RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 C21orf62-AS1Q17RA5 79 aa8.69□□□□□ -1.02
SQLE-205ENST00000521232 ATXN8Q156A1 80 aa8.68□□□□□ -1.02
SQLE-205ENST00000521232 A0A1B0GVX0 72 aa8.67□□□□□ -1.02
SQLE-205ENST00000521232 C8orf87E5RJ46 101 aa8.66□□□□□ -1.02
SQLE-205ENST00000521232 Q6ZQT0 140 aa8.66□□□□□ -1.02
SQLE-205ENST00000521232 NAA38Q9BRA0 125 aaKnown RBP8.66□□□□□ -1.02
SQLE-205ENST00000521232 JMJD7-PLA2G4BH0Y9G9 81 aa8.64□□□□□ -1.03
SQLE-205ENST00000521232 J3KT08 172 aa8.64□□□□□ -1.03
SQLE-205ENST00000521232 SMIM6P0DI80 62 aa8.64□□□□□ -1.03
SQLE-205ENST00000521232 A0A1B0GW54 56 aa8.61□□□□□ -1.03
SQLE-205ENST00000521232 LOC110117498A0A087WWA1 95 aa8.6□□□□□ -1.03
SQLE-205ENST00000521232 PDE6GP18545 87 aa8.59□□□□□ -1.03
SQLE-205ENST00000521232 MPLKIPQ8TAP9 179 aa8.59□□□□□ -1.03
SQLE-205ENST00000521232 HRES1P13985 223 aa8.58□□□□□ -1.04
SQLE-205ENST00000521232 NDUFB1O75438 58 aa8.56□□□□□ -1.04
SQLE-205ENST00000521232 LYRM7Q5U5X0 104 aa8.56□□□□□ -1.04
SQLE-205ENST00000521232 TSTD3H0UI37 97 aa8.55□□□□□ -1.04
SQLE-205ENST00000521232 KRTAP9-8Q9BYQ0 159 aa8.55□□□□□ -1.04
SQLE-205ENST00000521232 RBM12B-AS1Q9P1G2 102 aa8.55□□□□□ -1.04
SQLE-205ENST00000521232 FAM236DA0A1B0GTK5 79 aa8.54□□□□□ -1.04
SQLE-205ENST00000521232 FAM236CP0DP71 79 aa8.54□□□□□ -1.04
SQLE-205ENST00000521232 A8MWP4 228 aa8.53□□□□□ -1.04
SQLE-205ENST00000521232 Q8N9P0 234 aaPredicted RBP8.53□□□□□ -1.04
SQLE-205ENST00000521232 ZCCHC13Q8WW36 166 aaKnown RBP8.53□□□□□ -1.04
SQLE-205ENST00000521232 C14orf132Q9NPU4 83 aa8.53□□□□□ -1.04
SQLE-205ENST00000521232 BATFQ16520 125 aa8.5□□□□□ -1.05
SQLE-205ENST00000521232 C8orf17Q9NRJ1 99 aa8.5□□□□□ -1.05
SQLE-205ENST00000521232 IGKV3D-7A0A0C4DH55 119 aa8.49□□□□□ -1.05
SQLE-205ENST00000521232 C9orf118A6NHY6 69 aa8.47□□□□□ -1.05
SQLE-205ENST00000521232 SPINK7P58062 85 aa8.47□□□□□ -1.05
SQLE-205ENST00000521232 NREPQ16612 68 aa8.47□□□□□ -1.05
SQLE-205ENST00000521232 LOC105371267A0A1B0GV96 52 aa8.45□□□□□ -1.06
SQLE-205ENST00000521232 PRR15Q8IV56 129 aa8.45□□□□□ -1.06
SQLE-205ENST00000521232 TAX1BP3O14907 124 aa8.44□□□□□ -1.06
SQLE-205ENST00000521232 H3BT86 120 aa8.43□□□□□ -1.06
SQLE-205ENST00000521232 Q6ZVQ6 151 aa8.43□□□□□ -1.06
SQLE-205ENST00000521232 MTURNQ8N3F0 131 aa8.43□□□□□ -1.06
SQLE-205ENST00000521232 A0A1W2PPM0 123 aa8.42□□□□□ -1.06
SQLE-205ENST00000521232 USH2AO75445 5202 aa8.4□□□□□ -1.06
SQLE-205ENST00000521232 MT2AP02795 61 aa8.4□□□□□ -1.06
SQLE-205ENST00000521232 MMP24-AS1A0A0U1RRL7 71 aa8.37□□□□□ -1.07
SQLE-205ENST00000521232 TMEM254Q8TBM7 123 aa8.37□□□□□ -1.07
SQLE-205ENST00000521232 MRPL34Q9BQ48 92 aaKnown RBP8.36□□□□□ -1.07
SQLE-205ENST00000521232 SSPOA2VEC9 5147 aa8.35□□□□□ -1.07
SQLE-205ENST00000521232 K7EQZ3 153 aa8.34□□□□□ -1.07
SQLE-205ENST00000521232 MT1FP04733 61 aa8.34□□□□□ -1.07
SQLE-205ENST00000521232 hDV103S1A0JD37 113 aa8.32□□□□□ -1.08
SQLE-205ENST00000521232 WFDC13Q8IUB5 93 aa8.32□□□□□ -1.08
SQLE-205ENST00000521232 BPY2O14599 106 aa8.3□□□□□ -1.08
SQLE-205ENST00000521232 KRTAP10-10P60014 251 aa8.29□□□□□ -1.08
SQLE-205ENST00000521232 SPCS1Q9Y6A9 102 aa8.29□□□□□ -1.08
SQLE-205ENST00000521232 KRTAP9-3Q9BYQ3 159 aa8.28□□□□□ -1.08
SQLE-205ENST00000521232 NDUFS5O43920 106 aa8.26□□□□□ -1.09
SQLE-205ENST00000521232 COL5A1-AS1Q5SY13 56 aa8.21□□□□□ -1.1
SQLE-205ENST00000521232 Q5W150 140 aa8.2□□□□□ -1.1
SQLE-205ENST00000521232 Q8N9L7 120 aa8.2□□□□□ -1.1
SQLE-205ENST00000521232 PRO0461Q9UI25 63 aa8.19□□□□□ -1.1
SQLE-205ENST00000521232 H1FX-AS1Q4G0G2 97 aa8.18□□□□□ -1.1
SQLE-205ENST00000521232 CASC2Q6XLA1 102 aa8.18□□□□□ -1.1
SQLE-205ENST00000521232 IGKV2D-30A0A075B6S6 120 aa8.15□□□□□ -1.1
SQLE-205ENST00000521232 K7EP34 96 aa8.15□□□□□ -1.1
SQLE-205ENST00000521232 IGKV2-30P06310 120 aa8.15□□□□□ -1.1
SQLE-205ENST00000521232 C7orf65Q6ZTY9 151 aa8.15□□□□□ -1.1
SQLE-205ENST00000521232 LINC00846Q9NV44 126 aa8.15□□□□□ -1.1
SQLE-205ENST00000521232 HCG22E2RYF7 251 aa8.14□□□□□ -1.11
SQLE-205ENST00000521232 FCGBPQ9Y6R7 5405 aaPredicted RBP8.13□□□□□ -1.11
SQLE-205ENST00000521232 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.13□□□□□ -1.11
SQLE-205ENST00000521232 UBL5Q9BZL1 73 aa8.13□□□□□ -1.11
SQLE-205ENST00000521232 KRTAP9-7A8MTY7 169 aa8.11□□□□□ -1.11
SQLE-205ENST00000521232 CXCL6P80162 114 aa8.11□□□□□ -1.11
SQLE-205ENST00000521232 KRTAP19-1Q8IUB9 90 aa8.1□□□□□ -1.11
SQLE-205ENST00000521232 GTF2H5Q6ZYL4 71 aa8.04□□□□□ -1.12
SQLE-205ENST00000521232 C4orf26Q17RF5 130 aa8.03□□□□□ -1.12
SQLE-205ENST00000521232 F8W1H4 67 aa8.02□□□□□ -1.13
SQLE-205ENST00000521232 PCP4L1A6NKN8 68 aa7.98□□□□□ -1.13
SQLE-205ENST00000521232 ETDBQ3ZM63 59 aa7.98□□□□□ -1.13
SQLE-205ENST00000521232 KRTAP19-6Q3LI70 58 aa7.96□□□□□ -1.14
SQLE-205ENST00000521232 TP53AIP1Q9HCN2 124 aa7.96□□□□□ -1.14
SQLE-205ENST00000521232 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
SQLE-205ENST00000521232 MACF1Q9UPN3 7388 aaKnown RBP7.9□□□□□ -1.15
SQLE-205ENST00000521232 C1orf64Q8NEQ6 169 aa7.89□□□□□ -1.15
SQLE-205ENST00000521232 C5orf47Q569G3 176 aa7.87□□□□□ -1.15
SQLE-205ENST00000521232 S4R3F8 94 aa7.85□□□□□ -1.15
SQLE-205ENST00000521232 SYNE2Q8WXH0 6885 aaKnown RBP7.84□□□□□ -1.15
SQLE-205ENST00000521232 CSAG1Q6PB30 78 aa7.83□□□□□ -1.16
SQLE-205ENST00000521232 ACYP1P07311 99 aa7.82□□□□□ -1.16
SQLE-205ENST00000521232 LCA10Q71F78 164 aa7.82□□□□□ -1.16
SQLE-205ENST00000521232 CYP4F30PQ9H0H9 118 aa7.8□□□□□ -1.16
SQLE-205ENST00000521232 FAM236AA0A1B0GUQ0 79 aa7.77□□□□□ -1.17
SQLE-205ENST00000521232 FAM236BA0A1B0GV22 79 aa7.77□□□□□ -1.17
SQLE-205ENST00000521232 FAM240AA0A1B0GVK7 77 aa7.77□□□□□ -1.17
SQLE-205ENST00000521232 TRAV22A0A0B4J277 110 aa7.75□□□□□ -1.17
SQLE-205ENST00000521232 LOC101927531A0A1B0GV80 90 aa7.73□□□□□ -1.17
SQLE-205ENST00000521232 ATP5EP2Q5VTU8 51 aa7.73□□□□□ -1.17
SQLE-205ENST00000521232 HIST1H4AP62805 103 aaKnown RBP7.69□□□□□ -1.18
SQLE-205ENST00000521232 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
SQLE-205ENST00000521232 UQCRQO14949 82 aa7.68□□□□□ -1.18
SQLE-205ENST00000521232 KRTAP19-8Q3LI54 63 aa7.66□□□□□ -1.18
SQLE-205ENST00000521232 A0A087WVE0 104 aa7.65□□□□□ -1.18
SQLE-205ENST00000521232 MT1BP07438 61 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms