RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 A8MUU9 505 aa11.62□□□□□ -0.55
PTPRK-222ENST00000532751 LCE2AQ5TA79 106 aaPredicted RBP11.62□□□□□ -0.55
PTPRK-222ENST00000532751 IGHV6-1A0A0B4J1U7 121 aa11.61□□□□□ -0.55
PTPRK-222ENST00000532751 A0A1B0GVX0 72 aa11.57□□□□□ -0.56
PTPRK-222ENST00000532751 PCP4L1A6NKN8 68 aa11.57□□□□□ -0.56
PTPRK-222ENST00000532751 C8orf87E5RJ46 101 aa11.57□□□□□ -0.56
PTPRK-222ENST00000532751 KRTAP16-1A8MUX0 517 aa11.54□□□□□ -0.56
PTPRK-222ENST00000532751 NDUFB1O75438 58 aa11.54□□□□□ -0.56
PTPRK-222ENST00000532751 NOTCH2NLQ7Z3S9 236 aa11.54□□□□□ -0.56
PTPRK-222ENST00000532751 NREPQ16612 68 aa11.52□□□□□ -0.57
PTPRK-222ENST00000532751 K7EP34 96 aa11.5□□□□□ -0.57
PTPRK-222ENST00000532751 A8MWP4 228 aa11.47□□□□□ -0.57
PTPRK-222ENST00000532751 KRTAP19-2Q3LHN2 52 aa11.47□□□□□ -0.57
PTPRK-222ENST00000532751 SMCPP49901 116 aaPredicted RBP11.46□□□□□ -0.57
PTPRK-222ENST00000532751 LCE2CQ5TA81 110 aa11.45□□□□□ -0.58
PTPRK-222ENST00000532751 GTF2H5Q6ZYL4 71 aa11.44□□□□□ -0.58
PTPRK-222ENST00000532751 COX6B2Q6YFQ2 88 aa11.43□□□□□ -0.58
PTPRK-222ENST00000532751 PRO0461Q9UI25 63 aa11.42□□□□□ -0.58
PTPRK-222ENST00000532751 IGKV3D-7A0A0C4DH55 119 aa11.4□□□□□ -0.58
PTPRK-222ENST00000532751 C8orf17Q9NRJ1 99 aa11.4□□□□□ -0.58
PTPRK-222ENST00000532751 PRR15Q8IV56 129 aa11.37□□□□□ -0.59
PTPRK-222ENST00000532751 BPY2O14599 106 aa11.33□□□□□ -0.6
PTPRK-222ENST00000532751 MT1HP80294 61 aa11.33□□□□□ -0.6
PTPRK-222ENST00000532751 Q8N9P0 234 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-222ENST00000532751 F8W1H4 67 aa11.31□□□□□ -0.6
PTPRK-222ENST00000532751 Q6ZVQ6 151 aa11.31□□□□□ -0.6
PTPRK-222ENST00000532751 ZCCHC13Q8WW36 166 aaKnown RBP11.29□□□□□ -0.6
PTPRK-222ENST00000532751 K7EQZ3 153 aa11.27□□□□□ -0.61
PTPRK-222ENST00000532751 MMP24-AS1A0A0U1RRL7 71 aa11.26□□□□□ -0.61
PTPRK-222ENST00000532751 TMEM254Q8TBM7 123 aa11.25□□□□□ -0.61
PTPRK-222ENST00000532751 UBL5Q9BZL1 73 aa11.25□□□□□ -0.61
PTPRK-222ENST00000532751 MRPL34Q9BQ48 92 aaKnown RBP11.23□□□□□ -0.61
PTPRK-222ENST00000532751 hDV103S1A0JD37 113 aa11.22□□□□□ -0.61
PTPRK-222ENST00000532751 M0R2T5 61 aa11.22□□□□□ -0.61
PTPRK-222ENST00000532751 LINC00846Q9NV44 126 aa11.22□□□□□ -0.61
PTPRK-222ENST00000532751 ETDBQ3ZM63 59 aa11.21□□□□□ -0.61
PTPRK-222ENST00000532751 RBM12B-AS1Q9P1G2 102 aa11.17□□□□□ -0.62
PTPRK-222ENST00000532751 FAM236DA0A1B0GTK5 79 aa11.15□□□□□ -0.62
PTPRK-222ENST00000532751 NDUFS5O43920 106 aa11.15□□□□□ -0.62
PTPRK-222ENST00000532751 FAM236CP0DP71 79 aa11.15□□□□□ -0.62
PTPRK-222ENST00000532751 HRES1P13985 223 aa11.15□□□□□ -0.62
PTPRK-222ENST00000532751 Q8N9L7 120 aa11.14□□□□□ -0.63
PTPRK-222ENST00000532751 FLGP20930 4061 aaPredicted RBP11.14□□□□□ -0.63
PTPRK-222ENST00000532751 SPINK7P58062 85 aa11.12□□□□□ -0.63
PTPRK-222ENST00000532751 WFDC13Q8IUB5 93 aa11.11□□□□□ -0.63
PTPRK-222ENST00000532751 KRTAP9-2Q9BYQ4 174 aa11.11□□□□□ -0.63
PTPRK-222ENST00000532751 CASC2Q6XLA1 102 aa11.1□□□□□ -0.63
PTPRK-222ENST00000532751 MPLKIPQ8TAP9 179 aa11.1□□□□□ -0.63
PTPRK-222ENST00000532751 KRTAP10-6P60371 365 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-222ENST00000532751 LORP23490 312 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-222ENST00000532751 HCG22E2RYF7 251 aa11.01□□□□□ -0.65
PTPRK-222ENST00000532751 CXCL6P80162 114 aa11.01□□□□□ -0.65
PTPRK-222ENST00000532751 ACYP1P07311 99 aa10.99□□□□□ -0.65
PTPRK-222ENST00000532751 LCE2DQ5TA82 110 aaPredicted RBP10.96□□□□□ -0.65
PTPRK-222ENST00000532751 A0A1B0GV90 55 aa10.93□□□□□ -0.66
PTPRK-222ENST00000532751 Q5W150 140 aa10.93□□□□□ -0.66
PTPRK-222ENST00000532751 FAM240AA0A1B0GVK7 77 aa10.92□□□□□ -0.66
PTPRK-222ENST00000532751 IGKV2D-30A0A075B6S6 120 aa10.9□□□□□ -0.66
PTPRK-222ENST00000532751 IGKV2-30P06310 120 aa10.9□□□□□ -0.66
PTPRK-222ENST00000532751 C7orf65Q6ZTY9 151 aa10.9□□□□□ -0.66
PTPRK-222ENST00000532751 ATP5EP2Q5VTU8 51 aa10.83□□□□□ -0.68
PTPRK-222ENST00000532751 TP53AIP1Q9HCN2 124 aa10.82□□□□□ -0.68
PTPRK-222ENST00000532751 KRTAP9-8Q9BYQ0 159 aa10.75□□□□□ -0.69
PTPRK-222ENST00000532751 HIST1H4AP62805 103 aaKnown RBP10.74□□□□□ -0.69
PTPRK-222ENST00000532751 H1FX-AS1Q4G0G2 97 aa10.72□□□□□ -0.69
PTPRK-222ENST00000532751 LINC00643Q86TS7 51 aa10.72□□□□□ -0.69
PTPRK-222ENST00000532751 J3QR89 54 aa10.67□□□□□ -0.7
PTPRK-222ENST00000532751 KRTAP9-6A0A140TA67 174 aa10.66□□□□□ -0.7
PTPRK-222ENST00000532751 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
PTPRK-222ENST00000532751 MT2AP02795 61 aa10.63□□□□□ -0.71
PTPRK-222ENST00000532751 TRAV22A0A0B4J277 110 aa10.6□□□□□ -0.71
PTPRK-222ENST00000532751 A0A087WVE0 104 aa10.57□□□□□ -0.72
PTPRK-222ENST00000532751 UQCRQO14949 82 aa10.55□□□□□ -0.72
PTPRK-222ENST00000532751 KRTAP10-10P60014 251 aa10.55□□□□□ -0.72
PTPRK-222ENST00000532751 CRCT1Q9UGL9 99 aa10.55□□□□□ -0.72
PTPRK-222ENST00000532751 MT1FP04733 61 aa10.54□□□□□ -0.72
PTPRK-222ENST00000532751 LOC101927531A0A1B0GV80 90 aa10.53□□□□□ -0.72
PTPRK-222ENST00000532751 C1orf64Q8NEQ6 169 aa10.52□□□□□ -0.73
PTPRK-222ENST00000532751 CYP4F30PQ9H0H9 118 aa10.52□□□□□ -0.73
PTPRK-222ENST00000532751 FSIP2Q5CZC0 6907 aa10.49□□□□□ -0.73
PTPRK-222ENST00000532751 ATOX1O00244 68 aa10.49□□□□□ -0.73
PTPRK-222ENST00000532751 H0Y9P7 68 aa10.47□□□□□ -0.73
PTPRK-222ENST00000532751 KRTAP3-1Q9BYR8 98 aa10.46□□□□□ -0.73
PTPRK-222ENST00000532751 S4R3F8 94 aa10.42□□□□□ -0.74
PTPRK-222ENST00000532751 KRTAP9-3Q9BYQ3 159 aa10.41□□□□□ -0.74
PTPRK-222ENST00000532751 OCR1Q9BZK8 76 aa10.36□□□□□ -0.75
PTPRK-222ENST00000532751 K7ERU9 68 aa10.35□□□□□ -0.75
PTPRK-222ENST00000532751 MP68P56378 58 aa10.35□□□□□ -0.75
PTPRK-222ENST00000532751 C5orf47Q569G3 176 aa10.35□□□□□ -0.75
PTPRK-222ENST00000532751 LINC00208Q96KT6 92 aa10.33□□□□□ -0.76
PTPRK-222ENST00000532751 LCA10Q71F78 164 aa10.32□□□□□ -0.76
PTPRK-222ENST00000532751 CSAG1Q6PB30 78 aa10.31□□□□□ -0.76
PTPRK-222ENST00000532751 SCGB1A1P11684 91 aa10.3□□□□□ -0.76
PTPRK-222ENST00000532751 LCE2BO14633 110 aa10.29□□□□□ -0.76
PTPRK-222ENST00000532751 USH2AO75445 5202 aa10.29□□□□□ -0.76
PTPRK-222ENST00000532751 IMUPQ9GZP8 106 aa10.26□□□□□ -0.77
PTPRK-222ENST00000532751 H3BPC8 53 aa10.22□□□□□ -0.77
PTPRK-222ENST00000532751 MT-ATP8P03928 68 aa10.2□□□□□ -0.78
PTPRK-222ENST00000532751 KLKP1Q107X0 134 aa10.2□□□□□ -0.78
PTPRK-222ENST00000532751 FAM236AA0A1B0GUQ0 79 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms