RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 HRCT1Q6UXD1 115 aa6.41□□□□□ -1.38
TRAPPC4-213ENST00000533149 FAM240AA0A1B0GVK7 77 aa6.4□□□□□ -1.39
TRAPPC4-213ENST00000533149 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.39
TRAPPC4-213ENST00000533149 A0A1B0GW54 56 aa6.39□□□□□ -1.39
TRAPPC4-213ENST00000533149 LINC00846Q9NV44 126 aa6.39□□□□□ -1.39
TRAPPC4-213ENST00000533149 TRBV7-7A0A0K0K1E9 115 aa6.38□□□□□ -1.39
TRAPPC4-213ENST00000533149 CD164Q04900 197 aa6.38□□□□□ -1.39
TRAPPC4-213ENST00000533149 FP248Q71RG6 208 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC4-213ENST00000533149 A0A087WSZ3 146 aa6.37□□□□□ -1.39
TRAPPC4-213ENST00000533149 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
TRAPPC4-213ENST00000533149 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
TRAPPC4-213ENST00000533149 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
TRAPPC4-213ENST00000533149 NREPQ16612 68 aa6.35□□□□□ -1.39
TRAPPC4-213ENST00000533149 KRTAP13-3Q3SY46 172 aa6.34□□□□□ -1.39
TRAPPC4-213ENST00000533149 UBL5Q9BZL1 73 aa6.34□□□□□ -1.39
TRAPPC4-213ENST00000533149 MT1HP80294 61 aa6.33□□□□□ -1.4
TRAPPC4-213ENST00000533149 SPAG11AQ6PDA7 123 aa6.33□□□□□ -1.4
TRAPPC4-213ENST00000533149 Q6ZVQ6 151 aa6.33□□□□□ -1.4
TRAPPC4-213ENST00000533149 SPINK1P00995 79 aa6.31□□□□□ -1.4
TRAPPC4-213ENST00000533149 LINC00643Q86TS7 51 aa6.3□□□□□ -1.4
TRAPPC4-213ENST00000533149 SS18L2Q9UHA2 77 aa6.3□□□□□ -1.4
TRAPPC4-213ENST00000533149 KRTAP10-6P60371 365 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC4-213ENST00000533149 Q5XG85 94 aa6.29□□□□□ -1.4
TRAPPC4-213ENST00000533149 LIMD2Q9BT23 127 aa6.28□□□□□ -1.4
TRAPPC4-213ENST00000533149 LINC00472Q9H8W2 130 aa6.28□□□□□ -1.4
TRAPPC4-213ENST00000533149 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
TRAPPC4-213ENST00000533149 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
TRAPPC4-213ENST00000533149 IGKV3D-7A0A0C4DH55 119 aa6.26□□□□□ -1.41
TRAPPC4-213ENST00000533149 BPY2O14599 106 aa6.26□□□□□ -1.41
TRAPPC4-213ENST00000533149 RPS29P62273 56 aaKnown RBP6.26□□□□□ -1.41
TRAPPC4-213ENST00000533149 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
TRAPPC4-213ENST00000533149 Q96NJ1 140 aa6.25□□□□□ -1.41
TRAPPC4-213ENST00000533149 C1orf195Q5TG92 126 aa6.25□□□□□ -1.41
TRAPPC4-213ENST00000533149 SIGMAR1Q99720 223 aa6.25□□□□□ -1.41
TRAPPC4-213ENST00000533149 MT-ATP8P03928 68 aa6.24□□□□□ -1.41
TRAPPC4-213ENST00000533149 IGKV4-1P06312 121 aa6.24□□□□□ -1.41
TRAPPC4-213ENST00000533149 J3KT08 172 aa6.23□□□□□ -1.41
TRAPPC4-213ENST00000533149 CXCL6P80162 114 aa6.23□□□□□ -1.41
TRAPPC4-213ENST00000533149 ATP5EP2Q5VTU8 51 aa6.23□□□□□ -1.41
TRAPPC4-213ENST00000533149 M0R2T5 61 aa6.22□□□□□ -1.41
TRAPPC4-213ENST00000533149 DSCR10P59022 87 aa6.22□□□□□ -1.41
TRAPPC4-213ENST00000533149 A8MWP4 228 aa6.19□□□□□ -1.42
TRAPPC4-213ENST00000533149 Q8N9L7 120 aa6.19□□□□□ -1.42
TRAPPC4-213ENST00000533149 K7EQZ3 153 aa6.17□□□□□ -1.42
TRAPPC4-213ENST00000533149 NDUFB1O75438 58 aa6.17□□□□□ -1.42
TRAPPC4-213ENST00000533149 HIST1H4AP62805 103 aaKnown RBP6.17□□□□□ -1.42
TRAPPC4-213ENST00000533149 PRR15Q8IV56 129 aa6.17□□□□□ -1.42
TRAPPC4-213ENST00000533149 IMUPQ9GZP8 106 aa6.16□□□□□ -1.42
TRAPPC4-213ENST00000533149 IGHV6-1A0A0B4J1U7 121 aa6.14□□□□□ -1.43
TRAPPC4-213ENST00000533149 A0A1B0GVX0 72 aa6.14□□□□□ -1.43
TRAPPC4-213ENST00000533149 A0A087WVE0 104 aa6.13□□□□□ -1.43
TRAPPC4-213ENST00000533149 PCOTHQ58A44 107 aa6.11□□□□□ -1.43
TRAPPC4-213ENST00000533149 NOTCH2NLQ7Z3S9 236 aa6.11□□□□□ -1.43
TRAPPC4-213ENST00000533149 C8orf17Q9NRJ1 99 aa6.11□□□□□ -1.43
TRAPPC4-213ENST00000533149 C8orf87E5RJ46 101 aa6.09□□□□□ -1.43
TRAPPC4-213ENST00000533149 LINC00313P59037 77 aa6.09□□□□□ -1.43
TRAPPC4-213ENST00000533149 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
TRAPPC4-213ENST00000533149 MMP24-AS1A0A0U1RRL7 71 aa6.08□□□□□ -1.44
TRAPPC4-213ENST00000533149 HCG22E2RYF7 251 aa6.08□□□□□ -1.44
TRAPPC4-213ENST00000533149 COX6B2Q6YFQ2 88 aa6.08□□□□□ -1.44
TRAPPC4-213ENST00000533149 WFDC13Q8IUB5 93 aa6.08□□□□□ -1.44
TRAPPC4-213ENST00000533149 CASC2Q6XLA1 102 aa6.06□□□□□ -1.44
TRAPPC4-213ENST00000533149 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
TRAPPC4-213ENST00000533149 hDV103S1A0JD37 113 aa6.05□□□□□ -1.44
TRAPPC4-213ENST00000533149 FAM236AA0A1B0GUQ0 79 aa6.04□□□□□ -1.44
TRAPPC4-213ENST00000533149 FAM236BA0A1B0GV22 79 aa6.04□□□□□ -1.44
TRAPPC4-213ENST00000533149 C9orf92A6NGG3 77 aa6.04□□□□□ -1.44
TRAPPC4-213ENST00000533149 TMEM254Q8TBM7 123 aa6.03□□□□□ -1.44
TRAPPC4-213ENST00000533149 KRTAP16-1A8MUX0 517 aa6.02□□□□□ -1.45
TRAPPC4-213ENST00000533149 SCGB1A1P11684 91 aa6.02□□□□□ -1.45
TRAPPC4-213ENST00000533149 MRPL34Q9BQ48 92 aaKnown RBP6.02□□□□□ -1.45
TRAPPC4-213ENST00000533149 SSPOA2VEC9 5147 aa6□□□□□ -1.45
TRAPPC4-213ENST00000533149 Q8N9P0 234 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC4-213ENST00000533149 USH2AO75445 5202 aa5.97□□□□□ -1.45
TRAPPC4-213ENST00000533149 ATOX1O00244 68 aa5.97□□□□□ -1.45
TRAPPC4-213ENST00000533149 NDUFS5O43920 106 aa5.97□□□□□ -1.45
TRAPPC4-213ENST00000533149 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.45
TRAPPC4-213ENST00000533149 A8MUU9 505 aa5.95□□□□□ -1.46
TRAPPC4-213ENST00000533149 OCR1Q9BZK8 76 aa5.95□□□□□ -1.46
TRAPPC4-213ENST00000533149 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
TRAPPC4-213ENST00000533149 SMIM20Q8N5G0 67 aa5.94□□□□□ -1.46
TRAPPC4-213ENST00000533149 C20orf166-AS1Q96NR2 134 aa5.94□□□□□ -1.46
TRAPPC4-213ENST00000533149 TRAV7A0A075B6U4 112 aa5.93□□□□□ -1.46
TRAPPC4-213ENST00000533149 TP53AIP1Q9HCN2 124 aa5.93□□□□□ -1.46
TRAPPC4-213ENST00000533149 UQCRQO14949 82 aa5.92□□□□□ -1.46
TRAPPC4-213ENST00000533149 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
TRAPPC4-213ENST00000533149 Q75L30 129 aa5.91□□□□□ -1.46
TRAPPC4-213ENST00000533149 ANAPC13Q9BS18 74 aa5.91□□□□□ -1.46
TRAPPC4-213ENST00000533149 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
TRAPPC4-213ENST00000533149 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
TRAPPC4-213ENST00000533149 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.46
TRAPPC4-213ENST00000533149 SERP2Q8N6R1 65 aa5.9□□□□□ -1.47
TRAPPC4-213ENST00000533149 Q5W150 140 aa5.89□□□□□ -1.47
TRAPPC4-213ENST00000533149 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
TRAPPC4-213ENST00000533149 H3BS24 57 aa5.87□□□□□ -1.47
TRAPPC4-213ENST00000533149 C5orf47Q569G3 176 aa5.87□□□□□ -1.47
TRAPPC4-213ENST00000533149 ZCCHC13Q8WW36 166 aaKnown RBP5.87□□□□□ -1.47
TRAPPC4-213ENST00000533149 COX7CP15954 63 aa5.86□□□□□ -1.47
TRAPPC4-213ENST00000533149 H0Y9P7 68 aa5.85□□□□□ -1.47
TRAPPC4-213ENST00000533149 ATP11AUNQ6ZP68 121 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms