RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 GCN1Q92616 2671 aaKnown RBP3.99□□□□□ -1.77
CTNND1-236ENST00000533667 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
CTNND1-236ENST00000533667 TEX15Q9BXT5 2789 aa3.99□□□□□ -1.77
CTNND1-236ENST00000533667 RELNP78509 3460 aa3.99□□□□□ -1.77
CTNND1-236ENST00000533667 KRTAP11-1Q8IUC1 163 aa3.99□□□□□ -1.77
CTNND1-236ENST00000533667 KRTAP7-1Q8IUC3 87 aa3.99□□□□□ -1.77
CTNND1-236ENST00000533667 VPS13CQ709C8 3753 aa3.98□□□□□ -1.77
CTNND1-236ENST00000533667 DMBT1Q9UGM3 2413 aaPredicted RBP3.98□□□□□ -1.77
CTNND1-236ENST00000533667 TEP1Q99973 2627 aaKnown RBP3.97□□□□□ -1.77
CTNND1-236ENST00000533667 COL6A5A8TX70 2615 aa3.95□□□□□ -1.78
CTNND1-236ENST00000533667 KALRNO60229 2985 aa3.95□□□□□ -1.78
CTNND1-236ENST00000533667 DMXL2Q8TDJ6 3036 aa3.95□□□□□ -1.78
CTNND1-236ENST00000533667 KRTAP13-2Q52LG2 175 aa3.94□□□□□ -1.78
CTNND1-236ENST00000533667 NOTCH1P46531 2555 aa3.94□□□□□ -1.78
CTNND1-236ENST00000533667 BOD1L1Q8NFC6 3051 aa3.93□□□□□ -1.78
CTNND1-236ENST00000533667 ITPR1Q14643 2758 aa3.92□□□□□ -1.78
CTNND1-236ENST00000533667 MGAQ8IWI9 3026 aa3.92□□□□□ -1.78
CTNND1-236ENST00000533667 SETXQ7Z333 2677 aaKnown RBP3.91□□□□□ -1.78
CTNND1-236ENST00000533667 CSMD1Q96PZ7 3565 aa3.9□□□□□ -1.78
CTNND1-236ENST00000533667 NBPF19A0A087WUL8 3843 aa3.89□□□□□ -1.79
CTNND1-236ENST00000533667 NSD1Q96L73 2696 aaPredicted RBP3.89□□□□□ -1.79
CTNND1-236ENST00000533667 NBEAL2Q6ZNJ1 2754 aa3.88□□□□□ -1.79
CTNND1-236ENST00000533667 IGSF10Q6WRI0 2623 aa3.87□□□□□ -1.79
CTNND1-236ENST00000533667 KMT2BQ9UMN6 2715 aaPredicted RBP3.86□□□□□ -1.79
CTNND1-236ENST00000533667 STAB2Q8WWQ8 2551 aa3.86□□□□□ -1.79
CTNND1-236ENST00000533667 CSMD2Q7Z408 3487 aa3.86□□□□□ -1.79
CTNND1-236ENST00000533667 UBR5O95071 2799 aaPredicted RBP3.84□□□□□ -1.79
CTNND1-236ENST00000533667 MAP1AP78559 2803 aaPredicted RBP3.84□□□□□ -1.79
CTNND1-236ENST00000533667 AKAP9Q99996 3911 aa3.84□□□□□ -1.8
CTNND1-236ENST00000533667 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
CTNND1-236ENST00000533667 ZNF469Q96JG9 3925 aaPredicted RBP3.83□□□□□ -1.8
CTNND1-236ENST00000533667 DCHS2Q6V1P9 2916 aa3.83□□□□□ -1.8
CTNND1-236ENST00000533667 P0C880 135 aa3.82□□□□□ -1.8
CTNND1-236ENST00000533667 ITPR2Q14571 2701 aa3.82□□□□□ -1.8
CTNND1-236ENST00000533667 TNP1P09430 55 aa3.82□□□□□ -1.8
CTNND1-236ENST00000533667 CRYBG3Q68DQ2 2970 aa3.8□□□□□ -1.8
CTNND1-236ENST00000533667 CUBNO60494 3623 aa3.79□□□□□ -1.8
CTNND1-236ENST00000533667 DSPP15924 2871 aaKnown RBP3.79□□□□□ -1.8
CTNND1-236ENST00000533667 BAHCC1Q9P281 2608 aa3.77□□□□□ -1.81
CTNND1-236ENST00000533667 KRTAP1-4P0C5Y4 121 aa3.76□□□□□ -1.81
CTNND1-236ENST00000533667 SVEP1Q4LDE5 3571 aa3.75□□□□□ -1.81
CTNND1-236ENST00000533667 CELSR2Q9HCU4 2923 aa3.74□□□□□ -1.81
CTNND1-236ENST00000533667 ASH1LQ9NR48 2969 aaKnown RBP3.74□□□□□ -1.81
CTNND1-236ENST00000533667 COL12A1Q99715 3063 aa3.72□□□□□ -1.81
CTNND1-236ENST00000533667 XP32Q5T750 250 aa3.72□□□□□ -1.81
CTNND1-236ENST00000533667 LCE2DQ5TA82 110 aaPredicted RBP3.72□□□□□ -1.81
CTNND1-236ENST00000533667 C10orf95Q9H7T3 257 aa3.72□□□□□ -1.81
CTNND1-236ENST00000533667 TENM4Q6N022 2769 aa3.71□□□□□ -1.82
CTNND1-236ENST00000533667 APCP25054 2843 aa3.7□□□□□ -1.82
CTNND1-236ENST00000533667 H0YAA0 97 aa3.7□□□□□ -1.82
CTNND1-236ENST00000533667 HRNRQ86YZ3 2850 aaPredicted RBP3.7□□□□□ -1.82
CTNND1-236ENST00000533667 ADGRG4Q8IZF6 3080 aa3.7□□□□□ -1.82
CTNND1-236ENST00000533667 TPRXLQ17RH7 258 aa3.69□□□□□ -1.82
CTNND1-236ENST00000533667 CELSR1Q9NYQ6 3014 aa3.68□□□□□ -1.82
CTNND1-236ENST00000533667 NIPBLQ6KC79 2804 aaeCLIP3.68□□□□□ -1.821e-6■□□□□ 9
CTNND1-236ENST00000533667 UTP20O75691 2785 aaKnown RBP3.68□□□□□ -1.82
CTNND1-236ENST00000533667 FLNCQ14315 2725 aa3.68□□□□□ -1.82
CTNND1-236ENST00000533667 FBN2P35556 2912 aa3.66□□□□□ -1.82
CTNND1-236ENST00000533667 HIVEP1P15822 2718 aa3.66□□□□□ -1.82
CTNND1-236ENST00000533667 LRBAP50851 2863 aa3.62□□□□□ -1.83
CTNND1-236ENST00000533667 INE1O15225 51 aa3.62□□□□□ -1.83
CTNND1-236ENST00000533667 KRTAP10-8P60410 259 aa3.62□□□□□ -1.83
CTNND1-236ENST00000533667 KRTAP13-3Q3SY46 172 aa3.61□□□□□ -1.83
CTNND1-236ENST00000533667 CMYA5Q8N3K9 4069 aa3.6□□□□□ -1.83
CTNND1-236ENST00000533667 TACC2O95359 2948 aa3.6□□□□□ -1.83
CTNND1-236ENST00000533667 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
CTNND1-236ENST00000533667 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
CTNND1-236ENST00000533667 PDZD2O15018 2839 aa3.56□□□□□ -1.84
CTNND1-236ENST00000533667 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
CTNND1-236ENST00000533667 ANK3Q12955 4377 aaKnown RBP3.55□□□□□ -1.84
CTNND1-236ENST00000533667 A0A1B0GVY2 172 aa3.54□□□□□ -1.84
CTNND1-236ENST00000533667 ANK2Q01484 3957 aa3.52□□□□□ -1.85
CTNND1-236ENST00000533667 KRTAP10-10P60014 251 aa3.52□□□□□ -1.85
CTNND1-236ENST00000533667 KRTAP17-1Q9BYP8 105 aa3.52□□□□□ -1.85
CTNND1-236ENST00000533667 DNAH3Q8TD57 4116 aa3.49□□□□□ -1.85
CTNND1-236ENST00000533667 OTOGQ6ZRI0 2925 aa3.49□□□□□ -1.85
CTNND1-236ENST00000533667 ZANQ9Y493 2812 aa3.47□□□□□ -1.85
CTNND1-236ENST00000533667 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
CTNND1-236ENST00000533667 TENM3Q9P273 2699 aa3.44□□□□□ -1.86
CTNND1-236ENST00000533667 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
CTNND1-236ENST00000533667 TGP01266 2768 aa3.44□□□□□ -1.86
CTNND1-236ENST00000533667 TENM1Q9UKZ4 2725 aa3.43□□□□□ -1.86
CTNND1-236ENST00000533667 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
CTNND1-236ENST00000533667 MXRA5Q9NR99 2828 aa3.41□□□□□ -1.86
CTNND1-236ENST00000533667 NF1P21359 2839 aa3.4□□□□□ -1.86
CTNND1-236ENST00000533667 TRRAPQ9Y4A5 3859 aa3.39□□□□□ -1.87
CTNND1-236ENST00000533667 KRTAP3-1Q9BYR8 98 aa3.38□□□□□ -1.87
CTNND1-236ENST00000533667 TENM2Q9NT68 2774 aa3.37□□□□□ -1.87
CTNND1-236ENST00000533667 CSMD3Q7Z407 3707 aa3.36□□□□□ -1.87
CTNND1-236ENST00000533667 DNHD1Q96M86 4753 aa3.36□□□□□ -1.87
CTNND1-236ENST00000533667 KRTAP10-6P60371 365 aaPredicted RBP3.31□□□□□ -1.88
CTNND1-236ENST00000533667 LYSTQ99698 3801 aa3.3□□□□□ -1.88
CTNND1-236ENST00000533667 DNAH7Q8WXX0 4024 aa3.29□□□□□ -1.88
CTNND1-236ENST00000533667 FBN1P35555 2871 aaKnown RBP3.28□□□□□ -1.88
CTNND1-236ENST00000533667 PRKDCP78527 4128 aaKnown RBP3.26□□□□□ -1.89
CTNND1-236ENST00000533667 DYNC2H1Q8NCM8 4307 aaKnown RBP3.25□□□□□ -1.89
CTNND1-236ENST00000533667 COL7A1Q02388 2944 aa3.24□□□□□ -1.89
CTNND1-236ENST00000533667 DNAH1Q9P2D7 4330 aa3.24□□□□□ -1.89
CTNND1-236ENST00000533667 VWFP04275 2813 aa3.22□□□□□ -1.89
CTNND1-236ENST00000533667 PKD1L1Q8TDX9 2849 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms