RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 PCOTHQ58A44 107 aa5.43□□□□□ -1.54
SORL1-213ENST00000534754 PHF5AQ7RTV0 110 aaKnown RBP5.43□□□□□ -1.54
SORL1-213ENST00000534754 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
SORL1-213ENST00000534754 KRTAP11-1Q8IUC1 163 aa5.43□□□□□ -1.54
SORL1-213ENST00000534754 NDUFS5O43920 106 aa5.42□□□□□ -1.54
SORL1-213ENST00000534754 MOBPQ13875 183 aa5.42□□□□□ -1.54
SORL1-213ENST00000534754 LINC01558Q9Y6Z2 57 aa5.42□□□□□ -1.54
SORL1-213ENST00000534754 DNAH11Q96DT5 4516 aa5.42□□□□□ -1.54
SORL1-213ENST00000534754 ASB16-AS1Q495Z4 193 aa5.42□□□□□ -1.54
SORL1-213ENST00000534754 A6NN06 94 aa5.41□□□□□ -1.54
SORL1-213ENST00000534754 CHTF8P0CG12 524 aa5.4□□□□□ -1.54
SORL1-213ENST00000534754 SPAG11AQ6PDA7 123 aa5.4□□□□□ -1.54
SORL1-213ENST00000534754 PLAC8Q9NZF1 115 aa5.4□□□□□ -1.54
SORL1-213ENST00000534754 PKHD1P08F94 4074 aa5.39□□□□□ -1.55
SORL1-213ENST00000534754 C14orf177Q52M58 125 aa5.39□□□□□ -1.55
SORL1-213ENST00000534754 C8orf17Q9NRJ1 99 aa5.39□□□□□ -1.55
SORL1-213ENST00000534754 RBM12B-AS1Q9P1G2 102 aa5.39□□□□□ -1.55
SORL1-213ENST00000534754 A0A087WTM6 91 aa5.39□□□□□ -1.55
SORL1-213ENST00000534754 Q96NJ1 140 aa5.39□□□□□ -1.55
SORL1-213ENST00000534754 HECTD4Q9Y4D8 3996 aa5.39□□□□□ -1.55
SORL1-213ENST00000534754 A0A1B0GVY2 172 aa5.38□□□□□ -1.55
SORL1-213ENST00000534754 SRRM2Q9UQ35 2752 aaKnown RBP5.37□□□□□ -1.55
SORL1-213ENST00000534754 HRES1P13985 223 aa5.36□□□□□ -1.55
SORL1-213ENST00000534754 KRTAP10-2P60368 255 aa5.36□□□□□ -1.55
SORL1-213ENST00000534754 DNAH5Q8TE73 4624 aa5.36□□□□□ -1.55
SORL1-213ENST00000534754 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
SORL1-213ENST00000534754 KRTAP13-1Q8IUC0 172 aa5.36□□□□□ -1.55
SORL1-213ENST00000534754 IGLV9-49A0A0B4J1Y8 123 aa5.35□□□□□ -1.55
SORL1-213ENST00000534754 A0A1B0GVX0 72 aa5.35□□□□□ -1.55
SORL1-213ENST00000534754 C7orf65Q6ZTY9 151 aa5.35□□□□□ -1.55
SORL1-213ENST00000534754 IGHV6-1A0A0B4J1U7 121 aa5.35□□□□□ -1.55
SORL1-213ENST00000534754 CDK2AP2O75956 126 aa5.35□□□□□ -1.55
SORL1-213ENST00000534754 MRPL34Q9BQ48 92 aaKnown RBP5.34□□□□□ -1.55
SORL1-213ENST00000534754 SPINK7P58062 85 aa5.33□□□□□ -1.56
SORL1-213ENST00000534754 LINC00483Q53H64 154 aa5.31□□□□□ -1.56
SORL1-213ENST00000534754 DYNC1H1Q14204 4646 aaKnown RBP5.31□□□□□ -1.56
SORL1-213ENST00000534754 ZNF706Q9Y5V0 76 aaPredicted RBP5.29□□□□□ -1.56
SORL1-213ENST00000534754 LRP1BQ9NZR2 4599 aa5.29□□□□□ -1.56
SORL1-213ENST00000534754 IGLV5-52A0A0A0MRZ9 124 aa5.29□□□□□ -1.56
SORL1-213ENST00000534754 PANO1I0J062 215 aa5.29□□□□□ -1.56
SORL1-213ENST00000534754 KRTAP10-1P60331 282 aa5.28□□□□□ -1.56
SORL1-213ENST00000534754 A0A087X002 238 aa5.27□□□□□ -1.57
SORL1-213ENST00000534754 NOTCH2NLQ7Z3S9 236 aa5.27□□□□□ -1.57
SORL1-213ENST00000534754 PRR26Q8N8Z3 221 aa5.27□□□□□ -1.57
SORL1-213ENST00000534754 KRTAP3-3Q9BYR6 98 aa5.27□□□□□ -1.57
SORL1-213ENST00000534754 KRTAP3-2Q9BYR7 98 aa5.27□□□□□ -1.57
SORL1-213ENST00000534754 ACYP2P14621 99 aa5.26□□□□□ -1.57
SORL1-213ENST00000534754 SPACA4Q8TDM5 124 aa5.25□□□□□ -1.57
SORL1-213ENST00000534754 DNAH8Q96JB1 4490 aa5.25□□□□□ -1.57
SORL1-213ENST00000534754 APOBP04114 4563 aaKnown RBP5.25□□□□□ -1.57
SORL1-213ENST00000534754 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
SORL1-213ENST00000534754 Q5W150 140 aa5.24□□□□□ -1.57
SORL1-213ENST00000534754 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.24□□□□□ -1.57
SORL1-213ENST00000534754 Q6ZSA8 131 aa5.23□□□□□ -1.57
SORL1-213ENST00000534754 KIAA1109Q2LD37 5005 aa5.23□□□□□ -1.57
SORL1-213ENST00000534754 SPINK6Q6UWN8 80 aa5.21□□□□□ -1.57
SORL1-213ENST00000534754 BIRC6Q9NR09 4857 aa5.21□□□□□ -1.58
SORL1-213ENST00000534754 LINC00313P59037 77 aa5.21□□□□□ -1.58
SORL1-213ENST00000534754 DMAC1Q96GE9 116 aa5.21□□□□□ -1.58
SORL1-213ENST00000534754 ANAPC11Q9NYG5 84 aa5.21□□□□□ -1.58
SORL1-213ENST00000534754 PSORS1C2Q9UIG4 136 aa5.2□□□□□ -1.58
SORL1-213ENST00000534754 ZNF861PO60384 105 aa5.2□□□□□ -1.58
SORL1-213ENST00000534754 KRTAP17-1Q9BYP8 105 aa5.19□□□□□ -1.58
SORL1-213ENST00000534754 HSPG2P98160 4391 aa5.19□□□□□ -1.58
SORL1-213ENST00000534754 C8orf87E5RJ46 101 aa5.19□□□□□ -1.58
SORL1-213ENST00000534754 A0A1B0GU69 56 aa5.18□□□□□ -1.58
SORL1-213ENST00000534754 CIRBP-AS1Q8TBR5 109 aa5.18□□□□□ -1.58
SORL1-213ENST00000534754 RYR1P21817 5038 aa5.18□□□□□ -1.58
SORL1-213ENST00000534754 PLA2G1BP04054 148 aaKnown RBP5.17□□□□□ -1.58
SORL1-213ENST00000534754 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
SORL1-213ENST00000534754 FAM229AH3BQW9 127 aa5.16□□□□□ -1.58
SORL1-213ENST00000534754 SPATA8Q6RVD6 105 aa5.16□□□□□ -1.58
SORL1-213ENST00000534754 FAT1Q14517 4588 aa5.15□□□□□ -1.58
SORL1-213ENST00000534754 SMR3BP02814 79 aaPredicted RBP5.13□□□□□ -1.59
SORL1-213ENST00000534754 IGKV2-30P06310 120 aa5.13□□□□□ -1.59
SORL1-213ENST00000534754 UQCR11O14957 56 aa5.12□□□□□ -1.59
SORL1-213ENST00000534754 MIR22HGQ0VDD5 57 aa5.12□□□□□ -1.59
SORL1-213ENST00000534754 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
SORL1-213ENST00000534754 SSBP3-AS1Q7Z2R9 100 aa5.11□□□□□ -1.59
SORL1-213ENST00000534754 VPS13BQ7Z7G8 4022 aa5.1□□□□□ -1.59
SORL1-213ENST00000534754 HERC2O95714 4834 aa5.1□□□□□ -1.59
SORL1-213ENST00000534754 IGLV7-43P04211 117 aa5.1□□□□□ -1.59
SORL1-213ENST00000534754 RETNLBQ9BQ08 111 aa5.1□□□□□ -1.59
SORL1-213ENST00000534754 LINC01554Q52M75 96 aa5.09□□□□□ -1.59
SORL1-213ENST00000534754 KRTAP10-4P60372 401 aaPredicted RBP5.09□□□□□ -1.59
SORL1-213ENST00000534754 KRTAP4-5Q9BYR2 181 aa5.08□□□□□ -1.6
SORL1-213ENST00000534754 Q8N1X5 172 aa5.07□□□□□ -1.6
SORL1-213ENST00000534754 Q5VSD8 79 aa5.07□□□□□ -1.6
SORL1-213ENST00000534754 FLG2Q5D862 2391 aaPredicted RBP5.05□□□□□ -1.6
SORL1-213ENST00000534754 C4orf48Q5BLP8 95 aa5.04□□□□□ -1.6
SORL1-213ENST00000534754 IGKV2D-30A0A075B6S6 120 aa5.04□□□□□ -1.6
SORL1-213ENST00000534754 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
SORL1-213ENST00000534754 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
SORL1-213ENST00000534754 PKHD1L1Q86WI1 4243 aa5.01□□□□□ -1.61
SORL1-213ENST00000534754 CSAG1Q6PB30 78 aa5□□□□□ -1.61
SORL1-213ENST00000534754 MYCBP2O75592 4640 aa4.99□□□□□ -1.61
SORL1-213ENST00000534754 KRTAP13-2Q52LG2 175 aa4.99□□□□□ -1.61
SORL1-213ENST00000534754 LRP1Q07954 4544 aaKnown RBP4.98□□□□□ -1.61
SORL1-213ENST00000534754 PCLOQ9Y6V0 5065 aa4.95□□□□□ -1.62
SORL1-213ENST00000534754 SPINK1P00995 79 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms