RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 F8W1H4 67 aa8.33□□□□□ -1.08
CCS-206ENST00000530961 SIGMAR1Q99720 223 aa8.32□□□□□ -1.08
CCS-206ENST00000530961 MUC17Q685J3 4493 aa8.31□□□□□ -1.08
CCS-206ENST00000530961 J3KT08 172 aa8.3□□□□□ -1.08
CCS-206ENST00000530961 DEFB116Q30KQ4 102 aa8.3□□□□□ -1.08
CCS-206ENST00000530961 NREPQ16612 68 aa8.27□□□□□ -1.09
CCS-206ENST00000530961 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
CCS-206ENST00000530961 LINC00313P59037 77 aa8.24□□□□□ -1.09
CCS-206ENST00000530961 NDUFB1O75438 58 aa8.23□□□□□ -1.09
CCS-206ENST00000530961 Q75L30 129 aa8.23□□□□□ -1.09
CCS-206ENST00000530961 DSCR10P59022 87 aa8.22□□□□□ -1.09
CCS-206ENST00000530961 IGHV6-1A0A0B4J1U7 121 aa8.21□□□□□ -1.1
CCS-206ENST00000530961 A0A1B0GVX0 72 aa8.21□□□□□ -1.1
CCS-206ENST00000530961 ETDBQ3ZM63 59 aa8.21□□□□□ -1.1
CCS-206ENST00000530961 PCOTHQ58A44 107 aa8.21□□□□□ -1.1
CCS-206ENST00000530961 A8MWP4 228 aa8.2□□□□□ -1.1
CCS-206ENST00000530961 C8orf87E5RJ46 101 aa8.2□□□□□ -1.1
CCS-206ENST00000530961 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
CCS-206ENST00000530961 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.18□□□□□ -1.1
CCS-206ENST00000530961 A8MUU9 505 aa8.17□□□□□ -1.1
CCS-206ENST00000530961 ATP11AUNQ6ZP68 121 aa8.16□□□□□ -1.1
CCS-206ENST00000530961 NOTCH2NLQ7Z3S9 236 aa8.16□□□□□ -1.1
CCS-206ENST00000530961 A0A1B0GV90 55 aa8.15□□□□□ -1.1
CCS-206ENST00000530961 Q6ZVQ6 151 aa8.15□□□□□ -1.1
CCS-206ENST00000530961 IGKV3D-7A0A0C4DH55 119 aa8.14□□□□□ -1.11
CCS-206ENST00000530961 KRTAP16-1A8MUX0 517 aa8.14□□□□□ -1.11
CCS-206ENST00000530961 BPY2O14599 106 aa8.14□□□□□ -1.11
CCS-206ENST00000530961 PRR15Q8IV56 129 aa8.14□□□□□ -1.11
CCS-206ENST00000530961 UBL5Q9BZL1 73 aa8.14□□□□□ -1.11
CCS-206ENST00000530961 LINC00846Q9NV44 126 aa8.13□□□□□ -1.11
CCS-206ENST00000530961 KRTAP4-1Q9BYQ7 146 aa8.12□□□□□ -1.11
CCS-206ENST00000530961 C8orf17Q9NRJ1 99 aa8.1□□□□□ -1.11
CCS-206ENST00000530961 K7EQZ3 153 aa8.06□□□□□ -1.12
CCS-206ENST00000530961 ACYP1P07311 99 aa8.06□□□□□ -1.12
CCS-206ENST00000530961 Q8N9P0 234 aaPredicted RBP8.04□□□□□ -1.12
CCS-206ENST00000530961 FAM240AA0A1B0GVK7 77 aa8.03□□□□□ -1.12
CCS-206ENST00000530961 MMP24-AS1A0A0U1RRL7 71 aa8.02□□□□□ -1.13
CCS-206ENST00000530961 TMEM254Q8TBM7 123 aa8.02□□□□□ -1.13
CCS-206ENST00000530961 hDV103S1A0JD37 113 aa8.01□□□□□ -1.13
CCS-206ENST00000530961 MRPL34Q9BQ48 92 aaKnown RBP8□□□□□ -1.13
CCS-206ENST00000530961 CXCL6P80162 114 aa7.99□□□□□ -1.13
CCS-206ENST00000530961 Q8N9L7 120 aa7.99□□□□□ -1.13
CCS-206ENST00000530961 ZCCHC13Q8WW36 166 aaKnown RBP7.96□□□□□ -1.14
CCS-206ENST00000530961 CASC2Q6XLA1 102 aa7.94□□□□□ -1.14
CCS-206ENST00000530961 J3QR89 54 aa7.92□□□□□ -1.14
CCS-206ENST00000530961 WFDC13Q8IUB5 93 aa7.92□□□□□ -1.14
CCS-206ENST00000530961 HCG22E2RYF7 251 aa7.91□□□□□ -1.14
CCS-206ENST00000530961 NDUFS5O43920 106 aa7.91□□□□□ -1.14
CCS-206ENST00000530961 ATP5EP2Q5VTU8 51 aa7.91□□□□□ -1.14
CCS-206ENST00000530961 KRTAP19-2Q3LHN2 52 aa7.9□□□□□ -1.14
CCS-206ENST00000530961 LCE2CQ5TA81 110 aa7.87□□□□□ -1.15
CCS-206ENST00000530961 LINC00643Q86TS7 51 aa7.87□□□□□ -1.15
CCS-206ENST00000530961 COX6B2Q6YFQ2 88 aa7.85□□□□□ -1.15
CCS-206ENST00000530961 SPINK7P58062 85 aa7.84□□□□□ -1.15
CCS-206ENST00000530961 HRES1P13985 223 aa7.8□□□□□ -1.16
CCS-206ENST00000530961 HIST1H4AP62805 103 aaKnown RBP7.8□□□□□ -1.16
CCS-206ENST00000530961 TP53AIP1Q9HCN2 124 aa7.79□□□□□ -1.16
CCS-206ENST00000530961 Q5W150 140 aa7.78□□□□□ -1.16
CCS-206ENST00000530961 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
CCS-206ENST00000530961 MPLKIPQ8TAP9 179 aa7.77□□□□□ -1.17
CCS-206ENST00000530961 MT1HP80294 61 aa7.76□□□□□ -1.17
CCS-206ENST00000530961 K7ERU9 68 aa7.74□□□□□ -1.17
CCS-206ENST00000530961 FAM236DA0A1B0GTK5 79 aa7.72□□□□□ -1.17
CCS-206ENST00000530961 FAM236CP0DP71 79 aa7.72□□□□□ -1.17
CCS-206ENST00000530961 C7orf65Q6ZTY9 151 aa7.71□□□□□ -1.18
CCS-206ENST00000530961 SSPOA2VEC9 5147 aa7.7□□□□□ -1.18
CCS-206ENST00000530961 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
CCS-206ENST00000530961 IGKV2-30P06310 120 aa7.7□□□□□ -1.18
CCS-206ENST00000530961 A0A087WVE0 104 aa7.68□□□□□ -1.18
CCS-206ENST00000530961 M0R2T5 61 aa7.66□□□□□ -1.18
CCS-206ENST00000530961 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
CCS-206ENST00000530961 SYNE2Q8WXH0 6885 aaKnown RBP7.64□□□□□ -1.19
CCS-206ENST00000530961 UQCRQO14949 82 aa7.64□□□□□ -1.19
CCS-206ENST00000530961 FCGBPQ9Y6R7 5405 aaPredicted RBP7.63□□□□□ -1.19
CCS-206ENST00000530961 FLGP20930 4061 aaPredicted RBP7.62□□□□□ -1.19
CCS-206ENST00000530961 TRAV22A0A0B4J277 110 aa7.61□□□□□ -1.19
CCS-206ENST00000530961 KRTAP10-6P60371 365 aaPredicted RBP7.61□□□□□ -1.19
CCS-206ENST00000530961 IMUPQ9GZP8 106 aa7.61□□□□□ -1.19
CCS-206ENST00000530961 USH2AO75445 5202 aa7.61□□□□□ -1.19
CCS-206ENST00000530961 ATOX1O00244 68 aa7.57□□□□□ -1.2
CCS-206ENST00000530961 LOC101927531A0A1B0GV80 90 aa7.56□□□□□ -1.2
CCS-206ENST00000530961 MT-ATP8P03928 68 aa7.55□□□□□ -1.2
CCS-206ENST00000530961 OCR1Q9BZK8 76 aa7.55□□□□□ -1.2
CCS-206ENST00000530961 CYP4F30PQ9H0H9 118 aa7.55□□□□□ -1.2
CCS-206ENST00000530961 MACF1Q9UPN3 7388 aaKnown RBP7.55□□□□□ -1.2
CCS-206ENST00000530961 SCGB1A1P11684 91 aa7.54□□□□□ -1.2
CCS-206ENST00000530961 H1FX-AS1Q4G0G2 97 aa7.54□□□□□ -1.2
CCS-206ENST00000530961 H0Y9P7 68 aa7.53□□□□□ -1.2
CCS-206ENST00000530961 C4orf26Q17RF5 130 aa7.53□□□□□ -1.2
CCS-206ENST00000530961 C5orf47Q569G3 176 aa7.5□□□□□ -1.21
CCS-206ENST00000530961 MP68P56378 58 aa7.49□□□□□ -1.21
CCS-206ENST00000530961 C1orf64Q8NEQ6 169 aa7.47□□□□□ -1.21
CCS-206ENST00000530961 LINC00208Q96KT6 92 aa7.45□□□□□ -1.22
CCS-206ENST00000530961 H3BPC8 53 aa7.44□□□□□ -1.22
CCS-206ENST00000530961 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
CCS-206ENST00000530961 SMIM20Q8N5G0 67 aa7.42□□□□□ -1.22
CCS-206ENST00000530961 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
CCS-206ENST00000530961 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
CCS-206ENST00000530961 KRTAP9-8Q9BYQ0 159 aa7.4□□□□□ -1.22
CCS-206ENST00000530961 TRAV7A0A075B6U4 112 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms