RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 A0A087WSZ3 146 aa4.78□□□□□ -1.64
CCDC90B-219ENST00000534753 Q6ZVQ6 151 aa4.78□□□□□ -1.64
CCDC90B-219ENST00000534753 SS18L2Q9UHA2 77 aa4.78□□□□□ -1.64
CCDC90B-219ENST00000534753 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.77□□□□□ -1.65
CCDC90B-219ENST00000534753 ANKRD29Q8N6D5 301 aa4.77□□□□□ -1.65
CCDC90B-219ENST00000534753 Q96NJ1 140 aa4.76□□□□□ -1.65
CCDC90B-219ENST00000534753 Q6Q795 121 aa4.75□□□□□ -1.65
CCDC90B-219ENST00000534753 SIGMAR1Q99720 223 aa4.75□□□□□ -1.65
CCDC90B-219ENST00000534753 A0A1W2PNM2 257 aa4.74□□□□□ -1.65
CCDC90B-219ENST00000534753 TMEM256-PLSCR3K7ERE1 68 aa4.74□□□□□ -1.65
CCDC90B-219ENST00000534753 ATP11AUNQ6ZP68 121 aa4.74□□□□□ -1.65
CCDC90B-219ENST00000534753 VPS25Q9BRG1 176 aa4.74□□□□□ -1.65
CCDC90B-219ENST00000534753 DEFB116Q30KQ4 102 aa4.73□□□□□ -1.65
CCDC90B-219ENST00000534753 COX6B2Q6YFQ2 88 aa4.73□□□□□ -1.65
CCDC90B-219ENST00000534753 NAA38Q9BRA0 125 aaKnown RBP4.73□□□□□ -1.65
CCDC90B-219ENST00000534753 H3BQ85 93 aa4.72□□□□□ -1.65
CCDC90B-219ENST00000534753 CCKP06307 115 aa4.72□□□□□ -1.65
CCDC90B-219ENST00000534753 DSCR10P59022 87 aa4.72□□□□□ -1.65
CCDC90B-219ENST00000534753 TRACP01848 142 aa4.71□□□□□ -1.66
CCDC90B-219ENST00000534753 IGKV4-1P06312 121 aa4.71□□□□□ -1.66
CCDC90B-219ENST00000534753 BAALC-AS2P0C853 105 aa4.7□□□□□ -1.66
CCDC90B-219ENST00000534753 TRBV7-4A0A0J9YYF1 115 aa4.69□□□□□ -1.66
CCDC90B-219ENST00000534753 M0R143 59 aa4.69□□□□□ -1.66
CCDC90B-219ENST00000534753 M0R2T5 61 aa4.69□□□□□ -1.66
CCDC90B-219ENST00000534753 RBM3P98179 157 aaKnown RBP4.69□□□□□ -1.66
CCDC90B-219ENST00000534753 BATFQ16520 125 aa4.69□□□□□ -1.66
CCDC90B-219ENST00000534753 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
CCDC90B-219ENST00000534753 MT1HP80294 61 aa4.68□□□□□ -1.66
CCDC90B-219ENST00000534753 DSCR8Q96T75 97 aa4.68□□□□□ -1.66
CCDC90B-219ENST00000534753 IGHV6-1A0A0B4J1U7 121 aa4.67□□□□□ -1.66
CCDC90B-219ENST00000534753 SMIM6P0DI80 62 aa4.67□□□□□ -1.66
CCDC90B-219ENST00000534753 LINC00313P59037 77 aa4.67□□□□□ -1.66
CCDC90B-219ENST00000534753 ATXN8Q156A1 80 aa4.66□□□□□ -1.66
CCDC90B-219ENST00000534753 C9JAW5 83 aa4.65□□□□□ -1.67
CCDC90B-219ENST00000534753 C20orf166-AS1Q96NR2 134 aa4.65□□□□□ -1.67
CCDC90B-219ENST00000534753 A8MUU9 505 aa4.64□□□□□ -1.67
CCDC90B-219ENST00000534753 TSTD3H0UI37 97 aa4.64□□□□□ -1.67
CCDC90B-219ENST00000534753 LINC00472Q9H8W2 130 aa4.64□□□□□ -1.67
CCDC90B-219ENST00000534753 TRBV20-1A0A075B6N2 111 aa4.61□□□□□ -1.67
CCDC90B-219ENST00000534753 A0A1B0GVX0 72 aa4.6□□□□□ -1.67
CCDC90B-219ENST00000534753 KRTAP16-1A8MUX0 517 aa4.6□□□□□ -1.67
CCDC90B-219ENST00000534753 JMJD7-PLA2G4BH0Y9G9 81 aa4.6□□□□□ -1.67
CCDC90B-219ENST00000534753 LYRM7Q5U5X0 104 aa4.6□□□□□ -1.67
CCDC90B-219ENST00000534753 C14orf132Q9NPU4 83 aa4.6□□□□□ -1.67
CCDC90B-219ENST00000534753 LOC105371267A0A1B0GV96 52 aa4.59□□□□□ -1.67
CCDC90B-219ENST00000534753 FAM236DA0A1B0GTK5 79 aa4.58□□□□□ -1.68
CCDC90B-219ENST00000534753 FAM236CP0DP71 79 aa4.58□□□□□ -1.68
CCDC90B-219ENST00000534753 KRTAP10-6P60371 365 aaPredicted RBP4.58□□□□□ -1.68
CCDC90B-219ENST00000534753 Q6ZQT0 140 aa4.58□□□□□ -1.68
CCDC90B-219ENST00000534753 MTURNQ8N3F0 131 aa4.58□□□□□ -1.68
CCDC90B-219ENST00000534753 C8orf87E5RJ46 101 aa4.57□□□□□ -1.68
CCDC90B-219ENST00000534753 J3KT08 172 aa4.57□□□□□ -1.68
CCDC90B-219ENST00000534753 NDUFB1O75438 58 aa4.57□□□□□ -1.68
CCDC90B-219ENST00000534753 LOC110117498A0A087WWA1 95 aa4.56□□□□□ -1.68
CCDC90B-219ENST00000534753 PDE6GP18545 87 aa4.55□□□□□ -1.68
CCDC90B-219ENST00000534753 A0A1W2PPM0 123 aa4.54□□□□□ -1.68
CCDC90B-219ENST00000534753 TAX1BP3O14907 124 aa4.54□□□□□ -1.68
CCDC90B-219ENST00000534753 NREPQ16612 68 aa4.54□□□□□ -1.68
CCDC90B-219ENST00000534753 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
CCDC90B-219ENST00000534753 A8MWP4 228 aa4.52□□□□□ -1.69
CCDC90B-219ENST00000534753 OCR1Q9BZK8 76 aa4.52□□□□□ -1.69
CCDC90B-219ENST00000534753 C8orf17Q9NRJ1 99 aa4.52□□□□□ -1.69
CCDC90B-219ENST00000534753 RBM12B-AS1Q9P1G2 102 aa4.52□□□□□ -1.69
CCDC90B-219ENST00000534753 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
CCDC90B-219ENST00000534753 IGKV3D-7A0A0C4DH55 119 aa4.51□□□□□ -1.69
CCDC90B-219ENST00000534753 ZCCHC13Q8WW36 166 aaKnown RBP4.51□□□□□ -1.69
CCDC90B-219ENST00000534753 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
CCDC90B-219ENST00000534753 A0A1B0GW54 56 aa4.5□□□□□ -1.69
CCDC90B-219ENST00000534753 H3BT86 120 aa4.5□□□□□ -1.69
CCDC90B-219ENST00000534753 HRES1P13985 223 aa4.49□□□□□ -1.69
CCDC90B-219ENST00000534753 SPCS1Q9Y6A9 102 aa4.49□□□□□ -1.69
CCDC90B-219ENST00000534753 NDUFS5O43920 106 aa4.48□□□□□ -1.69
CCDC90B-219ENST00000534753 SPINK7P58062 85 aa4.48□□□□□ -1.69
CCDC90B-219ENST00000534753 PRR15Q8IV56 129 aa4.48□□□□□ -1.69
CCDC90B-219ENST00000534753 CRCT1Q9UGL9 99 aa4.48□□□□□ -1.69
CCDC90B-219ENST00000534753 MT3P25713 68 aa4.47□□□□□ -1.69
CCDC90B-219ENST00000534753 K7EQZ3 153 aa4.46□□□□□ -1.7
CCDC90B-219ENST00000534753 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
CCDC90B-219ENST00000534753 BPY2O14599 106 aa4.45□□□□□ -1.7
CCDC90B-219ENST00000534753 COL5A1-AS1Q5SY13 56 aa4.45□□□□□ -1.7
CCDC90B-219ENST00000534753 MMP24-AS1A0A0U1RRL7 71 aa4.44□□□□□ -1.7
CCDC90B-219ENST00000534753 MRPL34Q9BQ48 92 aaKnown RBP4.44□□□□□ -1.7
CCDC90B-219ENST00000534753 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
CCDC90B-219ENST00000534753 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
CCDC90B-219ENST00000534753 PCP4L1A6NKN8 68 aa4.43□□□□□ -1.7
CCDC90B-219ENST00000534753 WFDC13Q8IUB5 93 aa4.43□□□□□ -1.7
CCDC90B-219ENST00000534753 Q8N9L7 120 aa4.43□□□□□ -1.7
CCDC90B-219ENST00000534753 TMEM254Q8TBM7 123 aa4.43□□□□□ -1.7
CCDC90B-219ENST00000534753 K7EP34 96 aa4.4□□□□□ -1.71
CCDC90B-219ENST00000534753 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
CCDC90B-219ENST00000534753 CASC2Q6XLA1 102 aa4.39□□□□□ -1.71
CCDC90B-219ENST00000534753 UBL5Q9BZL1 73 aa4.38□□□□□ -1.71
CCDC90B-219ENST00000534753 HCG22E2RYF7 251 aa4.37□□□□□ -1.71
CCDC90B-219ENST00000534753 MT2AP02795 61 aa4.37□□□□□ -1.71
CCDC90B-219ENST00000534753 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
CCDC90B-219ENST00000534753 LINC00846Q9NV44 126 aa4.37□□□□□ -1.71
CCDC90B-219ENST00000534753 PRO0461Q9UI25 63 aa4.37□□□□□ -1.71
CCDC90B-219ENST00000534753 GTF2H5Q6ZYL4 71 aa4.36□□□□□ -1.71
CCDC90B-219ENST00000534753 Q5W150 140 aa4.35□□□□□ -1.71
CCDC90B-219ENST00000534753 MT1FP04733 61 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms