RNA–Protein interactions for RNA: ENST00000534060.5

ARHGAP42-208, Transcript of Rho GTPase activating protein 42, humanhuman

TSL 3

Gene ARHGAP42, Length 501 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP42-208ENST00000534060 CSMD3Q7Z407 3707 aa0.59□□□□□ -2.32
ARHGAP42-208ENST00000534060 SRRM2Q9UQ35 2752 aaKnown RBP0.59□□□□□ -2.32
ARHGAP42-208ENST00000534060 PRKDCP78527 4128 aaKnown RBP0.58□□□□□ -2.32
ARHGAP42-208ENST00000534060 AKAP13Q12802 2813 aa0.58□□□□□ -2.32
ARHGAP42-208ENST00000534060 MGAQ8IWI9 3026 aa0.58□□□□□ -2.32
ARHGAP42-208ENST00000534060 NBASA2RRP1 2371 aa0.58□□□□□ -2.32
ARHGAP42-208ENST00000534060 CEP250Q9BV73 2442 aa0.58□□□□□ -2.32
ARHGAP42-208ENST00000534060 COL6A5A8TX70 2615 aa0.58□□□□□ -2.32
ARHGAP42-208ENST00000534060 DNAH11Q96DT5 4516 aa0.58□□□□□ -2.32
ARHGAP42-208ENST00000534060 CHD9Q3L8U1 2897 aa0.58□□□□□ -2.32
ARHGAP42-208ENST00000534060 SPART-AS1P0CW21 52 aa0.57□□□□□ -2.32
ARHGAP42-208ENST00000534060 HTN1P15515 57 aa0.57□□□□□ -2.32
ARHGAP42-208ENST00000534060 KRTAP8-1Q8IUC2 63 aa0.57□□□□□ -2.32
ARHGAP42-208ENST00000534060 Q9Y3F1 56 aa0.57□□□□□ -2.32
ARHGAP42-208ENST00000534060 SPTBN4Q9H254 2564 aa0.57□□□□□ -2.32
ARHGAP42-208ENST00000534060 ATRQ13535 2644 aa0.56□□□□□ -2.32
ARHGAP42-208ENST00000534060 MYCBP2O75592 4640 aa0.56□□□□□ -2.32
ARHGAP42-208ENST00000534060 EPG5Q9HCE0 2579 aa0.55□□□□□ -2.32
ARHGAP42-208ENST00000534060 CHD8Q9HCK8 2581 aa0.55□□□□□ -2.32
ARHGAP42-208ENST00000534060 TNRC18O15417 2968 aaPredicted RBP0.55□□□□□ -2.32
ARHGAP42-208ENST00000534060 H3BNG1 76 aa0.55□□□□□ -2.32
ARHGAP42-208ENST00000534060 SPINK6Q6UWN8 80 aa0.55□□□□□ -2.32
ARHGAP42-208ENST00000534060 TNXBP22105 4242 aa0.55□□□□□ -2.32
ARHGAP42-208ENST00000534060 SACSQ9NZJ4 4579 aa0.55□□□□□ -2.32
ARHGAP42-208ENST00000534060 FAM186AA6NE01 2351 aa0.55□□□□□ -2.32
ARHGAP42-208ENST00000534060 ANK2Q01484 3957 aa0.54□□□□□ -2.32
ARHGAP42-208ENST00000534060 RPS29P62273 56 aaKnown RBP0.54□□□□□ -2.32
ARHGAP42-208ENST00000534060 DEFB136Q30KP8 78 aa0.54□□□□□ -2.32
ARHGAP42-208ENST00000534060 CRYBG3Q68DQ2 2970 aa0.54□□□□□ -2.32
ARHGAP42-208ENST00000534060 DEFB108BQ8NET1 73 aa0.54□□□□□ -2.32
ARHGAP42-208ENST00000534060 DYNC2H1Q8NCM8 4307 aaKnown RBP0.54□□□□□ -2.32
ARHGAP42-208ENST00000534060 CHD6Q8TD26 2715 aa0.54□□□□□ -2.32
ARHGAP42-208ENST00000534060 NBPF19A0A087WUL8 3843 aa0.54□□□□□ -2.32
ARHGAP42-208ENST00000534060 ANK3Q12955 4377 aaKnown RBP0.54□□□□□ -2.32
ARHGAP42-208ENST00000534060 BSNQ9UPA5 3926 aa0.54□□□□□ -2.32
ARHGAP42-208ENST00000534060 BDP1A6H8Y1 2624 aa0.53□□□□□ -2.32
ARHGAP42-208ENST00000534060 DNAH2Q9P225 4427 aa0.53□□□□□ -2.32
ARHGAP42-208ENST00000534060 KMT2AQ03164 3969 aa0.53□□□□□ -2.32
ARHGAP42-208ENST00000534060 MAP1BP46821 2468 aaKnown RBP0.53□□□□□ -2.32
ARHGAP42-208ENST00000534060 CCDC168Q8NDH2 2452 aa0.53□□□□□ -2.32
ARHGAP42-208ENST00000534060 A0A096LNI7 61 aa0.53□□□□□ -2.32
ARHGAP42-208ENST00000534060 LINC01556Q5JQF7 62 aa0.53□□□□□ -2.32
ARHGAP42-208ENST00000534060 DNAH8Q96JB1 4490 aa0.53□□□□□ -2.33
ARHGAP42-208ENST00000534060 RIF1Q5UIP0 2472 aaKnown RBP0.53□□□□□ -2.33
ARHGAP42-208ENST00000534060 PIEZO1Q92508 2521 aa0.52□□□□□ -2.33
ARHGAP42-208ENST00000534060 U3KQA8 63 aa0.52□□□□□ -2.33
ARHGAP42-208ENST00000534060 APCP25054 2843 aa0.52□□□□□ -2.33
ARHGAP42-208ENST00000534060 FAT2Q9NYQ8 4349 aa0.52□□□□□ -2.33
ARHGAP42-208ENST00000534060 USP24Q9UPU5 2620 aa0.51□□□□□ -2.33
ARHGAP42-208ENST00000534060 FLNCQ14315 2725 aa0.51□□□□□ -2.33
ARHGAP42-208ENST00000534060 PKD1P98161 4303 aa0.51□□□□□ -2.33
ARHGAP42-208ENST00000534060 PRM1P04553 51 aa0.51□□□□□ -2.33
ARHGAP42-208ENST00000534060 FBN2P35556 2912 aa0.51□□□□□ -2.33
ARHGAP42-208ENST00000534060 DEFB110Q30KQ9 67 aa0.51□□□□□ -2.33
ARHGAP42-208ENST00000534060 FRYQ5TBA9 3013 aa0.51□□□□□ -2.33
ARHGAP42-208ENST00000534060 DNAH3Q8TD57 4116 aa0.51□□□□□ -2.33
ARHGAP42-208ENST00000534060 DCHS2Q6V1P9 2916 aa0.51□□□□□ -2.33
ARHGAP42-208ENST00000534060 NSD1Q96L73 2696 aaPredicted RBP0.51□□□□□ -2.33
ARHGAP42-208ENST00000534060 STAB1Q9NY15 2570 aa0.51□□□□□ -2.33
ARHGAP42-208ENST00000534060 HIVEP3Q5T1R4 2406 aa0.5□□□□□ -2.33
ARHGAP42-208ENST00000534060 VPS13BQ7Z7G8 4022 aa0.5□□□□□ -2.33
ARHGAP42-208ENST00000534060 COL12A1Q99715 3063 aa0.5□□□□□ -2.33
ARHGAP42-208ENST00000534060 A0A096LPF7 62 aa0.5□□□□□ -2.33
ARHGAP42-208ENST00000534060 LRRK2Q5S007 2527 aa0.5□□□□□ -2.33
ARHGAP42-208ENST00000534060 PTPN13Q12923 2485 aa0.5□□□□□ -2.33
ARHGAP42-208ENST00000534060 AKAP9Q99996 3911 aa0.5□□□□□ -2.33
ARHGAP42-208ENST00000534060 NOTCH1P46531 2555 aa0.5□□□□□ -2.33
ARHGAP42-208ENST00000534060 FRAS1Q86XX4 4008 aa0.49□□□□□ -2.33
ARHGAP42-208ENST00000534060 ZNF469Q96JG9 3925 aaPredicted RBP0.49□□□□□ -2.33
ARHGAP42-208ENST00000534060 LYSTQ99698 3801 aa0.49□□□□□ -2.33
ARHGAP42-208ENST00000534060 HSPG2P98160 4391 aa0.49□□□□□ -2.33
ARHGAP42-208ENST00000534060 PKHD1L1Q86WI1 4243 aa0.49□□□□□ -2.33
ARHGAP42-208ENST00000534060 MT1AP04731 61 aa0.49□□□□□ -2.33
ARHGAP42-208ENST00000534060 KRTAP19-3Q7Z4W3 81 aa0.49□□□□□ -2.33
ARHGAP42-208ENST00000534060 FRYLO94915 3013 aa0.49□□□□□ -2.33
ARHGAP42-208ENST00000534060 DNAH7Q8WXX0 4024 aa0.49□□□□□ -2.33
ARHGAP42-208ENST00000534060 NF1P21359 2839 aa0.49□□□□□ -2.33
ARHGAP42-208ENST00000534060 USP9YO00507 2555 aaPredicted RBP0.49□□□□□ -2.33
ARHGAP42-208ENST00000534060 MTORP42345 2549 aa0.48□□□□□ -2.33
ARHGAP42-208ENST00000534060 NCOR2Q9Y618 2525 aa0.48□□□□□ -2.33
ARHGAP42-208ENST00000534060 PDZD2O15018 2839 aa0.48□□□□□ -2.33
ARHGAP42-208ENST00000534060 CFAP54Q96N23 3096 aa0.48□□□□□ -2.33
ARHGAP42-208ENST00000534060 HUWE1Q7Z6Z7 4374 aaKnown RBP0.48□□□□□ -2.33
ARHGAP42-208ENST00000534060 SMR3BP02814 79 aaPredicted RBP0.48□□□□□ -2.33
ARHGAP42-208ENST00000534060 DNAH10Q8IVF4 4471 aa0.48□□□□□ -2.33
ARHGAP42-208ENST00000534060 COL6A3P12111 3177 aa0.48□□□□□ -2.33
ARHGAP42-208ENST00000534060 ACANP16112 2415 aa0.47□□□□□ -2.33
ARHGAP42-208ENST00000534060 ATMQ13315 3056 aa0.47□□□□□ -2.33
ARHGAP42-208ENST00000534060 ITPR3Q14573 2671 aa0.47□□□□□ -2.33
ARHGAP42-208ENST00000534060 DEFB133Q30KQ1 61 aa0.47□□□□□ -2.33
ARHGAP42-208ENST00000534060 KRTAP19-5Q3LI72 72 aa0.47□□□□□ -2.33
ARHGAP42-208ENST00000534060 DNAH1Q9P2D7 4330 aa0.47□□□□□ -2.33
ARHGAP42-208ENST00000534060 TACC2O95359 2948 aa0.47□□□□□ -2.33
ARHGAP42-208ENST00000534060 CACNA1AO00555 2505 aa0.46□□□□□ -2.34
ARHGAP42-208ENST00000534060 FAT3Q8TDW7 4589 aa0.46□□□□□ -2.34
ARHGAP42-208ENST00000534060 RANBP2P49792 3224 aaKnown RBP0.46□□□□□ -2.34
ARHGAP42-208ENST00000534060 COL7A1Q02388 2944 aa0.46□□□□□ -2.34
ARHGAP42-208ENST00000534060 TRIOO75962 3097 aa0.46□□□□□ -2.34
ARHGAP42-208ENST00000534060 SPRR2BP35325 72 aa0.46□□□□□ -2.34
ARHGAP42-208ENST00000534060 UTP20O75691 2785 aaKnown RBP0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms