RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 HERC1Q15751 4861 aa8.8□□□□□ -1
TSPAN4-213ENST00000524895 IGHV6-1A0A0B4J1U7 121 aa8.8□□□□□ -1
TSPAN4-213ENST00000524895 A0A1B0GVX0 72 aa8.8□□□□□ -1
TSPAN4-213ENST00000524895 IGKV3D-7A0A0C4DH55 119 aa8.79□□□□□ -1
TSPAN4-213ENST00000524895 K7EQZ3 153 aa8.78□□□□□ -1
TSPAN4-213ENST00000524895 PRR15Q8IV56 129 aa8.77□□□□□ -1.01
TSPAN4-213ENST00000524895 Q8N9L7 120 aa8.77□□□□□ -1.01
TSPAN4-213ENST00000524895 C9orf92A6NGG3 77 aa8.76□□□□□ -1.01
TSPAN4-213ENST00000524895 TPRXLQ17RH7 258 aa8.75□□□□□ -1.01
TSPAN4-213ENST00000524895 KRTAP13-3Q3SY46 172 aa8.75□□□□□ -1.01
TSPAN4-213ENST00000524895 C8orf87E5RJ46 101 aa8.74□□□□□ -1.01
TSPAN4-213ENST00000524895 LINC00313P59037 77 aa8.73□□□□□ -1.01
TSPAN4-213ENST00000524895 C8orf17Q9NRJ1 99 aa8.71□□□□□ -1.02
TSPAN4-213ENST00000524895 HIST1H4AP62805 103 aaKnown RBP8.7□□□□□ -1.02
TSPAN4-213ENST00000524895 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
TSPAN4-213ENST00000524895 MMP24-AS1A0A0U1RRL7 71 aa8.68□□□□□ -1.02
TSPAN4-213ENST00000524895 HMCN2Q8NDA2 5059 aa8.66□□□□□ -1.02
TSPAN4-213ENST00000524895 MT-ATP8P03928 68 aa8.66□□□□□ -1.02
TSPAN4-213ENST00000524895 hDV103S1A0JD37 113 aa8.64□□□□□ -1.03
TSPAN4-213ENST00000524895 HCG22E2RYF7 251 aa8.64□□□□□ -1.03
TSPAN4-213ENST00000524895 XP32Q5T750 250 aa8.64□□□□□ -1.03
TSPAN4-213ENST00000524895 WFDC13Q8IUB5 93 aa8.64□□□□□ -1.03
TSPAN4-213ENST00000524895 KRTAP16-1A8MUX0 517 aa8.63□□□□□ -1.03
TSPAN4-213ENST00000524895 CASC2Q6XLA1 102 aa8.63□□□□□ -1.03
TSPAN4-213ENST00000524895 A0A087WVE0 104 aa8.62□□□□□ -1.03
TSPAN4-213ENST00000524895 TMEM254Q8TBM7 123 aa8.62□□□□□ -1.03
TSPAN4-213ENST00000524895 LPAP08519 4548 aa8.6□□□□□ -1.03
TSPAN4-213ENST00000524895 MRPL34Q9BQ48 92 aaKnown RBP8.59□□□□□ -1.03
TSPAN4-213ENST00000524895 IMUPQ9GZP8 106 aa8.59□□□□□ -1.03
TSPAN4-213ENST00000524895 C20orf166-AS1Q96NR2 134 aa8.57□□□□□ -1.04
TSPAN4-213ENST00000524895 A8MUU9 505 aa8.56□□□□□ -1.04
TSPAN4-213ENST00000524895 Q75L30 129 aa8.56□□□□□ -1.04
TSPAN4-213ENST00000524895 NDUFS5O43920 106 aa8.55□□□□□ -1.04
TSPAN4-213ENST00000524895 RPL37P61927 97 aaKnown RBP8.55□□□□□ -1.04
TSPAN4-213ENST00000524895 Q8N9P0 234 aaPredicted RBP8.54□□□□□ -1.04
TSPAN4-213ENST00000524895 LRP2P98164 4655 aa8.51□□□□□ -1.05
TSPAN4-213ENST00000524895 ATP11AUNQ6ZP68 121 aa8.48□□□□□ -1.05
TSPAN4-213ENST00000524895 SEC61BP60468 96 aaKnown RBP8.47□□□□□ -1.05
TSPAN4-213ENST00000524895 FAM236AA0A1B0GUQ0 79 aa8.46□□□□□ -1.06
TSPAN4-213ENST00000524895 FAM236BA0A1B0GV22 79 aa8.46□□□□□ -1.06
TSPAN4-213ENST00000524895 SCGB1A1P11684 91 aa8.45□□□□□ -1.06
TSPAN4-213ENST00000524895 PCOTHQ58A44 107 aa8.44□□□□□ -1.06
TSPAN4-213ENST00000524895 ZCCHC13Q8WW36 166 aaKnown RBP8.44□□□□□ -1.06
TSPAN4-213ENST00000524895 TP53AIP1Q9HCN2 124 aa8.44□□□□□ -1.06
TSPAN4-213ENST00000524895 UQCRQO14949 82 aa8.37□□□□□ -1.07
TSPAN4-213ENST00000524895 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
TSPAN4-213ENST00000524895 Q5W150 140 aa8.36□□□□□ -1.07
TSPAN4-213ENST00000524895 MUC17Q685J3 4493 aa8.36□□□□□ -1.07
TSPAN4-213ENST00000524895 ATOX1O00244 68 aa8.35□□□□□ -1.07
TSPAN4-213ENST00000524895 SMIM20Q8N5G0 67 aa8.34□□□□□ -1.07
TSPAN4-213ENST00000524895 TRAV22A0A0B4J277 110 aa8.33□□□□□ -1.08
TSPAN4-213ENST00000524895 UBR4Q5T4S7 5183 aa8.31□□□□□ -1.08
TSPAN4-213ENST00000524895 TRAV7A0A075B6U4 112 aa8.29□□□□□ -1.08
TSPAN4-213ENST00000524895 H0Y9P7 68 aa8.29□□□□□ -1.08
TSPAN4-213ENST00000524895 IGKV2D-30A0A075B6S6 120 aa8.26□□□□□ -1.09
TSPAN4-213ENST00000524895 IGKV2-30P06310 120 aa8.26□□□□□ -1.09
TSPAN4-213ENST00000524895 MP68P56378 58 aa8.26□□□□□ -1.09
TSPAN4-213ENST00000524895 C5orf47Q569G3 176 aa8.26□□□□□ -1.09
TSPAN4-213ENST00000524895 SPINK7P58062 85 aa8.25□□□□□ -1.09
TSPAN4-213ENST00000524895 KRTAP4-1Q9BYQ7 146 aa8.25□□□□□ -1.09
TSPAN4-213ENST00000524895 C7orf65Q6ZTY9 151 aa8.24□□□□□ -1.09
TSPAN4-213ENST00000524895 SERP2Q8N6R1 65 aa8.23□□□□□ -1.09
TSPAN4-213ENST00000524895 LOC101927531A0A1B0GV80 90 aa8.22□□□□□ -1.09
TSPAN4-213ENST00000524895 C1orf64Q8NEQ6 169 aa8.2□□□□□ -1.1
TSPAN4-213ENST00000524895 LINC00208Q96KT6 92 aa8.2□□□□□ -1.1
TSPAN4-213ENST00000524895 H3BPC8 53 aa8.19□□□□□ -1.1
TSPAN4-213ENST00000524895 ANAPC13Q9BS18 74 aa8.18□□□□□ -1.1
TSPAN4-213ENST00000524895 RNF213Q63HN8 5207 aa8.18□□□□□ -1.1
TSPAN4-213ENST00000524895 CYP4F30PQ9H0H9 118 aa8.15□□□□□ -1.1
TSPAN4-213ENST00000524895 HRES1P13985 223 aa8.13□□□□□ -1.11
TSPAN4-213ENST00000524895 COX7CP15954 63 aa8.13□□□□□ -1.11
TSPAN4-213ENST00000524895 MUC2Q02817 5179 aa8.12□□□□□ -1.11
TSPAN4-213ENST00000524895 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
TSPAN4-213ENST00000524895 A0A0U1RQV1 116 aa8.1□□□□□ -1.11
TSPAN4-213ENST00000524895 RBM12B-AS1Q9P1G2 102 aa8.08□□□□□ -1.12
TSPAN4-213ENST00000524895 SNURFQ9Y675 71 aa8.08□□□□□ -1.12
TSPAN4-213ENST00000524895 KLKP1Q107X0 134 aa8.06□□□□□ -1.12
TSPAN4-213ENST00000524895 MPLKIPQ8TAP9 179 aa8.06□□□□□ -1.12
TSPAN4-213ENST00000524895 FAM236DA0A1B0GTK5 79 aa8.04□□□□□ -1.12
TSPAN4-213ENST00000524895 FAM236CP0DP71 79 aa8.04□□□□□ -1.12
TSPAN4-213ENST00000524895 C4orf26Q17RF5 130 aa8.04□□□□□ -1.12
TSPAN4-213ENST00000524895 COX6B2Q6YFQ2 88 aa8.03□□□□□ -1.12
TSPAN4-213ENST00000524895 CCDC179H3BU77 68 aa7.98□□□□□ -1.13
TSPAN4-213ENST00000524895 KRTAP19-2Q3LHN2 52 aa7.97□□□□□ -1.13
TSPAN4-213ENST00000524895 NDUFC1O43677 76 aa7.93□□□□□ -1.14
TSPAN4-213ENST00000524895 LCE2CQ5TA81 110 aa7.91□□□□□ -1.14
TSPAN4-213ENST00000524895 CYSTM1Q9H1C7 97 aa7.91□□□□□ -1.14
TSPAN4-213ENST00000524895 H1FX-AS1Q4G0G2 97 aa7.89□□□□□ -1.15
TSPAN4-213ENST00000524895 KRTAP3-1Q9BYR8 98 aa7.89□□□□□ -1.15
TSPAN4-213ENST00000524895 A8MUN3 132 aa7.88□□□□□ -1.15
TSPAN4-213ENST00000524895 H7BZZ5 65 aa7.87□□□□□ -1.15
TSPAN4-213ENST00000524895 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
TSPAN4-213ENST00000524895 DMAC1Q96GE9 116 aa7.85□□□□□ -1.15
TSPAN4-213ENST00000524895 FAT4Q6V0I7 4981 aa7.85□□□□□ -1.15
TSPAN4-213ENST00000524895 PCP4P48539 62 aa7.83□□□□□ -1.16
TSPAN4-213ENST00000524895 MT1HP80294 61 aa7.8□□□□□ -1.16
TSPAN4-213ENST00000524895 S4R3F8 94 aa7.79□□□□□ -1.16
TSPAN4-213ENST00000524895 FLGP20930 4061 aaPredicted RBP7.77□□□□□ -1.17
TSPAN4-213ENST00000524895 ACYP2P14621 99 aa7.77□□□□□ -1.17
TSPAN4-213ENST00000524895 M0R2T5 61 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms