RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 CFAP46Q8IYW2 2715 aa2.7□□□□□ -1.98
NPM1-207ENST00000521260 MAST4O15021 2626 aa2.69□□□□□ -1.98
NPM1-207ENST00000521260 FLNBO75369 2602 aaKnown RBP2.69□□□□□ -1.98
NPM1-207ENST00000521260 SETXQ7Z333 2677 aaKnown RBP2.69□□□□□ -1.98
NPM1-207ENST00000521260 TENM4Q6N022 2769 aa2.69□□□□□ -1.98
NPM1-207ENST00000521260 TLN1Q9Y490 2541 aaKnown RBP2.68□□□□□ -1.98
NPM1-207ENST00000521260 A0A0D9SG42 100 aa2.68□□□□□ -1.98
NPM1-207ENST00000521260 RPS29P62273 56 aaKnown RBP2.68□□□□□ -1.98
NPM1-207ENST00000521260 RP1L1Q8IWN7 2480 aaPredicted RBP2.68□□□□□ -1.98
NPM1-207ENST00000521260 M0QZ58 72 aa2.67□□□□□ -1.98
NPM1-207ENST00000521260 R4GN34 69 aa2.67□□□□□ -1.98
NPM1-207ENST00000521260 TENM2Q9NT68 2774 aa2.67□□□□□ -1.98
NPM1-207ENST00000521260 NAV2Q8IVL1 2488 aa2.67□□□□□ -1.98
NPM1-207ENST00000521260 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.67□□□□□ -1.982e-8■■■■□ 19.9
NPM1-207ENST00000521260 PIEZO2Q9H5I5 2752 aa2.66□□□□□ -1.98
NPM1-207ENST00000521260 LCE1AQ5T7P2 110 aa2.66□□□□□ -1.98
NPM1-207ENST00000521260 MAPK1IP1LQ8NDC0 245 aa2.66□□□□□ -1.98
NPM1-207ENST00000521260 DOPEY1Q5JWR5 2465 aa2.66□□□□□ -1.98
NPM1-207ENST00000521260 HECTD1Q9ULT8 2610 aa2.66□□□□□ -1.98
NPM1-207ENST00000521260 ABCA2Q9BZC7 2435 aa2.66□□□□□ -1.98
NPM1-207ENST00000521260 ANKHD1Q8IWZ3 2542 aaKnown RBP2.65□□□□□ -1.99
NPM1-207ENST00000521260 LRRK2Q5S007 2527 aa2.65□□□□□ -1.99
NPM1-207ENST00000521260 USP9YO00507 2555 aaPredicted RBP2.64□□□□□ -1.99
NPM1-207ENST00000521260 HIVEP3Q5T1R4 2406 aa2.64□□□□□ -1.99
NPM1-207ENST00000521260 UNC79Q9P2D8 2635 aa2.64□□□□□ -1.99
NPM1-207ENST00000521260 BOD1L1Q8NFC6 3051 aa2.64□□□□□ -1.99
NPM1-207ENST00000521260 KRTAP10-11P60412 298 aa2.63□□□□□ -1.99
NPM1-207ENST00000521260 USP9XQ93008 2570 aaPredicted RBP2.63□□□□□ -1.99
NPM1-207ENST00000521260 CSMD1Q96PZ7 3565 aa2.63□□□□□ -1.99
NPM1-207ENST00000521260 SPTAN1Q13813 2472 aaKnown RBP2.63□□□□□ -1.99
NPM1-207ENST00000521260 MYO9AB2RTY4 2548 aa2.63□□□□□ -1.99
NPM1-207ENST00000521260 KRTAP10-6P60371 365 aaPredicted RBP2.62□□□□□ -1.99
NPM1-207ENST00000521260 KRTAP1-1Q07627 177 aa2.62□□□□□ -1.99
NPM1-207ENST00000521260 KRTAP12-2P59991 146 aa2.61□□□□□ -1.99
NPM1-207ENST00000521260 ABCA12Q86UK0 2595 aa2.61□□□□□ -1.99
NPM1-207ENST00000521260 CSMD2Q7Z408 3487 aa2.61□□□□□ -1.99
NPM1-207ENST00000521260 COL12A1Q99715 3063 aa2.6□□□□□ -1.99
NPM1-207ENST00000521260 C2CD3Q4AC94 2353 aa2.6□□□□□ -1.99
NPM1-207ENST00000521260 FLNCQ14315 2725 aa2.6□□□□□ -1.99
NPM1-207ENST00000521260 KRTAP12-1P59990 96 aa2.6□□□□□ -1.99
NPM1-207ENST00000521260 NBASA2RRP1 2371 aa2.6□□□□□ -1.99
NPM1-207ENST00000521260 CREBBPQ92793 2442 aa2.59□□□□□ -1.99
NPM1-207ENST00000521260 MAP1AP78559 2803 aaPredicted RBP2.59□□□□□ -2
NPM1-207ENST00000521260 TEX15Q9BXT5 2789 aa2.58□□□□□ -2
NPM1-207ENST00000521260 ANKRD17O75179 2603 aaKnown RBP2.57□□□□□ -2
NPM1-207ENST00000521260 CELSR2Q9HCU4 2923 aa2.57□□□□□ -2
NPM1-207ENST00000521260 F8P00451 2351 aa2.57□□□□□ -2
NPM1-207ENST00000521260 NOTCH2Q04721 2471 aa2.57□□□□□ -2
NPM1-207ENST00000521260 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
NPM1-207ENST00000521260 OTOGQ6ZRI0 2925 aa2.55□□□□□ -2
NPM1-207ENST00000521260 KRTAP10-3P60369 221 aa2.55□□□□□ -2
NPM1-207ENST00000521260 KRTAP10-9P60411 292 aa2.55□□□□□ -2
NPM1-207ENST00000521260 ZNF469Q96JG9 3925 aaPredicted RBP2.55□□□□□ -2
NPM1-207ENST00000521260 FBN2P35556 2912 aa2.55□□□□□ -2
NPM1-207ENST00000521260 PDZD2O15018 2839 aa2.55□□□□□ -2
NPM1-207ENST00000521260 ITPR2Q14571 2701 aa2.55□□□□□ -2
NPM1-207ENST00000521260 SPG11Q96JI7 2443 aa2.54□□□□□ -2
NPM1-207ENST00000521260 APCP25054 2843 aa2.54□□□□□ -2
NPM1-207ENST00000521260 TEP1Q99973 2627 aaKnown RBP2.54□□□□□ -2
NPM1-207ENST00000521260 FLG2Q5D862 2391 aaPredicted RBP2.53□□□□□ -2
NPM1-207ENST00000521260 CSPG4Q6UVK1 2322 aa2.53□□□□□ -2
NPM1-207ENST00000521260 AKAP9Q99996 3911 aa2.52□□□□□ -2.01
NPM1-207ENST00000521260 KRTAP1-5Q9BYS1 174 aa2.52□□□□□ -2.01
NPM1-207ENST00000521260 TACC2O95359 2948 aa2.52□□□□□ -2.01
NPM1-207ENST00000521260 ADGRG4Q8IZF6 3080 aa2.51□□□□□ -2.01
NPM1-207ENST00000521260 CRYBG3Q68DQ2 2970 aa2.51□□□□□ -2.01
NPM1-207ENST00000521260 PRRC2CQ9Y520 2896 aaKnown RBP2.51□□□□□ -2.01
NPM1-207ENST00000521260 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
NPM1-207ENST00000521260 KRTAP13-2Q52LG2 175 aa2.51□□□□□ -2.01
NPM1-207ENST00000521260 HIVEP1P15822 2718 aa2.51□□□□□ -2.01
NPM1-207ENST00000521260 LRBAP50851 2863 aa2.51□□□□□ -2.01
NPM1-207ENST00000521260 UTP20O75691 2785 aaKnown RBP2.5□□□□□ -2.01
NPM1-207ENST00000521260 CCDC168Q8NDH2 2452 aa2.5□□□□□ -2.01
NPM1-207ENST00000521260 Q5VSD8 79 aa2.5□□□□□ -2.01
NPM1-207ENST00000521260 HIVEP2P31629 2446 aa2.49□□□□□ -2.01
NPM1-207ENST00000521260 CENPEQ02224 2701 aa2.48□□□□□ -2.01
NPM1-207ENST00000521260 CELSR1Q9NYQ6 3014 aa2.48□□□□□ -2.01
NPM1-207ENST00000521260 MT3P25713 68 aa2.48□□□□□ -2.01
NPM1-207ENST00000521260 KRTAP10-8P60410 259 aa2.48□□□□□ -2.01
NPM1-207ENST00000521260 SMR3AQ99954 134 aa2.48□□□□□ -2.01
NPM1-207ENST00000521260 NSD1Q96L73 2696 aaPredicted RBP2.47□□□□□ -2.01
NPM1-207ENST00000521260 VPS13CQ709C8 3753 aa2.47□□□□□ -2.01
NPM1-207ENST00000521260 POLQO75417 2590 aa2.47□□□□□ -2.01
NPM1-207ENST00000521260 NF1P21359 2839 aa2.46□□□□□ -2.01
NPM1-207ENST00000521260 ITPR3Q14573 2671 aa2.46□□□□□ -2.01
NPM1-207ENST00000521260 FN1P02751 2386 aaKnown RBP2.46□□□□□ -2.01
NPM1-207ENST00000521260 FLNAP21333 2647 aaKnown RBP2.46□□□□□ -2.02
NPM1-207ENST00000521260 FBN3Q75N90 2809 aa2.46□□□□□ -2.02
NPM1-207ENST00000521260 DNHD1Q96M86 4753 aa2.46□□□□□ -2.02
NPM1-207ENST00000521260 DCHS2Q6V1P9 2916 aa2.45□□□□□ -2.02
NPM1-207ENST00000521260 MTORP42345 2549 aa2.45□□□□□ -2.02
NPM1-207ENST00000521260 SETD2Q9BYW2 2564 aaPredicted RBP2.44□□□□□ -2.02
NPM1-207ENST00000521260 HRNRQ86YZ3 2850 aaPredicted RBP2.44□□□□□ -2.02
NPM1-207ENST00000521260 CUBNO60494 3623 aa2.44□□□□□ -2.02
NPM1-207ENST00000521260 ACANP16112 2415 aa2.43□□□□□ -2.02
NPM1-207ENST00000521260 C9orf92A6NGG3 77 aa2.41□□□□□ -2.02
NPM1-207ENST00000521260 KRTAP1-4P0C5Y4 121 aa2.41□□□□□ -2.02
NPM1-207ENST00000521260 TNP1P09430 55 aa2.4□□□□□ -2.03
NPM1-207ENST00000521260 ANK2Q01484 3957 aa2.4□□□□□ -2.03
NPM1-207ENST00000521260 SONP18583 2426 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms