RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 UBE2DNLQ8IWF7 75 aa3.58□□□□□ -1.84
TNFRSF1A-206ENST00000535038 LINC00472Q9H8W2 130 aa3.58□□□□□ -1.84
TNFRSF1A-206ENST00000535038 FRAS1Q86XX4 4008 aa3.58□□□□□ -1.84
TNFRSF1A-206ENST00000535038 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.57□□□□□ -1.84
TNFRSF1A-206ENST00000535038 NUPR2A6NF83 97 aa3.57□□□□□ -1.84
TNFRSF1A-206ENST00000535038 HCG22E2RYF7 251 aa3.57□□□□□ -1.84
TNFRSF1A-206ENST00000535038 PSCAO43653 123 aa3.57□□□□□ -1.84
TNFRSF1A-206ENST00000535038 LINC00483Q53H64 154 aa3.57□□□□□ -1.84
TNFRSF1A-206ENST00000535038 FP248Q71RG6 208 aaPredicted RBP3.57□□□□□ -1.84
TNFRSF1A-206ENST00000535038 SPACA4Q8TDM5 124 aa3.57□□□□□ -1.84
TNFRSF1A-206ENST00000535038 HIGD2AQ9BW72 106 aa3.57□□□□□ -1.84
TNFRSF1A-206ENST00000535038 LINC00474Q9P2X8 69 aa3.57□□□□□ -1.84
TNFRSF1A-206ENST00000535038 SACSQ9NZJ4 4579 aa3.56□□□□□ -1.84
TNFRSF1A-206ENST00000535038 A0A087WSZ3 146 aa3.56□□□□□ -1.84
TNFRSF1A-206ENST00000535038 SMIM26A0A096LP01 95 aa3.56□□□□□ -1.84
TNFRSF1A-206ENST00000535038 UBE2AP49459 152 aa3.56□□□□□ -1.84
TNFRSF1A-206ENST00000535038 ASB16-AS1Q495Z4 193 aa3.56□□□□□ -1.84
TNFRSF1A-206ENST00000535038 C5orf47Q569G3 176 aa3.56□□□□□ -1.84
TNFRSF1A-206ENST00000535038 Q6ZR54 194 aa3.56□□□□□ -1.84
TNFRSF1A-206ENST00000535038 FAT2Q9NYQ8 4349 aa3.56□□□□□ -1.84
TNFRSF1A-206ENST00000535038 SEC61BP60468 96 aaKnown RBP3.55□□□□□ -1.84
TNFRSF1A-206ENST00000535038 C4orf26Q17RF5 130 aa3.55□□□□□ -1.84
TNFRSF1A-206ENST00000535038 PRR15Q8IV56 129 aa3.55□□□□□ -1.84
TNFRSF1A-206ENST00000535038 A0A087WTM6 91 aa3.54□□□□□ -1.84
TNFRSF1A-206ENST00000535038 RPL37AP61513 92 aaKnown RBP3.54□□□□□ -1.84
TNFRSF1A-206ENST00000535038 Q96NJ1 140 aa3.54□□□□□ -1.84
TNFRSF1A-206ENST00000535038 CYP4F30PQ9H0H9 118 aa3.54□□□□□ -1.84
TNFRSF1A-206ENST00000535038 TENM2Q9NT68 2774 aa3.54□□□□□ -1.84
TNFRSF1A-206ENST00000535038 A8MWP4 228 aa3.53□□□□□ -1.84
TNFRSF1A-206ENST00000535038 PLAC8Q9NZF1 115 aa3.53□□□□□ -1.84
TNFRSF1A-206ENST00000535038 SRRM2Q9UQ35 2752 aaKnown RBP3.52□□□□□ -1.85
TNFRSF1A-206ENST00000535038 DNHD1Q96M86 4753 aa3.52□□□□□ -1.85
TNFRSF1A-206ENST00000535038 MMP24-AS1A0A0U1RRL7 71 aa3.52□□□□□ -1.85
TNFRSF1A-206ENST00000535038 hDV103S1A0JD37 113 aa3.52□□□□□ -1.85
TNFRSF1A-206ENST00000535038 FAM229BQ4G0N7 80 aa3.52□□□□□ -1.85
TNFRSF1A-206ENST00000535038 PKD1P98161 4303 aa3.52□□□□□ -1.85
TNFRSF1A-206ENST00000535038 H3BPC8 53 aa3.51□□□□□ -1.85
TNFRSF1A-206ENST00000535038 DEFB116Q30KQ4 102 aa3.51□□□□□ -1.85
TNFRSF1A-206ENST00000535038 HRCT1Q6UXD1 115 aa3.51□□□□□ -1.85
TNFRSF1A-206ENST00000535038 TRAV22A0A0B4J277 110 aa3.5□□□□□ -1.85
TNFRSF1A-206ENST00000535038 CASC2Q6XLA1 102 aa3.5□□□□□ -1.85
TNFRSF1A-206ENST00000535038 WFDC13Q8IUB5 93 aa3.5□□□□□ -1.85
TNFRSF1A-206ENST00000535038 LRP1BQ9NZR2 4599 aa3.5□□□□□ -1.85
TNFRSF1A-206ENST00000535038 RTL8CO15255 209 aa3.49□□□□□ -1.85
TNFRSF1A-206ENST00000535038 MOBPQ13875 183 aa3.49□□□□□ -1.85
TNFRSF1A-206ENST00000535038 SPANXA2-OT1Q8N9U9 137 aa3.49□□□□□ -1.85
TNFRSF1A-206ENST00000535038 PSORS1C2Q9UIG4 136 aa3.49□□□□□ -1.85
TNFRSF1A-206ENST00000535038 ZNF861PO60384 105 aa3.48□□□□□ -1.85
TNFRSF1A-206ENST00000535038 C1orf64Q8NEQ6 169 aa3.48□□□□□ -1.85
TNFRSF1A-206ENST00000535038 ZNF706Q9Y5V0 76 aaPredicted RBP3.48□□□□□ -1.85
TNFRSF1A-206ENST00000535038 NDUFB1O75438 58 aa3.47□□□□□ -1.85
TNFRSF1A-206ENST00000535038 MP68P56378 58 aa3.47□□□□□ -1.85
TNFRSF1A-206ENST00000535038 FBN3Q75N90 2809 aa3.47□□□□□ -1.85
TNFRSF1A-206ENST00000535038 PKHD1L1Q86WI1 4243 aa3.46□□□□□ -1.86
TNFRSF1A-206ENST00000535038 H0Y9P7 68 aa3.46□□□□□ -1.86
TNFRSF1A-206ENST00000535038 Q1T7F1 81 aa3.46□□□□□ -1.86
TNFRSF1A-206ENST00000535038 LINC00336Q6ZUF6 198 aa3.46□□□□□ -1.86
TNFRSF1A-206ENST00000535038 NOTCH2NLQ7Z3S9 236 aa3.46□□□□□ -1.86
TNFRSF1A-206ENST00000535038 C8orf17Q9NRJ1 99 aa3.46□□□□□ -1.86
TNFRSF1A-206ENST00000535038 MEGF8Q7Z7M0 2845 aa3.45□□□□□ -1.86
TNFRSF1A-206ENST00000535038 IGLV9-49A0A0B4J1Y8 123 aa3.45□□□□□ -1.86
TNFRSF1A-206ENST00000535038 A0A1B0GVX0 72 aa3.45□□□□□ -1.86
TNFRSF1A-206ENST00000535038 KRTAP16-1A8MUX0 517 aa3.45□□□□□ -1.86
TNFRSF1A-206ENST00000535038 IGLV7-43P04211 117 aa3.45□□□□□ -1.86
TNFRSF1A-206ENST00000535038 LINC00208Q96KT6 92 aa3.45□□□□□ -1.86
TNFRSF1A-206ENST00000535038 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
TNFRSF1A-206ENST00000535038 CD164Q04900 197 aa3.44□□□□□ -1.86
TNFRSF1A-206ENST00000535038 KRTAP13-3Q3SY46 172 aa3.44□□□□□ -1.86
TNFRSF1A-206ENST00000535038 TP53AIP1Q9HCN2 124 aa3.44□□□□□ -1.86
TNFRSF1A-206ENST00000535038 HYDINQ4G0P3 5121 aa3.44□□□□□ -1.86
TNFRSF1A-206ENST00000535038 DYNC1H1Q14204 4646 aaKnown RBP3.44□□□□□ -1.86
TNFRSF1A-206ENST00000535038 C1orf134Q5TEV5 83 aa3.43□□□□□ -1.86
TNFRSF1A-206ENST00000535038 Q6ZSA8 131 aa3.43□□□□□ -1.86
TNFRSF1A-206ENST00000535038 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
TNFRSF1A-206ENST00000535038 VPS13BQ7Z7G8 4022 aa3.43□□□□□ -1.86
TNFRSF1A-206ENST00000535038 IGLV7-46A0A075B6I9 117 aa3.42□□□□□ -1.86
TNFRSF1A-206ENST00000535038 A0A087X002 238 aa3.42□□□□□ -1.86
TNFRSF1A-206ENST00000535038 ANAPC11Q9NYG5 84 aa3.42□□□□□ -1.86
TNFRSF1A-206ENST00000535038 SSBP3-AS1Q7Z2R9 100 aa3.41□□□□□ -1.86
TNFRSF1A-206ENST00000535038 MRPL34Q9BQ48 92 aaKnown RBP3.41□□□□□ -1.86
TNFRSF1A-206ENST00000535038 APOBP04114 4563 aaKnown RBP3.41□□□□□ -1.86
TNFRSF1A-206ENST00000535038 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
TNFRSF1A-206ENST00000535038 TGP01266 2768 aa3.4□□□□□ -1.87
TNFRSF1A-206ENST00000535038 PRR4Q16378 134 aa3.39□□□□□ -1.87
TNFRSF1A-206ENST00000535038 CIRBP-AS1Q8TBR5 109 aa3.39□□□□□ -1.87
TNFRSF1A-206ENST00000535038 IGHV6-1A0A0B4J1U7 121 aa3.38□□□□□ -1.87
TNFRSF1A-206ENST00000535038 KRTAP13-2Q52LG2 175 aa3.38□□□□□ -1.87
TNFRSF1A-206ENST00000535038 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
TNFRSF1A-206ENST00000535038 C1orf195Q5TG92 126 aa3.38□□□□□ -1.87
TNFRSF1A-206ENST00000535038 C8orf87E5RJ46 101 aa3.37□□□□□ -1.87
TNFRSF1A-206ENST00000535038 KRTAP1-4P0C5Y4 121 aa3.37□□□□□ -1.87
TNFRSF1A-206ENST00000535038 KRTAP10-1P60331 282 aa3.37□□□□□ -1.87
TNFRSF1A-206ENST00000535038 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
TNFRSF1A-206ENST00000535038 Q5W150 140 aa3.37□□□□□ -1.87
TNFRSF1A-206ENST00000535038 V9GYY9 64 aa3.37□□□□□ -1.87
TNFRSF1A-206ENST00000535038 LOC101927531A0A1B0GV80 90 aa3.36□□□□□ -1.87
TNFRSF1A-206ENST00000535038 Q5VV11 94 aa3.36□□□□□ -1.87
TNFRSF1A-206ENST00000535038 COA5Q86WW8 74 aa3.36□□□□□ -1.87
TNFRSF1A-206ENST00000535038 CDK2AP2O75956 126 aa3.35□□□□□ -1.87
TNFRSF1A-206ENST00000535038 LY6G6CO95867 125 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms