RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 Q75L30 129 aa5.04□□□□□ -1.6
CHD7-203ENST00000525508 HRES1P13985 223 aa5.04□□□□□ -1.6
CHD7-203ENST00000525508 MMP24-AS1A0A0U1RRL7 71 aa5.03□□□□□ -1.6
CHD7-203ENST00000525508 TGP01266 2768 aa5.02□□□□□ -1.61
CHD7-203ENST00000525508 Q5VV11 94 aa5.02□□□□□ -1.61
CHD7-203ENST00000525508 LINC00472Q9H8W2 130 aa5□□□□□ -1.61
CHD7-203ENST00000525508 M0R2T5 61 aa4.98□□□□□ -1.61
CHD7-203ENST00000525508 Q5VSD8 79 aa4.98□□□□□ -1.61
CHD7-203ENST00000525508 CRIPTQ9P021 101 aa4.97□□□□□ -1.61
CHD7-203ENST00000525508 CSMD1Q96PZ7 3565 aa4.97□□□□□ -1.61
CHD7-203ENST00000525508 LINC01558Q9Y6Z2 57 aa4.97□□□□□ -1.61
CHD7-203ENST00000525508 SMG1Q96Q15 3661 aaKnown RBP4.97□□□□□ -1.61
CHD7-203ENST00000525508 LCE6AA0A183 80 aa4.96□□□□□ -1.62
CHD7-203ENST00000525508 KRTAP11-1Q8IUC1 163 aa4.96□□□□□ -1.62
CHD7-203ENST00000525508 A0A087X002 238 aa4.96□□□□□ -1.62
CHD7-203ENST00000525508 SPRR1BP22528 89 aa4.95□□□□□ -1.62
CHD7-203ENST00000525508 SPINK7P58062 85 aa4.95□□□□□ -1.62
CHD7-203ENST00000525508 OTOGQ6ZRI0 2925 aa4.95□□□□□ -1.62
CHD7-203ENST00000525508 Q5W150 140 aa4.95□□□□□ -1.62
CHD7-203ENST00000525508 ZCCHC13Q8WW36 166 aaKnown RBP4.95□□□□□ -1.62
CHD7-203ENST00000525508 SVEP1Q4LDE5 3571 aa4.93□□□□□ -1.62
CHD7-203ENST00000525508 KRTAP4-16G5E9R7 235 aaPredicted RBP4.92□□□□□ -1.62
CHD7-203ENST00000525508 Q6ZR54 194 aa4.92□□□□□ -1.62
CHD7-203ENST00000525508 A0A1B0GU33 70 aa4.91□□□□□ -1.62
CHD7-203ENST00000525508 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
CHD7-203ENST00000525508 CSMD2Q7Z408 3487 aa4.91□□□□□ -1.62
CHD7-203ENST00000525508 H3BS24 57 aa4.91□□□□□ -1.62
CHD7-203ENST00000525508 NOTCH2NLQ7Z3S9 236 aa4.91□□□□□ -1.62
CHD7-203ENST00000525508 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.63
CHD7-203ENST00000525508 NBPF19A0A087WUL8 3843 aa4.89□□□□□ -1.63
CHD7-203ENST00000525508 KRTAP7-1Q8IUC3 87 aa4.88□□□□□ -1.63
CHD7-203ENST00000525508 CSAG1Q6PB30 78 aa4.86□□□□□ -1.63
CHD7-203ENST00000525508 Q6ZRN7 208 aaPredicted RBP4.85□□□□□ -1.63
CHD7-203ENST00000525508 S4R3F8 94 aa4.82□□□□□ -1.64
CHD7-203ENST00000525508 LINC00483Q53H64 154 aa4.82□□□□□ -1.64
CHD7-203ENST00000525508 KRTAP29-1A8MX34 341 aaPredicted RBP4.82□□□□□ -1.64
CHD7-203ENST00000525508 R4GN34 69 aa4.81□□□□□ -1.64
CHD7-203ENST00000525508 A6NN06 94 aa4.81□□□□□ -1.64
CHD7-203ENST00000525508 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
CHD7-203ENST00000525508 A8MU10 97 aa4.78□□□□□ -1.64
CHD7-203ENST00000525508 ASB16-AS1Q495Z4 193 aa4.77□□□□□ -1.65
CHD7-203ENST00000525508 KRTAP13-2Q52LG2 175 aa4.76□□□□□ -1.65
CHD7-203ENST00000525508 COL7A1Q02388 2944 aa4.75□□□□□ -1.65
CHD7-203ENST00000525508 SPATA8Q6RVD6 105 aa4.75□□□□□ -1.65
CHD7-203ENST00000525508 DMAC1Q96GE9 116 aa4.73□□□□□ -1.65
CHD7-203ENST00000525508 M0QZ58 72 aa4.73□□□□□ -1.65
CHD7-203ENST00000525508 FBN3Q75N90 2809 aa4.72□□□□□ -1.65
CHD7-203ENST00000525508 SPENQ96T58 3664 aaKnown RBP4.7□□□□□ -1.66
CHD7-203ENST00000525508 KRTAP13-1Q8IUC0 172 aa4.69□□□□□ -1.66
CHD7-203ENST00000525508 ADM2Q7Z4H4 148 aa4.68□□□□□ -1.66
CHD7-203ENST00000525508 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
CHD7-203ENST00000525508 RPL37P61927 97 aaKnown RBP4.67□□□□□ -1.66
CHD7-203ENST00000525508 H1FX-AS1Q4G0G2 97 aa4.65□□□□□ -1.67
CHD7-203ENST00000525508 TRRAPQ9Y4A5 3859 aa4.6□□□□□ -1.67
CHD7-203ENST00000525508 MEGF8Q7Z7M0 2845 aa4.59□□□□□ -1.68
CHD7-203ENST00000525508 ROMO1P60602 79 aa4.57□□□□□ -1.68
CHD7-203ENST00000525508 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
CHD7-203ENST00000525508 C20orf166-AS1Q96NR2 134 aa4.56□□□□□ -1.68
CHD7-203ENST00000525508 A8MUU9 505 aa4.55□□□□□ -1.68
CHD7-203ENST00000525508 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
CHD7-203ENST00000525508 RPS29P62273 56 aaKnown RBP4.53□□□□□ -1.68
CHD7-203ENST00000525508 KRTAP21-3Q3LHN1 58 aa4.53□□□□□ -1.68
CHD7-203ENST00000525508 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
CHD7-203ENST00000525508 A0A1B0GVY2 172 aa4.46□□□□□ -1.7
CHD7-203ENST00000525508 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
CHD7-203ENST00000525508 KRTAP16-1A8MUX0 517 aa4.45□□□□□ -1.7
CHD7-203ENST00000525508 XP32Q5T750 250 aa4.45□□□□□ -1.7
CHD7-203ENST00000525508 NDUFAF8A1L188 74 aa4.4□□□□□ -1.7
CHD7-203ENST00000525508 CSMD3Q7Z407 3707 aa4.34□□□□□ -1.71
CHD7-203ENST00000525508 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
CHD7-203ENST00000525508 BSNQ9UPA5 3926 aa4.34□□□□□ -1.71
CHD7-203ENST00000525508 VPS13CQ709C8 3753 aa4.33□□□□□ -1.72
CHD7-203ENST00000525508 KRTAP10-8P60410 259 aa4.32□□□□□ -1.72
CHD7-203ENST00000525508 H0YAA0 97 aa4.31□□□□□ -1.72
CHD7-203ENST00000525508 P0C880 135 aa4.3□□□□□ -1.72
CHD7-203ENST00000525508 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
CHD7-203ENST00000525508 TNP1P09430 55 aa4.29□□□□□ -1.72
CHD7-203ENST00000525508 ANK3Q12955 4377 aaKnown RBP4.29□□□□□ -1.72
CHD7-203ENST00000525508 TPRXLQ17RH7 258 aa4.28□□□□□ -1.72
CHD7-203ENST00000525508 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
CHD7-203ENST00000525508 ZNF469Q96JG9 3925 aaPredicted RBP4.19□□□□□ -1.74
CHD7-203ENST00000525508 KRTAP3-1Q9BYR8 98 aa4.08□□□□□ -1.76
CHD7-203ENST00000525508 DNHD1Q96M86 4753 aa4.06□□□□□ -1.76
CHD7-203ENST00000525508 KRTAP12-2P59991 146 aa4.06□□□□□ -1.76
CHD7-203ENST00000525508 PP632Q6XCG6 107 aa4.04□□□□□ -1.76
CHD7-203ENST00000525508 KRTAP4-5Q9BYR2 181 aa4.02□□□□□ -1.77
CHD7-203ENST00000525508 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
CHD7-203ENST00000525508 HUWE1Q7Z6Z7 4374 aaKnown RBP3.98□□□□□ -1.77
CHD7-203ENST00000525508 MT1HL1P0DM35 61 aa3.98□□□□□ -1.77
CHD7-203ENST00000525508 KRTAP12-1P59990 96 aa3.97□□□□□ -1.77
CHD7-203ENST00000525508 KRTAP13-4Q3LI77 160 aa3.96□□□□□ -1.78
CHD7-203ENST00000525508 KRTAP10-6P60371 365 aaPredicted RBP3.91□□□□□ -1.78
CHD7-203ENST00000525508 DNAH5Q8TE73 4624 aa3.89□□□□□ -1.79
CHD7-203ENST00000525508 AKAP9Q99996 3911 aa3.88□□□□□ -1.79
CHD7-203ENST00000525508 KRTAP15-1Q3LI76 137 aa3.87□□□□□ -1.79
CHD7-203ENST00000525508 KRTAP10-4P60372 401 aaPredicted RBP3.87□□□□□ -1.79
CHD7-203ENST00000525508 DNAH11Q96DT5 4516 aa3.87□□□□□ -1.79
CHD7-203ENST00000525508 PLECQ15149 4684 aaKnown RBP3.84□□□□□ -1.79
CHD7-203ENST00000525508 FAT1Q14517 4588 aa3.84□□□□□ -1.79
CHD7-203ENST00000525508 DNAH9Q9NYC9 4486 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms