RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.85	□□□□□ -1.63
SPIDR-223	ENST00000524033	PSCA	O43653	123 aa		4.85	□□□□□ -1.63
SPIDR-223	ENST00000524033	SPRR1B	P22528	89 aa		4.85	□□□□□ -1.63
SPIDR-223	ENST00000524033	UBE2B	P63146	152 aa		4.85	□□□□□ -1.63
SPIDR-223	ENST00000524033		A0A087WTM6	91 aa		4.84	□□□□□ -1.63
SPIDR-223	ENST00000524033		A0A0A0MQY5	61 aa		4.84	□□□□□ -1.63
SPIDR-223	ENST00000524033		Q1T7F1	81 aa		4.84	□□□□□ -1.63
SPIDR-223	ENST00000524033	CNBP	P62633	177 aa	Known RBP	4.83	□□□□□ -1.64
SPIDR-223	ENST00000524033	C1orf64	Q8NEQ6	169 aa		4.83	□□□□□ -1.64
SPIDR-223	ENST00000524033	MYCBP2	O75592	4640 aa		4.83	□□□□□ -1.64
SPIDR-223	ENST00000524033	FAT1	Q14517	4588 aa		4.83	□□□□□ -1.64
SPIDR-223	ENST00000524033		A0A096LNI7	61 aa		4.82	□□□□□ -1.64
SPIDR-223	ENST00000524033	MPLKIP	Q8TAP9	179 aa		4.82	□□□□□ -1.64
SPIDR-223	ENST00000524033	TRAV22	A0A0B4J277	110 aa		4.81	□□□□□ -1.64
SPIDR-223	ENST00000524033		H0Y9J4	135 aa		4.81	□□□□□ -1.64
SPIDR-223	ENST00000524033		H3BPC8	53 aa		4.81	□□□□□ -1.64
SPIDR-223	ENST00000524033	KRTAP10-1	P60331	282 aa		4.81	□□□□□ -1.64
SPIDR-223	ENST00000524033		A0A0G2JQZ4	141 aa		4.8	□□□□□ -1.64
SPIDR-223	ENST00000524033		A0A1W2PNN7	141 aa		4.8	□□□□□ -1.64
SPIDR-223	ENST00000524033		A0A087WSZ3	146 aa		4.79	□□□□□ -1.64
SPIDR-223	ENST00000524033	IGLV5-52	A0A0A0MRZ9	124 aa		4.79	□□□□□ -1.64
SPIDR-223	ENST00000524033	LRCOL1	A6NCL2	159 aa		4.79	□□□□□ -1.64
SPIDR-223	ENST00000524033	NDUFB1	O75438	58 aa		4.79	□□□□□ -1.64
SPIDR-223	ENST00000524033	PRLH	P81277	87 aa		4.79	□□□□□ -1.64
SPIDR-223	ENST00000524033	SPANXA2-OT1	Q8N9U9	137 aa		4.79	□□□□□ -1.64
SPIDR-223	ENST00000524033	BRK1	Q8WUW1	75 aa		4.79	□□□□□ -1.64
SPIDR-223	ENST00000524033	SMR3B	P02814	79 aa	Predicted RBP	4.78	□□□□□ -1.64
SPIDR-223	ENST00000524033	KRTAP11-1	Q8IUC1	163 aa		4.78	□□□□□ -1.64
SPIDR-223	ENST00000524033	LINC00472	Q9H8W2	130 aa		4.78	□□□□□ -1.64
SPIDR-223	ENST00000524033		Q5VSD8	79 aa		4.77	□□□□□ -1.65
SPIDR-223	ENST00000524033	WFDC13	Q8IUB5	93 aa		4.77	□□□□□ -1.65
SPIDR-223	ENST00000524033	PRR15	Q8IV56	129 aa		4.77	□□□□□ -1.65
SPIDR-223	ENST00000524033	KRTAP4-9	Q9BYQ8	210 aa		4.77	□□□□□ -1.65
SPIDR-223	ENST00000524033		A8MWP4	228 aa		4.76	□□□□□ -1.65
SPIDR-223	ENST00000524033	UBE2A	P49459	152 aa		4.76	□□□□□ -1.65
SPIDR-223	ENST00000524033	MP68	P56378	58 aa		4.76	□□□□□ -1.65
SPIDR-223	ENST00000524033	RPL37A	P61513	92 aa	Known RBP	4.76	□□□□□ -1.65
SPIDR-223	ENST00000524033	KRTAP13-1	Q8IUC0	172 aa		4.76	□□□□□ -1.65
SPIDR-223	ENST00000524033	C9orf163	Q8N9P6	203 aa		4.76	□□□□□ -1.65
SPIDR-223	ENST00000524033	MMP24-AS1	A0A0U1RRL7	71 aa		4.75	□□□□□ -1.65
SPIDR-223	ENST00000524033		H0Y9P7	68 aa		4.75	□□□□□ -1.65
SPIDR-223	ENST00000524033	ASB16-AS1	Q495Z4	193 aa		4.75	□□□□□ -1.65
SPIDR-223	ENST00000524033	CASC2	Q6XLA1	102 aa		4.75	□□□□□ -1.65
SPIDR-223	ENST00000524033	PKIG	Q9Y2B9	76 aa		4.75	□□□□□ -1.65
SPIDR-223	ENST00000524033	DNAH8	Q96JB1	4490 aa		4.75	□□□□□ -1.65
SPIDR-223	ENST00000524033	DEFB116	Q30KQ4	102 aa		4.74	□□□□□ -1.65
SPIDR-223	ENST00000524033	C1orf195	Q5TG92	126 aa		4.74	□□□□□ -1.65
SPIDR-223	ENST00000524033	PHF5A	Q7RTV0	110 aa	Known RBP	4.74	□□□□□ -1.65
SPIDR-223	ENST00000524033	C14orf177	Q52M58	125 aa		4.73	□□□□□ -1.65
SPIDR-223	ENST00000524033	LINC00208	Q96KT6	92 aa		4.73	□□□□□ -1.65
SPIDR-223	ENST00000524033		V9GYY9	64 aa		4.73	□□□□□ -1.65
SPIDR-223	ENST00000524033	IGKV2-24	A0A0C4DH68	120 aa		4.72	□□□□□ -1.65
SPIDR-223	ENST00000524033		Q5VV11	94 aa		4.72	□□□□□ -1.65
SPIDR-223	ENST00000524033		Q96NJ1	140 aa		4.72	□□□□□ -1.65
SPIDR-223	ENST00000524033	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.72	□□□□□ -1.65
SPIDR-223	ENST00000524033	CHTF8	P0CG12	524 aa		4.71	□□□□□ -1.66
SPIDR-223	ENST00000524033	PRR4	Q16378	134 aa		4.71	□□□□□ -1.66
SPIDR-223	ENST00000524033		Q6ZSA8	131 aa		4.7	□□□□□ -1.66
SPIDR-223	ENST00000524033		Q8N9P0	234 aa	Predicted RBP	4.7	□□□□□ -1.66
SPIDR-223	ENST00000524033		A8MUN3	132 aa		4.69	□□□□□ -1.66
SPIDR-223	ENST00000524033	LINC00483	Q53H64	154 aa		4.69	□□□□□ -1.66
SPIDR-223	ENST00000524033	IGLV7-46	A0A075B6I9	117 aa		4.68	□□□□□ -1.66
SPIDR-223	ENST00000524033	PSPHP1	O15172	72 aa		4.68	□□□□□ -1.66
SPIDR-223	ENST00000524033	MOBP	Q13875	183 aa		4.68	□□□□□ -1.66
SPIDR-223	ENST00000524033	LOC101927531	A0A1B0GV80	90 aa		4.67	□□□□□ -1.66
SPIDR-223	ENST00000524033	LIMD2	Q9BT23	127 aa		4.67	□□□□□ -1.66
SPIDR-223	ENST00000524033	KRTAP4-2	Q9BYR5	136 aa		4.67	□□□□□ -1.66
SPIDR-223	ENST00000524033	PLAC8	Q9NZF1	115 aa		4.67	□□□□□ -1.66
SPIDR-223	ENST00000524033	PANO1	I0J062	215 aa		4.66	□□□□□ -1.66
SPIDR-223	ENST00000524033	COA5	Q86WW8	74 aa		4.66	□□□□□ -1.66
SPIDR-223	ENST00000524033	KRTAP4-11	Q9BYQ6	195 aa		4.66	□□□□□ -1.66
SPIDR-223	ENST00000524033	C8orf17	Q9NRJ1	99 aa		4.66	□□□□□ -1.66
SPIDR-223	ENST00000524033	HMCN2	Q8NDA2	5059 aa		4.66	□□□□□ -1.66
SPIDR-223	ENST00000524033	IGKV2-30	P06310	120 aa		4.65	□□□□□ -1.67
SPIDR-223	ENST00000524033		Q75L30	129 aa		4.65	□□□□□ -1.67
SPIDR-223	ENST00000524033	CIRBP-AS1	Q8TBR5	109 aa		4.65	□□□□□ -1.67
SPIDR-223	ENST00000524033	SPACA4	Q8TDM5	124 aa		4.65	□□□□□ -1.67
SPIDR-223	ENST00000524033	TP53AIP1	Q9HCN2	124 aa		4.65	□□□□□ -1.67
SPIDR-223	ENST00000524033	LRP1	Q07954	4544 aa	Known RBP	4.65	□□□□□ -1.67
SPIDR-223	ENST00000524033	CD164	Q04900	197 aa		4.64	□□□□□ -1.67
SPIDR-223	ENST00000524033	UBR4	Q5T4S7	5183 aa		4.64	□□□□□ -1.67
SPIDR-223	ENST00000524033	FAT3	Q8TDW7	4589 aa		4.62	□□□□□ -1.67
SPIDR-223	ENST00000524033	FLG2	Q5D862	2391 aa	Predicted RBP	4.62	□□□□□ -1.67
SPIDR-223	ENST00000524033		A0A1B0GVX0	72 aa		4.62	□□□□□ -1.67
SPIDR-223	ENST00000524033		A8MU10	97 aa		4.62	□□□□□ -1.67
SPIDR-223	ENST00000524033	PRR26	Q8N8Z3	221 aa		4.62	□□□□□ -1.67
SPIDR-223	ENST00000524033	LINC01558	Q9Y6Z2	57 aa		4.62	□□□□□ -1.67
SPIDR-223	ENST00000524033	KRTAP10-4	P60372	401 aa	Predicted RBP	4.61	□□□□□ -1.67
SPIDR-223	ENST00000524033	PMAIP1	Q13794	54 aa		4.61	□□□□□ -1.67
SPIDR-223	ENST00000524033	KRTAP13-3	Q3SY46	172 aa		4.61	□□□□□ -1.67
SPIDR-223	ENST00000524033	PRR15L	Q9BU68	103 aa		4.61	□□□□□ -1.67
SPIDR-223	ENST00000524033	MRPL34	Q9BQ48	92 aa	Known RBP	4.6	□□□□□ -1.67
SPIDR-223	ENST00000524033	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.6	□□□□□ -1.67
SPIDR-223	ENST00000524033	PCOTH	Q58A44	107 aa		4.59	□□□□□ -1.67
SPIDR-223	ENST00000524033	PKHD1L1	Q86WI1	4243 aa		4.59	□□□□□ -1.68
SPIDR-223	ENST00000524033	IGLV9-49	A0A0B4J1Y8	123 aa		4.58	□□□□□ -1.68
SPIDR-223	ENST00000524033	CHKB-CPT1B	H3BT56	60 aa		4.58	□□□□□ -1.68
SPIDR-223	ENST00000524033	LCA10	Q71F78	164 aa		4.58	□□□□□ -1.68
SPIDR-223	ENST00000524033	HRES1	P13985	223 aa		4.57	□□□□□ -1.68
SPIDR-223	ENST00000524033		A0A087X002	238 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms