RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 AKAP9Q99996 3911 aa3.68□□□□□ -1.82
UBQLN1-206ENST00000533705 H1FX-AS1Q4G0G2 97 aa3.68□□□□□ -1.82
UBQLN1-206ENST00000533705 Q5VV11 94 aa3.68□□□□□ -1.82
UBQLN1-206ENST00000533705 RPS29P62273 56 aaKnown RBP3.68□□□□□ -1.82
UBQLN1-206ENST00000533705 LOC400499M0QZD8 3231 aa3.67□□□□□ -1.82
UBQLN1-206ENST00000533705 KRTAP29-1A8MX34 341 aaPredicted RBP3.66□□□□□ -1.82
UBQLN1-206ENST00000533705 KRTAP11-1Q8IUC1 163 aa3.66□□□□□ -1.82
UBQLN1-206ENST00000533705 FLNCQ14315 2725 aa3.66□□□□□ -1.82
UBQLN1-206ENST00000533705 ASB16-AS1Q495Z4 193 aa3.66□□□□□ -1.82
UBQLN1-206ENST00000533705 PRAC1Q96KF2 57 aa3.66□□□□□ -1.82
UBQLN1-206ENST00000533705 ROMO1P60602 79 aa3.65□□□□□ -1.83
UBQLN1-206ENST00000533705 HIVEP1P15822 2718 aa3.65□□□□□ -1.83
UBQLN1-206ENST00000533705 NOTCH2NLQ7Z3S9 236 aa3.65□□□□□ -1.83
UBQLN1-206ENST00000533705 ATMQ13315 3056 aa3.64□□□□□ -1.83
UBQLN1-206ENST00000533705 Q5XG85 94 aa3.64□□□□□ -1.83
UBQLN1-206ENST00000533705 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
UBQLN1-206ENST00000533705 CRYBG3Q68DQ2 2970 aa3.63□□□□□ -1.83
UBQLN1-206ENST00000533705 KRTAP13-2Q52LG2 175 aa3.62□□□□□ -1.83
UBQLN1-206ENST00000533705 KRTAP7-1Q8IUC3 87 aa3.62□□□□□ -1.83
UBQLN1-206ENST00000533705 UTP20O75691 2785 aaKnown RBP3.61□□□□□ -1.83
UBQLN1-206ENST00000533705 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
UBQLN1-206ENST00000533705 FREM2Q5SZK8 3169 aa3.61□□□□□ -1.83
UBQLN1-206ENST00000533705 COL12A1Q99715 3063 aa3.6□□□□□ -1.83
UBQLN1-206ENST00000533705 KRTAP13-1Q8IUC0 172 aa3.59□□□□□ -1.83
UBQLN1-206ENST00000533705 A8MUU9 505 aa3.59□□□□□ -1.83
UBQLN1-206ENST00000533705 A0A0A0MQY5 61 aa3.59□□□□□ -1.84
UBQLN1-206ENST00000533705 NBPF19A0A087WUL8 3843 aa3.59□□□□□ -1.84
UBQLN1-206ENST00000533705 RELNP78509 3460 aa3.58□□□□□ -1.84
UBQLN1-206ENST00000533705 NIPBLQ6KC79 2804 aaeCLIP3.56□□□□□ -1.84
UBQLN1-206ENST00000533705 KALRNO60229 2985 aa3.56□□□□□ -1.84
UBQLN1-206ENST00000533705 ASH1LQ9NR48 2969 aaKnown RBP3.54□□□□□ -1.84
UBQLN1-206ENST00000533705 APCP25054 2843 aa3.54□□□□□ -1.84
UBQLN1-206ENST00000533705 CELSR3Q9NYQ7 3312 aa3.54□□□□□ -1.84
UBQLN1-206ENST00000533705 ANK2Q01484 3957 aa3.54□□□□□ -1.84
UBQLN1-206ENST00000533705 LRBAP50851 2863 aa3.53□□□□□ -1.84
UBQLN1-206ENST00000533705 ZNF469Q96JG9 3925 aaPredicted RBP3.53□□□□□ -1.84
UBQLN1-206ENST00000533705 CELSR2Q9HCU4 2923 aa3.52□□□□□ -1.85
UBQLN1-206ENST00000533705 BOD1L1Q8NFC6 3051 aa3.52□□□□□ -1.85
UBQLN1-206ENST00000533705 A8MU10 97 aa3.51□□□□□ -1.85
UBQLN1-206ENST00000533705 DNHD1Q96M86 4753 aa3.49□□□□□ -1.85
UBQLN1-206ENST00000533705 TENM3Q9P273 2699 aa3.48□□□□□ -1.85
UBQLN1-206ENST00000533705 VPS13CQ709C8 3753 aa3.48□□□□□ -1.85
UBQLN1-206ENST00000533705 DCHS2Q6V1P9 2916 aa3.48□□□□□ -1.85
UBQLN1-206ENST00000533705 PDZD2O15018 2839 aa3.48□□□□□ -1.85
UBQLN1-206ENST00000533705 ADGRG4Q8IZF6 3080 aa3.47□□□□□ -1.85
UBQLN1-206ENST00000533705 A0A1B0GVY2 172 aa3.47□□□□□ -1.85
UBQLN1-206ENST00000533705 DNAH3Q8TD57 4116 aa3.47□□□□□ -1.85
UBQLN1-206ENST00000533705 TNP1P09430 55 aa3.46□□□□□ -1.86
UBQLN1-206ENST00000533705 KRTAP1-4P0C5Y4 121 aa3.45□□□□□ -1.86
UBQLN1-206ENST00000533705 XP32Q5T750 250 aa3.45□□□□□ -1.86
UBQLN1-206ENST00000533705 TENM1Q9UKZ4 2725 aa3.45□□□□□ -1.86
UBQLN1-206ENST00000533705 CMYA5Q8N3K9 4069 aa3.44□□□□□ -1.86
UBQLN1-206ENST00000533705 CSMD1Q96PZ7 3565 aa3.43□□□□□ -1.86
UBQLN1-206ENST00000533705 H3BS24 57 aa3.43□□□□□ -1.86
UBQLN1-206ENST00000533705 KRTAP10-8P60410 259 aa3.43□□□□□ -1.86
UBQLN1-206ENST00000533705 FBN2P35556 2912 aa3.42□□□□□ -1.86
UBQLN1-206ENST00000533705 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
UBQLN1-206ENST00000533705 TENM2Q9NT68 2774 aa3.42□□□□□ -1.86
UBQLN1-206ENST00000533705 TPRXLQ17RH7 258 aa3.41□□□□□ -1.86
UBQLN1-206ENST00000533705 ZANQ9Y493 2812 aa3.41□□□□□ -1.86
UBQLN1-206ENST00000533705 NF1P21359 2839 aa3.4□□□□□ -1.86
UBQLN1-206ENST00000533705 OTOGQ6ZRI0 2925 aa3.4□□□□□ -1.87
UBQLN1-206ENST00000533705 KRTAP10-10P60014 251 aa3.4□□□□□ -1.87
UBQLN1-206ENST00000533705 CSMD2Q7Z408 3487 aa3.39□□□□□ -1.87
UBQLN1-206ENST00000533705 A6NN06 94 aa3.38□□□□□ -1.87
UBQLN1-206ENST00000533705 CUBNO60494 3623 aa3.37□□□□□ -1.87
UBQLN1-206ENST00000533705 PKD1L1Q8TDX9 2849 aa3.36□□□□□ -1.87
UBQLN1-206ENST00000533705 HRNRQ86YZ3 2850 aaPredicted RBP3.35□□□□□ -1.87
UBQLN1-206ENST00000533705 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.87
UBQLN1-206ENST00000533705 KRTAP13-3Q3SY46 172 aa3.33□□□□□ -1.88
UBQLN1-206ENST00000533705 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
UBQLN1-206ENST00000533705 PRO2289Q9P1D8 64 aa3.31□□□□□ -1.88
UBQLN1-206ENST00000533705 KRTAP16-1A8MUX0 517 aa3.31□□□□□ -1.88
UBQLN1-206ENST00000533705 ANK3Q12955 4377 aaKnown RBP3.3□□□□□ -1.88
UBQLN1-206ENST00000533705 CELSR1Q9NYQ6 3014 aa3.3□□□□□ -1.88
UBQLN1-206ENST00000533705 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
UBQLN1-206ENST00000533705 MXRA5Q9NR99 2828 aa3.29□□□□□ -1.88
UBQLN1-206ENST00000533705 VWFP04275 2813 aa3.28□□□□□ -1.88
UBQLN1-206ENST00000533705 LYSTQ99698 3801 aa3.28□□□□□ -1.88
UBQLN1-206ENST00000533705 H0YAA0 97 aa3.24□□□□□ -1.89
UBQLN1-206ENST00000533705 SVEP1Q4LDE5 3571 aa3.24□□□□□ -1.89
UBQLN1-206ENST00000533705 P0C880 135 aa3.24□□□□□ -1.89
UBQLN1-206ENST00000533705 DNAH7Q8WXX0 4024 aa3.23□□□□□ -1.89
UBQLN1-206ENST00000533705 TGP01266 2768 aa3.22□□□□□ -1.89
UBQLN1-206ENST00000533705 SRRM2Q9UQ35 2752 aaKnown RBP3.2□□□□□ -1.9
UBQLN1-206ENST00000533705 DYNC2H1Q8NCM8 4307 aaKnown RBP3.19□□□□□ -1.9
UBQLN1-206ENST00000533705 RYR3Q15413 4870 aa3.19□□□□□ -1.9
UBQLN1-206ENST00000533705 PRKDCP78527 4128 aaKnown RBP3.16□□□□□ -1.9
UBQLN1-206ENST00000533705 KMT2CQ8NEZ4 4911 aaKnown RBP3.14□□□□□ -1.91
UBQLN1-206ENST00000533705 CSMD3Q7Z407 3707 aa3.13□□□□□ -1.91
UBQLN1-206ENST00000533705 TRRAPQ9Y4A5 3859 aa3.12□□□□□ -1.91
UBQLN1-206ENST00000533705 FBN1P35555 2871 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-206ENST00000533705 DNAH1Q9P2D7 4330 aa3.11□□□□□ -1.91
UBQLN1-206ENST00000533705 MEGF8Q7Z7M0 2845 aa3.1□□□□□ -1.91
UBQLN1-206ENST00000533705 COL7A1Q02388 2944 aa3.09□□□□□ -1.92
UBQLN1-206ENST00000533705 RYR2Q92736 4967 aa3.08□□□□□ -1.92
UBQLN1-206ENST00000533705 FBN3Q75N90 2809 aa3.08□□□□□ -1.92
UBQLN1-206ENST00000533705 KRTAP12-2P59991 146 aa3.08□□□□□ -1.92
UBQLN1-206ENST00000533705 KRTAP13-4Q3LI77 160 aa3.06□□□□□ -1.92
UBQLN1-206ENST00000533705 FRAS1Q86XX4 4008 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms