RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 A0A1B0GV90 55 aa7.69□□□□□ -1.18
CHMP4A-203ENST00000527154 H3BQ85 93 aa7.69□□□□□ -1.18
CHMP4A-203ENST00000527154 COX6CP09669 75 aa7.69□□□□□ -1.18
CHMP4A-203ENST00000527154 NDUFV3P56181 108 aaKnown RBP7.69□□□□□ -1.18
CHMP4A-203ENST00000527154 TRIAP1O43715 76 aa7.68□□□□□ -1.18
CHMP4A-203ENST00000527154 M0R143 59 aa7.67□□□□□ -1.18
CHMP4A-203ENST00000527154 PSMB2P49721 201 aa7.67□□□□□ -1.18
CHMP4A-203ENST00000527154 MTURNQ8N3F0 131 aa7.66□□□□□ -1.18
CHMP4A-203ENST00000527154 SIGMAR1Q99720 223 aa7.66□□□□□ -1.18
CHMP4A-203ENST00000527154 K7ERJ3 54 aa7.65□□□□□ -1.18
CHMP4A-203ENST00000527154 DNAL4O96015 105 aa7.65□□□□□ -1.18
CHMP4A-203ENST00000527154 FAM218AQ96MZ4 157 aa7.65□□□□□ -1.18
CHMP4A-203ENST00000527154 H3BMG7 143 aa7.64□□□□□ -1.19
CHMP4A-203ENST00000527154 LINC00313P59037 77 aa7.64□□□□□ -1.19
CHMP4A-203ENST00000527154 FABP2P12104 132 aa7.61□□□□□ -1.19
CHMP4A-203ENST00000527154 ORMDL1Q9P0S3 153 aa7.6□□□□□ -1.19
CHMP4A-203ENST00000527154 A0A1W2PNM2 257 aa7.59□□□□□ -1.19
CHMP4A-203ENST00000527154 IGKV4-1P06312 121 aa7.59□□□□□ -1.19
CHMP4A-203ENST00000527154 TMEM256-PLSCR3K7ERE1 68 aa7.58□□□□□ -1.2
CHMP4A-203ENST00000527154 TRACP01848 142 aa7.58□□□□□ -1.2
CHMP4A-203ENST00000527154 KRTAP2-3P0C7H8 128 aa7.58□□□□□ -1.2
CHMP4A-203ENST00000527154 KRTAP2-4Q9BYR9 128 aa7.58□□□□□ -1.2
CHMP4A-203ENST00000527154 SCGB1C2P0DMR2 95 aa7.57□□□□□ -1.2
CHMP4A-203ENST00000527154 A6NN06 94 aa7.55□□□□□ -1.2
CHMP4A-203ENST00000527154 UBE2V1Q13404 147 aa7.54□□□□□ -1.2
CHMP4A-203ENST00000527154 LYRM7Q5U5X0 104 aa7.54□□□□□ -1.2
CHMP4A-203ENST00000527154 TRBV7-4A0A0J9YYF1 115 aa7.53□□□□□ -1.2
CHMP4A-203ENST00000527154 SPINK7P58062 85 aa7.53□□□□□ -1.2
CHMP4A-203ENST00000527154 DEFB116Q30KQ4 102 aa7.53□□□□□ -1.2
CHMP4A-203ENST00000527154 ANKRD29Q8N6D5 301 aa7.53□□□□□ -1.2
CHMP4A-203ENST00000527154 A0A1B0GV72 72 aa7.52□□□□□ -1.21
CHMP4A-203ENST00000527154 IGHV6-1A0A0B4J1U7 121 aa7.51□□□□□ -1.21
CHMP4A-203ENST00000527154 ATXN8Q156A1 80 aa7.5□□□□□ -1.21
CHMP4A-203ENST00000527154 MT1BP07438 61 aa7.49□□□□□ -1.21
CHMP4A-203ENST00000527154 COL5A1-AS1Q5SY13 56 aa7.49□□□□□ -1.21
CHMP4A-203ENST00000527154 LINC00472Q9H8W2 130 aa7.49□□□□□ -1.21
CHMP4A-203ENST00000527154 ZCCHC13Q8WW36 166 aaKnown RBP7.47□□□□□ -1.21
CHMP4A-203ENST00000527154 CCKP06307 115 aa7.46□□□□□ -1.22
CHMP4A-203ENST00000527154 PCP4P48539 62 aa7.45□□□□□ -1.22
CHMP4A-203ENST00000527154 C21orf62-AS1Q17RA5 79 aa7.45□□□□□ -1.22
CHMP4A-203ENST00000527154 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
CHMP4A-203ENST00000527154 BATFQ16520 125 aa7.44□□□□□ -1.22
CHMP4A-203ENST00000527154 C8orf87E5RJ46 101 aa7.43□□□□□ -1.22
CHMP4A-203ENST00000527154 BAALC-AS2P0C853 105 aa7.43□□□□□ -1.22
CHMP4A-203ENST00000527154 RBM3P98179 157 aaKnown RBP7.43□□□□□ -1.22
CHMP4A-203ENST00000527154 DSCR8Q96T75 97 aa7.43□□□□□ -1.22
CHMP4A-203ENST00000527154 WFDC13Q8IUB5 93 aa7.42□□□□□ -1.22
CHMP4A-203ENST00000527154 A0A1B0GVX0 72 aa7.41□□□□□ -1.22
CHMP4A-203ENST00000527154 JMJD7-PLA2G4BH0Y9G9 81 aa7.4□□□□□ -1.22
CHMP4A-203ENST00000527154 NAA38Q9BRA0 125 aaKnown RBP7.4□□□□□ -1.22
CHMP4A-203ENST00000527154 C9orf118A6NHY6 69 aa7.39□□□□□ -1.23
CHMP4A-203ENST00000527154 VPS25Q9BRG1 176 aa7.39□□□□□ -1.23
CHMP4A-203ENST00000527154 C9JAW5 83 aa7.38□□□□□ -1.23
CHMP4A-203ENST00000527154 PDE6GP18545 87 aa7.38□□□□□ -1.23
CHMP4A-203ENST00000527154 KRTAP19-8Q3LI54 63 aa7.38□□□□□ -1.23
CHMP4A-203ENST00000527154 A0A1B0GW54 56 aa7.37□□□□□ -1.23
CHMP4A-203ENST00000527154 TAX1BP3O14907 124 aa7.36□□□□□ -1.23
CHMP4A-203ENST00000527154 A0A1W2PPM0 123 aa7.35□□□□□ -1.23
CHMP4A-203ENST00000527154 LOC110117498A0A087WWA1 95 aa7.34□□□□□ -1.23
CHMP4A-203ENST00000527154 H3BT86 120 aa7.33□□□□□ -1.24
CHMP4A-203ENST00000527154 H1FX-AS1Q4G0G2 97 aa7.33□□□□□ -1.24
CHMP4A-203ENST00000527154 J3KT08 172 aa7.32□□□□□ -1.24
CHMP4A-203ENST00000527154 Q5VV11 94 aa7.32□□□□□ -1.24
CHMP4A-203ENST00000527154 Q6ZQT0 140 aa7.3□□□□□ -1.24
CHMP4A-203ENST00000527154 SPRR2GQ9BYE4 73 aa7.3□□□□□ -1.24
CHMP4A-203ENST00000527154 KRTAP2-2Q9BYT5 123 aa7.3□□□□□ -1.24
CHMP4A-203ENST00000527154 KRTAP2-1Q9BYU5 128 aa7.3□□□□□ -1.24
CHMP4A-203ENST00000527154 NDUFB1O75438 58 aa7.28□□□□□ -1.24
CHMP4A-203ENST00000527154 SPCS1Q9Y6A9 102 aa7.26□□□□□ -1.25
CHMP4A-203ENST00000527154 K7ERU9 68 aa7.25□□□□□ -1.25
CHMP4A-203ENST00000527154 C14orf132Q9NPU4 83 aa7.25□□□□□ -1.25
CHMP4A-203ENST00000527154 C8orf17Q9NRJ1 99 aa7.24□□□□□ -1.25
CHMP4A-203ENST00000527154 SPRR2EP22531 72 aa7.22□□□□□ -1.25
CHMP4A-203ENST00000527154 SPRR2BP35325 72 aa7.22□□□□□ -1.25
CHMP4A-203ENST00000527154 SPRR2AP35326 72 aa7.22□□□□□ -1.25
CHMP4A-203ENST00000527154 GTF2H5Q6ZYL4 71 aa7.2□□□□□ -1.26
CHMP4A-203ENST00000527154 Q6ZVQ6 151 aa7.19□□□□□ -1.26
CHMP4A-203ENST00000527154 IGKV3D-7A0A0C4DH55 119 aa7.18□□□□□ -1.26
CHMP4A-203ENST00000527154 K7EP34 96 aa7.18□□□□□ -1.26
CHMP4A-203ENST00000527154 NREPQ16612 68 aa7.17□□□□□ -1.26
CHMP4A-203ENST00000527154 SPRR2FQ96RM1 72 aa7.17□□□□□ -1.26
CHMP4A-203ENST00000527154 SCGB1A1P11684 91 aa7.16□□□□□ -1.26
CHMP4A-203ENST00000527154 GPR98Q8WXG9 6306 aa7.15□□□□□ -1.26
CHMP4A-203ENST00000527154 SMCPP49901 116 aaPredicted RBP7.14□□□□□ -1.27
CHMP4A-203ENST00000527154 LCE1AQ5T7P2 110 aa7.13□□□□□ -1.27
CHMP4A-203ENST00000527154 PRR15Q8IV56 129 aa7.12□□□□□ -1.27
CHMP4A-203ENST00000527154 PRO0461Q9UI25 63 aa7.12□□□□□ -1.27
CHMP4A-203ENST00000527154 MRPL34Q9BQ48 92 aaKnown RBP7.1□□□□□ -1.27
CHMP4A-203ENST00000527154 TMEM254Q8TBM7 123 aa7.09□□□□□ -1.27
CHMP4A-203ENST00000527154 MMP24-AS1A0A0U1RRL7 71 aa7.08□□□□□ -1.28
CHMP4A-203ENST00000527154 FAM236AA0A1B0GUQ0 79 aa7.08□□□□□ -1.28
CHMP4A-203ENST00000527154 FAM236BA0A1B0GV22 79 aa7.08□□□□□ -1.28
CHMP4A-203ENST00000527154 F8W1H4 67 aa7.08□□□□□ -1.28
CHMP4A-203ENST00000527154 J3QR89 54 aa7.07□□□□□ -1.28
CHMP4A-203ENST00000527154 NDUFS5O43920 106 aa7.07□□□□□ -1.28
CHMP4A-203ENST00000527154 SVIPQ8NHG7 77 aa7.07□□□□□ -1.28
CHMP4A-203ENST00000527154 BPY2O14599 106 aa7.06□□□□□ -1.28
CHMP4A-203ENST00000527154 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
CHMP4A-203ENST00000527154 IGKV2-30P06310 120 aa7.05□□□□□ -1.28
CHMP4A-203ENST00000527154 hDV103S1A0JD37 113 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms