RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 VPS13BQ7Z7G8 4022 aa2.1□□□□□ -2.07
NPM1-211ENST00000523622 DCHS2Q6V1P9 2916 aa2.09□□□□□ -2.07
NPM1-211ENST00000523622 SPART-AS1P0CW21 52 aa2.09□□□□□ -2.07
NPM1-211ENST00000523622 DEFB124Q8NES8 71 aa2.09□□□□□ -2.07
NPM1-211ENST00000523622 PDZD2O15018 2839 aa2.09□□□□□ -2.07
NPM1-211ENST00000523622 DNAH8Q96JB1 4490 aa2.09□□□□□ -2.08
NPM1-211ENST00000523622 CEP350Q5VT06 3117 aa2.08□□□□□ -2.08
NPM1-211ENST00000523622 USP9YO00507 2555 aaPredicted RBP2.08□□□□□ -2.08
NPM1-211ENST00000523622 EPG5Q9HCE0 2579 aa2.08□□□□□ -2.08
NPM1-211ENST00000523622 CHD8Q9HCK8 2581 aa2.08□□□□□ -2.08
NPM1-211ENST00000523622 CFAP54Q96N23 3096 aa2.08□□□□□ -2.08
NPM1-211ENST00000523622 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
NPM1-211ENST00000523622 USP24Q9UPU5 2620 aa2.07□□□□□ -2.08
NPM1-211ENST00000523622 FRYLO94915 3013 aa2.07□□□□□ -2.08
NPM1-211ENST00000523622 PRUNE2Q8WUY3 3088 aa2.07□□□□□ -2.08
NPM1-211ENST00000523622 KMT2AQ03164 3969 aa2.07□□□□□ -2.08
NPM1-211ENST00000523622 TENM4Q6N022 2769 aa2.07□□□□□ -2.08
NPM1-211ENST00000523622 NBEAQ8NFP9 2946 aa2.06□□□□□ -2.08
NPM1-211ENST00000523622 PRKDCP78527 4128 aaKnown RBP2.06□□□□□ -2.08
NPM1-211ENST00000523622 ZNF469Q96JG9 3925 aaPredicted RBP2.06□□□□□ -2.08
NPM1-211ENST00000523622 ANK2Q01484 3957 aa2.06□□□□□ -2.08
NPM1-211ENST00000523622 RELNP78509 3460 aa2.06□□□□□ -2.08
NPM1-211ENST00000523622 C5orf42Q9H799 3197 aa2.06□□□□□ -2.08
NPM1-211ENST00000523622 LRRK2Q5S007 2527 aa2.06□□□□□ -2.08
NPM1-211ENST00000523622 A0A096LPF7 62 aa2.05□□□□□ -2.08
NPM1-211ENST00000523622 M0R2T5 61 aa2.05□□□□□ -2.08
NPM1-211ENST00000523622 ITPR1Q14643 2758 aa2.05□□□□□ -2.08
NPM1-211ENST00000523622 SPENQ96T58 3664 aaKnown RBP2.04□□□□□ -2.08
NPM1-211ENST00000523622 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
NPM1-211ENST00000523622 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
NPM1-211ENST00000523622 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
NPM1-211ENST00000523622 HIVEP3Q5T1R4 2406 aa2.03□□□□□ -2.08
NPM1-211ENST00000523622 COL12A1Q99715 3063 aa2.03□□□□□ -2.08
NPM1-211ENST00000523622 ITPR3Q14573 2671 aa2.02□□□□□ -2.09
NPM1-211ENST00000523622 DYNC2H1Q8NCM8 4307 aaKnown RBP2.02□□□□□ -2.09
NPM1-211ENST00000523622 NF1P21359 2839 aa2.01□□□□□ -2.09
NPM1-211ENST00000523622 HTTP42858 3142 aa2.01□□□□□ -2.09
NPM1-211ENST00000523622 FLNCQ14315 2725 aa2.01□□□□□ -2.09
NPM1-211ENST00000523622 SZT2Q5T011 3432 aa2.01□□□□□ -2.09
NPM1-211ENST00000523622 HELZ2Q9BYK8 2649 aaKnown RBP2□□□□□ -2.09
NPM1-211ENST00000523622 DNAH3Q8TD57 4116 aa2□□□□□ -2.09
NPM1-211ENST00000523622 FBN2P35556 2912 aa2□□□□□ -2.09
NPM1-211ENST00000523622 DNAH7Q8WXX0 4024 aa1.99□□□□□ -2.09
NPM1-211ENST00000523622 GCN1Q92616 2671 aaKnown RBP1.99□□□□□ -2.09
NPM1-211ENST00000523622 C9orf92A6NGG3 77 aa1.98□□□□□ -2.09
NPM1-211ENST00000523622 KRTAP5-9P26371 169 aa1.98□□□□□ -2.09
NPM1-211ENST00000523622 KRTAP21-3Q3LHN1 58 aa1.98□□□□□ -2.09
NPM1-211ENST00000523622 FAT2Q9NYQ8 4349 aa1.98□□□□□ -2.09
NPM1-211ENST00000523622 TRIOO75962 3097 aa1.98□□□□□ -2.09
NPM1-211ENST00000523622 ATMQ13315 3056 aa1.98□□□□□ -2.09
NPM1-211ENST00000523622 APCP25054 2843 aa1.98□□□□□ -2.09
NPM1-211ENST00000523622 NCOR2Q9Y618 2525 aa1.96□□□□□ -2.09
NPM1-211ENST00000523622 SETXQ7Z333 2677 aaKnown RBP1.96□□□□□ -2.1
NPM1-211ENST00000523622 SONP18583 2426 aaKnown RBP1.96□□□□□ -2.1
NPM1-211ENST00000523622 SPG11Q96JI7 2443 aa1.96□□□□□ -2.1
NPM1-211ENST00000523622 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
NPM1-211ENST00000523622 Q9Y3F1 56 aa1.95□□□□□ -2.1
NPM1-211ENST00000523622 COL7A1Q02388 2944 aa1.95□□□□□ -2.1
NPM1-211ENST00000523622 MAP1AP78559 2803 aaPredicted RBP1.95□□□□□ -2.1
NPM1-211ENST00000523622 LINC01556Q5JQF7 62 aa1.94□□□□□ -2.1
NPM1-211ENST00000523622 BOD1L1Q8NFC6 3051 aa1.94□□□□□ -2.1
NPM1-211ENST00000523622 MKI67P46013 3256 aaKnown RBP1.93□□□□□ -2.1
NPM1-211ENST00000523622 CACNA1AO00555 2505 aa1.93□□□□□ -2.1
NPM1-211ENST00000523622 PKHD1L1Q86WI1 4243 aa1.93□□□□□ -2.1
NPM1-211ENST00000523622 DNAH2Q9P225 4427 aa1.93□□□□□ -2.1
NPM1-211ENST00000523622 H3BNG1 76 aa1.93□□□□□ -2.1
NPM1-211ENST00000523622 SMR3AQ99954 134 aa1.93□□□□□ -2.1
NPM1-211ENST00000523622 LRBAP50851 2863 aa1.92□□□□□ -2.1
NPM1-211ENST00000523622 MTORP42345 2549 aa1.92□□□□□ -2.1
NPM1-211ENST00000523622 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
NPM1-211ENST00000523622 ZZEF1O43149 2961 aa1.92□□□□□ -2.1
NPM1-211ENST00000523622 ANK3Q12955 4377 aaKnown RBP1.91□□□□□ -2.1
NPM1-211ENST00000523622 UTP20O75691 2785 aaKnown RBP1.91□□□□□ -2.1
NPM1-211ENST00000523622 TNXBP22105 4242 aa1.91□□□□□ -2.1
NPM1-211ENST00000523622 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
NPM1-211ENST00000523622 DMXL1Q9Y485 3027 aa1.91□□□□□ -2.1
NPM1-211ENST00000523622 DNAH10Q8IVF4 4471 aa1.9□□□□□ -2.11
NPM1-211ENST00000523622 DMXL2Q8TDJ6 3036 aa1.9□□□□□ -2.11
NPM1-211ENST00000523622 DNAH12Q6ZR08 3092 aa1.89□□□□□ -2.11
NPM1-211ENST00000523622 NOTCH2Q04721 2471 aa1.89□□□□□ -2.11
NPM1-211ENST00000523622 DMDP11532 3685 aa1.88□□□□□ -2.11
NPM1-211ENST00000523622 NBEAL2Q6ZNJ1 2754 aa1.88□□□□□ -2.11
NPM1-211ENST00000523622 SPTBN5Q9NRC6 3674 aaKnown RBP1.87□□□□□ -2.11
NPM1-211ENST00000523622 ACANP16112 2415 aa1.87□□□□□ -2.11
NPM1-211ENST00000523622 STAB1Q9NY15 2570 aa1.87□□□□□ -2.11
NPM1-211ENST00000523622 CELSR3Q9NYQ7 3312 aa1.87□□□□□ -2.11
NPM1-211ENST00000523622 ANKHD1Q8IWZ3 2542 aaKnown RBP1.86□□□□□ -2.11
NPM1-211ENST00000523622 SMG1Q96Q15 3661 aaKnown RBP1.86□□□□□ -2.11
NPM1-211ENST00000523622 FLGP20930 4061 aaPredicted RBP1.86□□□□□ -2.11
NPM1-211ENST00000523622 LAMA5O15230 3695 aa1.85□□□□□ -2.11
NPM1-211ENST00000523622 TACC2O95359 2948 aa1.84□□□□□ -2.11
NPM1-211ENST00000523622 ZANQ9Y493 2812 aa1.84□□□□□ -2.11
NPM1-211ENST00000523622 FRAS1Q86XX4 4008 aa1.84□□□□□ -2.11
NPM1-211ENST00000523622 KRTAP9-6A8MVA2 160 aa1.84□□□□□ -2.11
NPM1-211ENST00000523622 CFAP46Q8IYW2 2715 aa1.83□□□□□ -2.12
NPM1-211ENST00000523622 DEFB133Q30KQ1 61 aa1.83□□□□□ -2.12
NPM1-211ENST00000523622 KRTAP8-1Q8IUC2 63 aa1.83□□□□□ -2.12
NPM1-211ENST00000523622 CFAP47Q6ZTR5 3102 aa1.83□□□□□ -2.12
NPM1-211ENST00000523622 CD52P31358 61 aa1.82□□□□□ -2.12
NPM1-211ENST00000523622 CSMD1Q96PZ7 3565 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms