RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 UQCR10Q9UDW1 63 aa6.65□□□□□ -1.34
CLSTN3-205ENST00000535452 KRTAP16-1A8MUX0 517 aa6.64□□□□□ -1.35
CLSTN3-205ENST00000535452 KRTAP10-10P60014 251 aa6.63□□□□□ -1.35
CLSTN3-205ENST00000535452 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
CLSTN3-205ENST00000535452 NOTCH2NLQ7Z3S9 236 aa6.61□□□□□ -1.35
CLSTN3-205ENST00000535452 ZCCHC13Q8WW36 166 aaKnown RBP6.61□□□□□ -1.35
CLSTN3-205ENST00000535452 BAALC-AS2P0C853 105 aa6.6□□□□□ -1.35
CLSTN3-205ENST00000535452 HRES1P13985 223 aa6.6□□□□□ -1.35
CLSTN3-205ENST00000535452 JMJD7-PLA2G4BH0Y9G9 81 aa6.59□□□□□ -1.35
CLSTN3-205ENST00000535452 SPINK7P58062 85 aa6.58□□□□□ -1.36
CLSTN3-205ENST00000535452 A0A1B0GW54 56 aa6.57□□□□□ -1.36
CLSTN3-205ENST00000535452 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
CLSTN3-205ENST00000535452 PDE6GP18545 87 aa6.57□□□□□ -1.36
CLSTN3-205ENST00000535452 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
CLSTN3-205ENST00000535452 MT2AP02795 61 aa6.56□□□□□ -1.36
CLSTN3-205ENST00000535452 ATXN8Q156A1 80 aa6.56□□□□□ -1.36
CLSTN3-205ENST00000535452 PYY3Q5JQD4 70 aa6.56□□□□□ -1.36
CLSTN3-205ENST00000535452 MPLKIPQ8TAP9 179 aa6.56□□□□□ -1.36
CLSTN3-205ENST00000535452 Q6ZQT0 140 aa6.55□□□□□ -1.36
CLSTN3-205ENST00000535452 M0R143 59 aa6.54□□□□□ -1.36
CLSTN3-205ENST00000535452 A8MWP4 228 aa6.53□□□□□ -1.36
CLSTN3-205ENST00000535452 WFDC13Q8IUB5 93 aa6.53□□□□□ -1.36
CLSTN3-205ENST00000535452 C8orf17Q9NRJ1 99 aa6.51□□□□□ -1.37
CLSTN3-205ENST00000535452 NREPQ16612 68 aa6.5□□□□□ -1.37
CLSTN3-205ENST00000535452 Q8N9P0 234 aaPredicted RBP6.5□□□□□ -1.37
CLSTN3-205ENST00000535452 MT1FP04733 61 aa6.49□□□□□ -1.37
CLSTN3-205ENST00000535452 Q6ZVQ6 151 aa6.49□□□□□ -1.37
CLSTN3-205ENST00000535452 LOC110117498A0A087WWA1 95 aa6.48□□□□□ -1.37
CLSTN3-205ENST00000535452 NDUFS5O43920 106 aa6.48□□□□□ -1.37
CLSTN3-205ENST00000535452 IGKV3D-7A0A0C4DH55 119 aa6.47□□□□□ -1.37
CLSTN3-205ENST00000535452 TMA7Q9Y2S6 64 aaKnown RBP6.47□□□□□ -1.37
CLSTN3-205ENST00000535452 USH2AO75445 5202 aa6.47□□□□□ -1.37
CLSTN3-205ENST00000535452 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
CLSTN3-205ENST00000535452 C14orf132Q9NPU4 83 aa6.44□□□□□ -1.38
CLSTN3-205ENST00000535452 PRR15Q8IV56 129 aa6.43□□□□□ -1.38
CLSTN3-205ENST00000535452 TMEM254Q8TBM7 123 aa6.43□□□□□ -1.38
CLSTN3-205ENST00000535452 MRPL34Q9BQ48 92 aaKnown RBP6.43□□□□□ -1.38
CLSTN3-205ENST00000535452 KRTAP9-3Q9BYQ3 159 aa6.43□□□□□ -1.38
CLSTN3-205ENST00000535452 LCE2BO14633 110 aa6.41□□□□□ -1.38
CLSTN3-205ENST00000535452 hDV103S1A0JD37 113 aa6.4□□□□□ -1.38
CLSTN3-205ENST00000535452 SSPOA2VEC9 5147 aa6.4□□□□□ -1.39
CLSTN3-205ENST00000535452 H1FX-AS1Q4G0G2 97 aa6.39□□□□□ -1.39
CLSTN3-205ENST00000535452 NAA38Q9BRA0 125 aaKnown RBP6.39□□□□□ -1.39
CLSTN3-205ENST00000535452 TSTD3H0UI37 97 aa6.38□□□□□ -1.39
CLSTN3-205ENST00000535452 IGKV2D-30A0A075B6S6 120 aa6.36□□□□□ -1.39
CLSTN3-205ENST00000535452 BPY2O14599 106 aa6.36□□□□□ -1.39
CLSTN3-205ENST00000535452 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
CLSTN3-205ENST00000535452 C7orf65Q6ZTY9 151 aa6.36□□□□□ -1.39
CLSTN3-205ENST00000535452 MMP24-AS1A0A0U1RRL7 71 aa6.34□□□□□ -1.39
CLSTN3-205ENST00000535452 BATFQ16520 125 aa6.34□□□□□ -1.39
CLSTN3-205ENST00000535452 K7EQZ3 153 aa6.32□□□□□ -1.4
CLSTN3-205ENST00000535452 FCGBPQ9Y6R7 5405 aaPredicted RBP6.31□□□□□ -1.4
CLSTN3-205ENST00000535452 H3BT86 120 aa6.31□□□□□ -1.4
CLSTN3-205ENST00000535452 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
CLSTN3-205ENST00000535452 CASC2Q6XLA1 102 aa6.29□□□□□ -1.4
CLSTN3-205ENST00000535452 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
CLSTN3-205ENST00000535452 FAM236AA0A1B0GUQ0 79 aa6.27□□□□□ -1.41
CLSTN3-205ENST00000535452 FAM236BA0A1B0GV22 79 aa6.27□□□□□ -1.41
CLSTN3-205ENST00000535452 SMIM6P0DI80 62 aa6.27□□□□□ -1.41
CLSTN3-205ENST00000535452 HCG22E2RYF7 251 aa6.26□□□□□ -1.41
CLSTN3-205ENST00000535452 CXCL6P80162 114 aa6.26□□□□□ -1.41
CLSTN3-205ENST00000535452 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
CLSTN3-205ENST00000535452 C9orf118A6NHY6 69 aa6.22□□□□□ -1.41
CLSTN3-205ENST00000535452 UBL5Q9BZL1 73 aa6.22□□□□□ -1.41
CLSTN3-205ENST00000535452 A0A1W2PPM0 123 aa6.2□□□□□ -1.42
CLSTN3-205ENST00000535452 C4orf26Q17RF5 130 aa6.2□□□□□ -1.42
CLSTN3-205ENST00000535452 Q5W150 140 aa6.18□□□□□ -1.42
CLSTN3-205ENST00000535452 Q8N9L7 120 aa6.18□□□□□ -1.42
CLSTN3-205ENST00000535452 C5orf47Q569G3 176 aa6.17□□□□□ -1.42
CLSTN3-205ENST00000535452 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
CLSTN3-205ENST00000535452 SPCS1Q9Y6A9 102 aa6.16□□□□□ -1.42
CLSTN3-205ENST00000535452 S4R3F8 94 aa6.16□□□□□ -1.42
CLSTN3-205ENST00000535452 TAX1BP3O14907 124 aa6.12□□□□□ -1.43
CLSTN3-205ENST00000535452 TP53AIP1Q9HCN2 124 aa6.12□□□□□ -1.43
CLSTN3-205ENST00000535452 KRTAP6-3Q3LI67 103 aa6.11□□□□□ -1.43
CLSTN3-205ENST00000535452 C1orf64Q8NEQ6 169 aa6.11□□□□□ -1.43
CLSTN3-205ENST00000535452 A6NN06 94 aa6.1□□□□□ -1.43
CLSTN3-205ENST00000535452 Q5VV11 94 aa6.09□□□□□ -1.43
CLSTN3-205ENST00000535452 IMUPQ9GZP8 106 aa6.04□□□□□ -1.44
CLSTN3-205ENST00000535452 COL5A1-AS1Q5SY13 56 aa6.02□□□□□ -1.45
CLSTN3-205ENST00000535452 LCA10Q71F78 164 aa6.02□□□□□ -1.45
CLSTN3-205ENST00000535452 GTF2H5Q6ZYL4 71 aa5.99□□□□□ -1.45
CLSTN3-205ENST00000535452 KLKP1Q107X0 134 aa5.98□□□□□ -1.45
CLSTN3-205ENST00000535452 K7EP34 96 aa5.97□□□□□ -1.45
CLSTN3-205ENST00000535452 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
CLSTN3-205ENST00000535452 SMCPP49901 116 aaPredicted RBP5.96□□□□□ -1.46
CLSTN3-205ENST00000535452 SPRR2GQ9BYE4 73 aa5.95□□□□□ -1.46
CLSTN3-205ENST00000535452 LOC101927531A0A1B0GV80 90 aa5.94□□□□□ -1.46
CLSTN3-205ENST00000535452 LOC105371267A0A1B0GV96 52 aa5.94□□□□□ -1.46
CLSTN3-205ENST00000535452 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
CLSTN3-205ENST00000535452 TRAV22A0A0B4J277 110 aa5.93□□□□□ -1.46
CLSTN3-205ENST00000535452 F8W1H4 67 aa5.91□□□□□ -1.46
CLSTN3-205ENST00000535452 CYP4F30PQ9H0H9 118 aa5.91□□□□□ -1.46
CLSTN3-205ENST00000535452 NDUFC1O43677 76 aa5.9□□□□□ -1.46
CLSTN3-205ENST00000535452 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.46
CLSTN3-205ENST00000535452 PRO0461Q9UI25 63 aa5.9□□□□□ -1.46
CLSTN3-205ENST00000535452 MT1BP07438 61 aa5.89□□□□□ -1.47
CLSTN3-205ENST00000535452 ATOX1O00244 68 aa5.88□□□□□ -1.47
CLSTN3-205ENST00000535452 ACYP1P07311 99 aa5.86□□□□□ -1.47
CLSTN3-205ENST00000535452 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms