RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
CDCA3-205ENST00000535871 FP248Q71RG6 208 aaPredicted RBP3.72□□□□□ -1.81
CDCA3-205ENST00000535871 A0A0G2JQZ4 141 aa3.71□□□□□ -1.82
CDCA3-205ENST00000535871 NDUFB1O75438 58 aa3.71□□□□□ -1.82
CDCA3-205ENST00000535871 Q96NJ1 140 aa3.71□□□□□ -1.82
CDCA3-205ENST00000535871 HERC2O95714 4834 aa3.7□□□□□ -1.82
CDCA3-205ENST00000535871 TNXBP22105 4242 aa3.7□□□□□ -1.82
CDCA3-205ENST00000535871 A8MWP4 228 aa3.7□□□□□ -1.82
CDCA3-205ENST00000535871 C1orf195Q5TG92 126 aa3.7□□□□□ -1.82
CDCA3-205ENST00000535871 MYCBP2O75592 4640 aa3.69□□□□□ -1.82
CDCA3-205ENST00000535871 HRCT1Q6UXD1 115 aa3.69□□□□□ -1.82
CDCA3-205ENST00000535871 PRR15Q8IV56 129 aa3.69□□□□□ -1.82
CDCA3-205ENST00000535871 KRTAP4-5Q9BYR2 181 aa3.69□□□□□ -1.82
CDCA3-205ENST00000535871 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
CDCA3-205ENST00000535871 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
CDCA3-205ENST00000535871 C8orf87E5RJ46 101 aa3.68□□□□□ -1.82
CDCA3-205ENST00000535871 IGKV4-1P06312 121 aa3.68□□□□□ -1.82
CDCA3-205ENST00000535871 DSCR10P59022 87 aa3.68□□□□□ -1.82
CDCA3-205ENST00000535871 A0A1B0GVX0 72 aa3.67□□□□□ -1.82
CDCA3-205ENST00000535871 IGKV2-30P06310 120 aa3.66□□□□□ -1.82
CDCA3-205ENST00000535871 SCGB1A1P11684 91 aa3.66□□□□□ -1.82
CDCA3-205ENST00000535871 IGKV3D-7A0A0C4DH55 119 aa3.65□□□□□ -1.83
CDCA3-205ENST00000535871 MT-ATP8P03928 68 aa3.65□□□□□ -1.83
CDCA3-205ENST00000535871 K7EQZ3 153 aa3.64□□□□□ -1.83
CDCA3-205ENST00000535871 HIST1H4AP62805 103 aaKnown RBP3.64□□□□□ -1.83
CDCA3-205ENST00000535871 SMIM20Q8N5G0 67 aa3.64□□□□□ -1.83
CDCA3-205ENST00000535871 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
CDCA3-205ENST00000535871 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
CDCA3-205ENST00000535871 HCG22E2RYF7 251 aa3.63□□□□□ -1.83
CDCA3-205ENST00000535871 LINC00313P59037 77 aa3.63□□□□□ -1.83
CDCA3-205ENST00000535871 KRTAP19-1Q8IUB9 90 aa3.63□□□□□ -1.83
CDCA3-205ENST00000535871 C8orf17Q9NRJ1 99 aa3.63□□□□□ -1.83
CDCA3-205ENST00000535871 TPRXLQ17RH7 258 aa3.62□□□□□ -1.83
CDCA3-205ENST00000535871 TMEM254Q8TBM7 123 aa3.62□□□□□ -1.83
CDCA3-205ENST00000535871 MMP24-AS1A0A0U1RRL7 71 aa3.61□□□□□ -1.83
CDCA3-205ENST00000535871 hDV103S1A0JD37 113 aa3.61□□□□□ -1.83
CDCA3-205ENST00000535871 DEFB116Q30KQ4 102 aa3.61□□□□□ -1.83
CDCA3-205ENST00000535871 TP53AIP1Q9HCN2 124 aa3.61□□□□□ -1.83
CDCA3-205ENST00000535871 IGLV7-46A0A075B6I9 117 aa3.6□□□□□ -1.83
CDCA3-205ENST00000535871 IGHV6-1A0A0B4J1U7 121 aa3.6□□□□□ -1.83
CDCA3-205ENST00000535871 ATOX1O00244 68 aa3.6□□□□□ -1.83
CDCA3-205ENST00000535871 CASC2Q6XLA1 102 aa3.6□□□□□ -1.83
CDCA3-205ENST00000535871 Q8N9P0 234 aaPredicted RBP3.6□□□□□ -1.83
CDCA3-205ENST00000535871 ABCA13Q86UQ4 5058 aa3.6□□□□□ -1.83
CDCA3-205ENST00000535871 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
CDCA3-205ENST00000535871 Q8N9L7 120 aa3.59□□□□□ -1.83
CDCA3-205ENST00000535871 MRPL34Q9BQ48 92 aaKnown RBP3.59□□□□□ -1.83
CDCA3-205ENST00000535871 FAM236AA0A1B0GUQ0 79 aa3.58□□□□□ -1.84
CDCA3-205ENST00000535871 FAM236BA0A1B0GV22 79 aa3.58□□□□□ -1.84
CDCA3-205ENST00000535871 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
CDCA3-205ENST00000535871 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
CDCA3-205ENST00000535871 C20orf166-AS1Q96NR2 134 aa3.58□□□□□ -1.84
CDCA3-205ENST00000535871 OCR1Q9BZK8 76 aa3.58□□□□□ -1.84
CDCA3-205ENST00000535871 A0A087WVE0 104 aa3.57□□□□□ -1.84
CDCA3-205ENST00000535871 A8MUU9 505 aa3.57□□□□□ -1.84
CDCA3-205ENST00000535871 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
CDCA3-205ENST00000535871 UQCRQO14949 82 aa3.56□□□□□ -1.84
CDCA3-205ENST00000535871 TRAV7A0A075B6U4 112 aa3.55□□□□□ -1.84
CDCA3-205ENST00000535871 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
CDCA3-205ENST00000535871 H3BPC8 53 aa3.55□□□□□ -1.84
CDCA3-205ENST00000535871 PRR4Q16378 134 aa3.55□□□□□ -1.84
CDCA3-205ENST00000535871 C5orf47Q569G3 176 aa3.55□□□□□ -1.84
CDCA3-205ENST00000535871 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
CDCA3-205ENST00000535871 RETNLBQ9BQ08 111 aa3.55□□□□□ -1.84
CDCA3-205ENST00000535871 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
CDCA3-205ENST00000535871 WFDC13Q8IUB5 93 aa3.54□□□□□ -1.84
CDCA3-205ENST00000535871 SERP2Q8N6R1 65 aa3.54□□□□□ -1.84
CDCA3-205ENST00000535871 PCLOQ9Y6V0 5065 aa3.53□□□□□ -1.84
CDCA3-205ENST00000535871 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
CDCA3-205ENST00000535871 IGKV2D-30A0A075B6S6 120 aa3.52□□□□□ -1.85
CDCA3-205ENST00000535871 TRAV22A0A0B4J277 110 aa3.52□□□□□ -1.85
CDCA3-205ENST00000535871 RPL37P61927 97 aaKnown RBP3.52□□□□□ -1.85
CDCA3-205ENST00000535871 COX7CP15954 63 aa3.5□□□□□ -1.85
CDCA3-205ENST00000535871 MP68P56378 58 aa3.5□□□□□ -1.85
CDCA3-205ENST00000535871 ZCCHC13Q8WW36 166 aaKnown RBP3.5□□□□□ -1.85
CDCA3-205ENST00000535871 ANAPC13Q9BS18 74 aa3.5□□□□□ -1.85
CDCA3-205ENST00000535871 LOC101927531A0A1B0GV80 90 aa3.49□□□□□ -1.85
CDCA3-205ENST00000535871 C9orf92A6NGG3 77 aa3.49□□□□□ -1.85
CDCA3-205ENST00000535871 NDUFS5O43920 106 aa3.49□□□□□ -1.85
CDCA3-205ENST00000535871 ATP11AUNQ6ZP68 121 aa3.49□□□□□ -1.85
CDCA3-205ENST00000535871 NDUFC1O43677 76 aa3.48□□□□□ -1.85
CDCA3-205ENST00000535871 KLKP1Q107X0 134 aa3.48□□□□□ -1.85
CDCA3-205ENST00000535871 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
CDCA3-205ENST00000535871 KRTAP4-8Q9BYQ9 185 aa3.47□□□□□ -1.85
CDCA3-205ENST00000535871 H0Y9P7 68 aa3.46□□□□□ -1.86
CDCA3-205ENST00000535871 A0A0U1RQV1 116 aa3.45□□□□□ -1.86
CDCA3-205ENST00000535871 Q5W150 140 aa3.45□□□□□ -1.86
CDCA3-205ENST00000535871 C7orf65Q6ZTY9 151 aa3.45□□□□□ -1.86
CDCA3-205ENST00000535871 KRTAP9-3Q9BYQ3 159 aa3.45□□□□□ -1.86
CDCA3-205ENST00000535871 C1orf64Q8NEQ6 169 aa3.44□□□□□ -1.86
CDCA3-205ENST00000535871 HERC1Q15751 4861 aa3.44□□□□□ -1.86
CDCA3-205ENST00000535871 CYP4F30PQ9H0H9 118 aa3.43□□□□□ -1.86
CDCA3-205ENST00000535871 C20orf197Q8N268 126 aa3.42□□□□□ -1.86
CDCA3-205ENST00000535871 LINC00208Q96KT6 92 aa3.42□□□□□ -1.86
CDCA3-205ENST00000535871 LRP2P98164 4655 aa3.41□□□□□ -1.86
CDCA3-205ENST00000535871 SPANXA2-OT1Q8N9U9 137 aa3.41□□□□□ -1.86
CDCA3-205ENST00000535871 HMCN2Q8NDA2 5059 aa3.41□□□□□ -1.86
CDCA3-205ENST00000535871 SPINK7P58062 85 aa3.4□□□□□ -1.87
CDCA3-205ENST00000535871 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
CDCA3-205ENST00000535871 PCOTHQ58A44 107 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms