RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 J3QR89 54 aa6.55□□□□□ -1.36
PVT1-215ENST00000522963 BPY2O14599 106 aa6.55□□□□□ -1.36
PVT1-215ENST00000522963 DSCR10P59022 87 aa6.55□□□□□ -1.36
PVT1-215ENST00000522963 IGKV3D-7A0A0C4DH55 119 aa6.53□□□□□ -1.36
PVT1-215ENST00000522963 A8MWP4 228 aa6.53□□□□□ -1.36
PVT1-215ENST00000522963 IGHV6-1A0A0B4J1U7 121 aa6.52□□□□□ -1.37
PVT1-215ENST00000522963 A0A1B0GVX0 72 aa6.52□□□□□ -1.37
PVT1-215ENST00000522963 NDUFB1O75438 58 aa6.51□□□□□ -1.37
PVT1-215ENST00000522963 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
PVT1-215ENST00000522963 K7EQZ3 153 aa6.5□□□□□ -1.37
PVT1-215ENST00000522963 PRR15Q8IV56 129 aa6.5□□□□□ -1.37
PVT1-215ENST00000522963 K7ERU9 68 aa6.49□□□□□ -1.37
PVT1-215ENST00000522963 LINC00313P59037 77 aa6.49□□□□□ -1.37
PVT1-215ENST00000522963 XP32Q5T750 250 aa6.49□□□□□ -1.37
PVT1-215ENST00000522963 Q8N9L7 120 aa6.49□□□□□ -1.37
PVT1-215ENST00000522963 C8orf87E5RJ46 101 aa6.48□□□□□ -1.37
PVT1-215ENST00000522963 CXCL6P80162 114 aa6.48□□□□□ -1.37
PVT1-215ENST00000522963 C8orf17Q9NRJ1 99 aa6.47□□□□□ -1.37
PVT1-215ENST00000522963 LINC00643Q86TS7 51 aa6.46□□□□□ -1.38
PVT1-215ENST00000522963 KRTAP16-1A8MUX0 517 aa6.45□□□□□ -1.38
PVT1-215ENST00000522963 SEC61BP60468 96 aaKnown RBP6.45□□□□□ -1.38
PVT1-215ENST00000522963 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
PVT1-215ENST00000522963 MMP24-AS1A0A0U1RRL7 71 aa6.44□□□□□ -1.38
PVT1-215ENST00000522963 C20orf166-AS1Q96NR2 134 aa6.41□□□□□ -1.38
PVT1-215ENST00000522963 A0A0U1RQV1 116 aa6.4□□□□□ -1.38
PVT1-215ENST00000522963 A8MUU9 505 aa6.4□□□□□ -1.38
PVT1-215ENST00000522963 RPL37P61927 97 aaKnown RBP6.4□□□□□ -1.38
PVT1-215ENST00000522963 Q75L30 129 aa6.4□□□□□ -1.38
PVT1-215ENST00000522963 MUC17Q685J3 4493 aa6.4□□□□□ -1.39
PVT1-215ENST00000522963 hDV103S1A0JD37 113 aa6.39□□□□□ -1.39
PVT1-215ENST00000522963 WFDC13Q8IUB5 93 aa6.39□□□□□ -1.39
PVT1-215ENST00000522963 TMEM254Q8TBM7 123 aa6.39□□□□□ -1.39
PVT1-215ENST00000522963 PCOTHQ58A44 107 aa6.38□□□□□ -1.39
PVT1-215ENST00000522963 HCG22E2RYF7 251 aa6.37□□□□□ -1.39
PVT1-215ENST00000522963 HIST1H4AP62805 103 aaKnown RBP6.37□□□□□ -1.39
PVT1-215ENST00000522963 CASC2Q6XLA1 102 aa6.37□□□□□ -1.39
PVT1-215ENST00000522963 Q8N9P0 234 aaPredicted RBP6.37□□□□□ -1.39
PVT1-215ENST00000522963 MRPL34Q9BQ48 92 aaKnown RBP6.37□□□□□ -1.39
PVT1-215ENST00000522963 KRTAP4-1Q9BYQ7 146 aa6.36□□□□□ -1.39
PVT1-215ENST00000522963 MT-ATP8P03928 68 aa6.35□□□□□ -1.39
PVT1-215ENST00000522963 A0A087WVE0 104 aa6.34□□□□□ -1.39
PVT1-215ENST00000522963 MUC2Q02817 5179 aa6.33□□□□□ -1.4
PVT1-215ENST00000522963 ATP11AUNQ6ZP68 121 aa6.31□□□□□ -1.4
PVT1-215ENST00000522963 NDUFS5O43920 106 aa6.3□□□□□ -1.4
PVT1-215ENST00000522963 ZCCHC13Q8WW36 166 aaKnown RBP6.28□□□□□ -1.4
PVT1-215ENST00000522963 IMUPQ9GZP8 106 aa6.28□□□□□ -1.4
PVT1-215ENST00000522963 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
PVT1-215ENST00000522963 Q5W150 140 aa6.23□□□□□ -1.41
PVT1-215ENST00000522963 FAT4Q6V0I7 4981 aa6.22□□□□□ -1.41
PVT1-215ENST00000522963 TP53AIP1Q9HCN2 124 aa6.21□□□□□ -1.42
PVT1-215ENST00000522963 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
PVT1-215ENST00000522963 FAM236AA0A1B0GUQ0 79 aa6.18□□□□□ -1.42
PVT1-215ENST00000522963 FAM236BA0A1B0GV22 79 aa6.18□□□□□ -1.42
PVT1-215ENST00000522963 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
PVT1-215ENST00000522963 SCGB1A1P11684 91 aa6.17□□□□□ -1.42
PVT1-215ENST00000522963 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
PVT1-215ENST00000522963 UQCRQO14949 82 aa6.16□□□□□ -1.42
PVT1-215ENST00000522963 SPINK7P58062 85 aa6.15□□□□□ -1.42
PVT1-215ENST00000522963 COX6B2Q6YFQ2 88 aa6.15□□□□□ -1.42
PVT1-215ENST00000522963 TRAV22A0A0B4J277 110 aa6.13□□□□□ -1.43
PVT1-215ENST00000522963 KRTAP19-2Q3LHN2 52 aa6.13□□□□□ -1.43
PVT1-215ENST00000522963 IGKV2D-30A0A075B6S6 120 aa6.12□□□□□ -1.43
PVT1-215ENST00000522963 IGKV2-30P06310 120 aa6.12□□□□□ -1.43
PVT1-215ENST00000522963 LCE2CQ5TA81 110 aa6.12□□□□□ -1.43
PVT1-215ENST00000522963 H0Y9P7 68 aa6.11□□□□□ -1.43
PVT1-215ENST00000522963 HRES1P13985 223 aa6.11□□□□□ -1.43
PVT1-215ENST00000522963 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
PVT1-215ENST00000522963 ATOX1O00244 68 aa6.08□□□□□ -1.44
PVT1-215ENST00000522963 SMIM20Q8N5G0 67 aa6.08□□□□□ -1.44
PVT1-215ENST00000522963 TRAV7A0A075B6U4 112 aa6.07□□□□□ -1.44
PVT1-215ENST00000522963 MT1HP80294 61 aa6.06□□□□□ -1.44
PVT1-215ENST00000522963 C5orf47Q569G3 176 aa6.06□□□□□ -1.44
PVT1-215ENST00000522963 MPLKIPQ8TAP9 179 aa6.06□□□□□ -1.44
PVT1-215ENST00000522963 LOC101927531A0A1B0GV80 90 aa6.05□□□□□ -1.44
PVT1-215ENST00000522963 M0R2T5 61 aa6.05□□□□□ -1.44
PVT1-215ENST00000522963 MP68P56378 58 aa6.05□□□□□ -1.44
PVT1-215ENST00000522963 CYP4F30PQ9H0H9 118 aa6.05□□□□□ -1.44
PVT1-215ENST00000522963 C1orf64Q8NEQ6 169 aa6.04□□□□□ -1.44
PVT1-215ENST00000522963 LINC00208Q96KT6 92 aa6.04□□□□□ -1.44
PVT1-215ENST00000522963 FAM236DA0A1B0GTK5 79 aa6.01□□□□□ -1.45
PVT1-215ENST00000522963 H3BPC8 53 aa6.01□□□□□ -1.45
PVT1-215ENST00000522963 FAM236CP0DP71 79 aa6.01□□□□□ -1.45
PVT1-215ENST00000522963 RBM12B-AS1Q9P1G2 102 aa6.01□□□□□ -1.45
PVT1-215ENST00000522963 SERP2Q8N6R1 65 aa6□□□□□ -1.45
PVT1-215ENST00000522963 C4orf26Q17RF5 130 aa5.98□□□□□ -1.45
PVT1-215ENST00000522963 KLKP1Q107X0 134 aa5.97□□□□□ -1.45
PVT1-215ENST00000522963 COX7CP15954 63 aa5.93□□□□□ -1.46
PVT1-215ENST00000522963 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
PVT1-215ENST00000522963 C20orf197Q8N268 126 aa5.93□□□□□ -1.46
PVT1-215ENST00000522963 SNURFQ9Y675 71 aa5.93□□□□□ -1.46
PVT1-215ENST00000522963 FLGP20930 4061 aaPredicted RBP5.92□□□□□ -1.46
PVT1-215ENST00000522963 ANAPC13Q9BS18 74 aa5.92□□□□□ -1.46
PVT1-215ENST00000522963 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
PVT1-215ENST00000522963 LORP23490 312 aaPredicted RBP5.89□□□□□ -1.47
PVT1-215ENST00000522963 FSIP2Q5CZC0 6907 aa5.89□□□□□ -1.47
PVT1-215ENST00000522963 H1FX-AS1Q4G0G2 97 aa5.88□□□□□ -1.47
PVT1-215ENST00000522963 CCDC179H3BU77 68 aa5.82□□□□□ -1.48
PVT1-215ENST00000522963 LCE2DQ5TA82 110 aaPredicted RBP5.81□□□□□ -1.48
PVT1-215ENST00000522963 CYSTM1Q9H1C7 97 aa5.81□□□□□ -1.48
PVT1-215ENST00000522963 CRCT1Q9UGL9 99 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms