RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 A0A0G2JQZ4 141 aa1.75□□□□□ -2.13
MDM2-223ENST00000536089 TEX49A0A1B0GTD5 131 aa1.75□□□□□ -2.13
MDM2-223ENST00000536089 H3BT86 120 aa1.75□□□□□ -2.13
MDM2-223ENST00000536089 ERC2-IT1O76042 136 aa1.75□□□□□ -2.13
MDM2-223ENST00000536089 RHEBQ15382 184 aa1.75□□□□□ -2.13
MDM2-223ENST00000536089 NHP2Q9NX24 153 aaKnown RBP1.75□□□□□ -2.13
MDM2-223ENST00000536089 A8MUN3 132 aa1.74□□□□□ -2.13
MDM2-223ENST00000536089 F8WEM9 126 aa1.74□□□□□ -2.13
MDM2-223ENST00000536089 S100A6P06703 90 aa1.74□□□□□ -2.13
MDM2-223ENST00000536089 PLNP26678 52 aa1.74□□□□□ -2.13
MDM2-223ENST00000536089 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
MDM2-223ENST00000536089 HRCT1Q6UXD1 115 aa1.74□□□□□ -2.13
MDM2-223ENST00000536089 COPS9Q8WXC6 57 aa1.74□□□□□ -2.13
MDM2-223ENST00000536089 IFI27L1Q96BM0 104 aa1.74□□□□□ -2.13
MDM2-223ENST00000536089 SPANXDQ9BXN6 97 aa1.74□□□□□ -2.13
MDM2-223ENST00000536089 TRBV7-6A0A0J9YX20 115 aa1.73□□□□□ -2.13
MDM2-223ENST00000536089 LEPROTO15243 131 aa1.73□□□□□ -2.13
MDM2-223ENST00000536089 ELOF1P60002 83 aaKnown RBP1.73□□□□□ -2.13
MDM2-223ENST00000536089 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
MDM2-223ENST00000536089 KTN1-AS1Q86SY8 53 aa1.73□□□□□ -2.13
MDM2-223ENST00000536089 CHCHD1Q96BP2 118 aaKnown RBP1.73□□□□□ -2.13
MDM2-223ENST00000536089 SPANXCQ9NY87 97 aa1.73□□□□□ -2.13
MDM2-223ENST00000536089 FAM236DA0A1B0GTK5 79 aa1.72□□□□□ -2.13
MDM2-223ENST00000536089 FAM236CP0DP71 79 aa1.72□□□□□ -2.13
MDM2-223ENST00000536089 COX7BP24311 80 aa1.72□□□□□ -2.13
MDM2-223ENST00000536089 HIST1H4AP62805 103 aaKnown RBP1.72□□□□□ -2.13
MDM2-223ENST00000536089 Q6JHZ5 121 aa1.72□□□□□ -2.13
MDM2-223ENST00000536089 OR13C6PQ8NH95 151 aa1.72□□□□□ -2.13
MDM2-223ENST00000536089 C18orf32Q8TCD1 76 aa1.72□□□□□ -2.13
MDM2-223ENST00000536089 PRO2289Q9P1D8 64 aa1.72□□□□□ -2.13
MDM2-223ENST00000536089 IGLV5-48A0A075B6I7 105 aa1.71□□□□□ -2.14
MDM2-223ENST00000536089 TIMM17BO60830 172 aa1.71□□□□□ -2.14
MDM2-223ENST00000536089 ANKRD29Q8N6D5 301 aa1.71□□□□□ -2.14
MDM2-223ENST00000536089 SS18L2Q9UHA2 77 aa1.71□□□□□ -2.14
MDM2-223ENST00000536089 TRAV7A0A075B6U4 112 aa1.7□□□□□ -2.14
MDM2-223ENST00000536089 TRAV13-2A0A0B4J235 113 aa1.7□□□□□ -2.14
MDM2-223ENST00000536089 DPM2O94777 84 aa1.7□□□□□ -2.14
MDM2-223ENST00000536089 PMCHL1Q16048 86 aa1.7□□□□□ -2.14
MDM2-223ENST00000536089 DEFB105AQ8NG35 78 aa1.7□□□□□ -2.14
MDM2-223ENST00000536089 CLEC2BQ92478 149 aa1.7□□□□□ -2.14
MDM2-223ENST00000536089 OBSCN-AS1Q96MR7 158 aa1.7□□□□□ -2.14
MDM2-223ENST00000536089 HSPB8Q9UJY1 196 aa1.7□□□□□ -2.14
MDM2-223ENST00000536089 TRBV7-7A0A0K0K1E9 115 aa1.69□□□□□ -2.14
MDM2-223ENST00000536089 TMEM218A2RU14 115 aa1.69□□□□□ -2.14
MDM2-223ENST00000536089 LEPROTL1O95214 131 aa1.69□□□□□ -2.14
MDM2-223ENST00000536089 IGKCP01834 107 aa1.69□□□□□ -2.14
MDM2-223ENST00000536089 CLLU1Q5K131 121 aa1.69□□□□□ -2.14
MDM2-223ENST00000536089 SOSTDC1Q6X4U4 206 aa1.69□□□□□ -2.14
MDM2-223ENST00000536089 PPDPFLQ8WWR9 84 aa1.69□□□□□ -2.14
MDM2-223ENST00000536089 Q96NJ1 140 aa1.69□□□□□ -2.14
MDM2-223ENST00000536089 FLGP20930 4061 aaPredicted RBP1.69□□□□□ -2.14
MDM2-223ENST00000536089 USH2AO75445 5202 aa1.68□□□□□ -2.14
MDM2-223ENST00000536089 MT2AP02795 61 aa1.68□□□□□ -2.14
MDM2-223ENST00000536089 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
MDM2-223ENST00000536089 NDUFA5Q16718 116 aa1.68□□□□□ -2.14
MDM2-223ENST00000536089 KRTAP19-6Q3LI70 58 aa1.68□□□□□ -2.14
MDM2-223ENST00000536089 LINC00308Q8TCZ7 52 aa1.68□□□□□ -2.14
MDM2-223ENST00000536089 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 FCGBPQ9Y6R7 5405 aaPredicted RBP1.67□□□□□ -2.14
MDM2-223ENST00000536089 SNCGO76070 127 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 IFITM1P13164 125 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 HIST1H2BOP23527 126 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 HIST1H2BBP33778 126 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 HIST1H2BDP58876 126 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 NPC2P61916 151 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 HIST1H2BCP62807 126 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 HIST2H2BEQ16778 126 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.67□□□□□ -2.14
MDM2-223ENST00000536089 HIST1H2BHQ93079 126 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 HIST1H2BNQ99877 126 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 HIST1H2BMQ99879 126 aa1.67□□□□□ -2.14
MDM2-223ENST00000536089 MT1FP04733 61 aa1.66□□□□□ -2.14
MDM2-223ENST00000536089 SVBPQ8N300 66 aa1.66□□□□□ -2.14
MDM2-223ENST00000536089 OCIAD2Q56VL3 154 aa1.65□□□□□ -2.15
MDM2-223ENST00000536089 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.65□□□□□ -2.15
MDM2-223ENST00000536089 hADV29S1A0JD25 119 aa1.64□□□□□ -2.15
MDM2-223ENST00000536089 C3orf79P0CE67 100 aa1.64□□□□□ -2.15
MDM2-223ENST00000536089 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
MDM2-223ENST00000536089 BVES-AS1Q5T3Y7 98 aa1.64□□□□□ -2.15
MDM2-223ENST00000536089 Q6ZQY7 126 aa1.64□□□□□ -2.15
MDM2-223ENST00000536089 C7orf65Q6ZTY9 151 aa1.64□□□□□ -2.15
MDM2-223ENST00000536089 TEN1Q86WV5 123 aa1.64□□□□□ -2.15
MDM2-223ENST00000536089 COA5Q86WW8 74 aa1.64□□□□□ -2.15
MDM2-223ENST00000536089 C12orf57Q99622 126 aa1.64□□□□□ -2.15
MDM2-223ENST00000536089 SNHG12Q9BXW3 62 aa1.64□□□□□ -2.15
MDM2-223ENST00000536089 SYNE2Q8WXH0 6885 aaKnown RBP1.64□□□□□ -2.15
MDM2-223ENST00000536089 MACF1Q9UPN3 7388 aaKnown RBP1.63□□□□□ -2.15
MDM2-223ENST00000536089 TRGC2P03986 189 aa1.63□□□□□ -2.15
MDM2-223ENST00000536089 KRTAP12-4P60329 112 aa1.63□□□□□ -2.15
MDM2-223ENST00000536089 KRTAP13-4Q3LI77 160 aa1.63□□□□□ -2.15
MDM2-223ENST00000536089 LINC00575Q6W349 94 aa1.63□□□□□ -2.15
MDM2-223ENST00000536089 SMIM11BQ8TCY0 68 aa1.63□□□□□ -2.15
MDM2-223ENST00000536089 DSCR8Q96T75 97 aa1.63□□□□□ -2.15
MDM2-223ENST00000536089 SIGMAR1Q99720 223 aa1.63□□□□□ -2.15
MDM2-223ENST00000536089 SYS1-DBNDD2H3BUS1 97 aa1.62□□□□□ -2.15
MDM2-223ENST00000536089 APOC3P02656 99 aa1.62□□□□□ -2.15
MDM2-223ENST00000536089 FABP4P15090 132 aa1.62□□□□□ -2.15
MDM2-223ENST00000536089 FXYD2P54710 66 aa1.62□□□□□ -2.15
MDM2-223ENST00000536089 PMCHL2Q9BQD1 86 aa1.62□□□□□ -2.15
MDM2-223ENST00000536089 A0A087WSZ3 146 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms