AS1Q9P1G2 102 aa5.66□□□□□ -1.5
TNFRSF1A-208ENST00000536194 FAM236DA0A1B0GTK5 79 aa5.65□□□□□ -1.5
TNFRSF1A-208ENST00000536194 FAM236CP0DP71 79 aa5.65□□□□□ -1.5
TNFRSF1A-208ENST00000536194 ATP5EP2Q5VTU8 51 aa5.62□□□□□ -1.51
TNFRSF1A-208ENST00000536194 IGKV2D-30A0A075B6S6 120 aa5.61□□□□□ -1.51
TNFRSF1A-208ENST00000536194 IGKV2-30P06310 120 aa5.61□□□□□ -1.51
TNFRSF1A-208ENST00000536194 C7orf65Q6ZTY9 151 aa5.59□□□□□ -1.51
TNFRSF1A-208ENST00000536194 LINC00643Q86TS7 51 aa5.58□□□□□ -1.52
TNFRSF1A-208ENST00000536194 HIST1H4AP62805 103 aaKnown RBP5.57□□□□□ -1.52
TNFRSF1A-208ENST00000536194 TP53AIP1Q9HCN2 124 aa5.56□□□□□ -1.52
TNFRSF1A-208ENST00000536194 A0A087WVE0 104 aa5.55□□□□□ -1.52
TNFRSF1A-208ENST00000536194 LCE2DQ5TA82 110 aaPredicted RBP5.55□□□□□ -1.52
TNFRSF1A-208ENST00000536194 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
TNFRSF1A-208ENST00000536194 J3QR89 54 aa5.53□□□□□ -1.52
TNFRSF1A-208ENST00000536194 C4orf26Q17RF5 130 aa5.51□□□□□ -1.53
TNFRSF1A-208ENST00000536194 TRAV22A0A0B4J277 110 aa5.49□□□□□ -1.53
TNFRSF1A-208ENST00000536194 H1FX-AS1Q4G0G2 97 aa5.49□□□□□ -1.53
TNFRSF1A-208ENST00000536194 MT2AP02795 61 aa5.48□□□□□ -1.53
TNFRSF1A-208ENST00000536194 CRCT1Q9UGL9 99 aa5.48□□□□□ -1.53
TNFRSF1A-208ENST00000536194 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
TNFRSF1A-208ENST00000536194 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
TNFRSF1A-208ENST00000536194 UQCRQO14949 82 aa5.45□□□□□ -1.54
TNFRSF1A-208ENST00000536194 CYP4F30PQ9H0H9 118 aa5.45□□□□□ -1.54
TNFRSF1A-208ENST00000536194 MT1FP04733 61 aa5.44□□□□□ -1.54
TNFRSF1A-208ENST00000536194 H0Y9P7 68 aa5.43□□□□□ -1.54
TNFRSF1A-208ENST00000536194 OCR1Q9BZK8 76 aa5.43□□□□□ -1.54
TNFRSF1A-208ENST00000536194 LOC101927531A0A1B0GV80 90 aa5.42□□□□□ -1.54
TNFRSF1A-208ENST00000536194 K7ERU9 68 aa5.41□□□□□ -1.54
TNFRSF1A-208ENST00000536194 C1orf64Q8NEQ6 169 aa5.41□□□□□ -1.54
TNFRSF1A-208ENST00000536194 MT-ATP8P03928 68 aa5.4□□□□□ -1.54
TNFRSF1A-208ENST00000536194 ATOX1O00244 68 aa5.38□□□□□ -1.55
TNFRSF1A-208ENST00000536194 KRTAP10-10P60014 251 aa5.37□□□□□ -1.55
TNFRSF1A-208ENST00000536194 LINC00208Q96KT6 92 aa5.36□□□□□ -1.55
TNFRSF1A-208ENST00000536194 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
TNFRSF1A-208ENST00000536194 IMUPQ9GZP8 106 aa5.35□□□□□ -1.55
TNFRSF1A-208ENST00000536194 KLKP1Q107X0 134 aa5.34□□□□□ -1.55
TNFRSF1A-208ENST00000536194 LCA10Q71F78 164 aa5.34□□□□□ -1.55
TNFRSF1A-208ENST00000536194 S4R3F8 94 aa5.34□□□□□ -1.55
TNFRSF1A-208ENST00000536194 C5orf47Q569G3 176 aa5.33□□□□□ -1.56
TNFRSF1A-208ENST00000536194 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
TNFRSF1A-208ENST00000536194 MP68P56378 58 aa5.32□□□□□ -1.56
TNFRSF1A-208ENST00000536194 LCE2BO14633 110 aa5.31□□□□□ -1.56
TNFRSF1A-208ENST00000536194 KRTAP3-3Q9BYR6 98 aa5.3□□□□□ -1.56
TNFRSF1A-208ENST00000536194 FAM236AA0A1B0GUQ0 79 aa5.29□□□□□ -1.56
TNFRSF1A-208ENST00000536194 FAM236BA0A1B0GV22 79 aa5.29□□□□□ -1.56
TNFRSF1A-208ENST00000536194 H3BPC8 53 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms