RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 DMBT1Q9UGM3 2413 aaPredicted RBP6.63□□□□□ -1.35
CLK4-206ENST00000520878 LCE6AA0A183 80 aa6.62□□□□□ -1.35
CLK4-206ENST00000520878 LINC00336Q6ZUF6 198 aa6.62□□□□□ -1.35
CLK4-206ENST00000520878 IGKV2D-30A0A075B6S6 120 aa6.62□□□□□ -1.35
CLK4-206ENST00000520878 IGKV2-30P06310 120 aa6.62□□□□□ -1.35
CLK4-206ENST00000520878 ZCCHC13Q8WW36 166 aaKnown RBP6.61□□□□□ -1.35
CLK4-206ENST00000520878 FLG2Q5D862 2391 aaPredicted RBP6.61□□□□□ -1.35
CLK4-206ENST00000520878 CD164Q04900 197 aa6.61□□□□□ -1.35
CLK4-206ENST00000520878 Q6ZSA8 131 aa6.61□□□□□ -1.35
CLK4-206ENST00000520878 C1orf195Q5TG92 126 aa6.6□□□□□ -1.35
CLK4-206ENST00000520878 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
CLK4-206ENST00000520878 LINC00304Q8N9R0 145 aa6.6□□□□□ -1.35
CLK4-206ENST00000520878 DNAH2Q9P225 4427 aa6.59□□□□□ -1.35
CLK4-206ENST00000520878 Q5XG85 94 aa6.59□□□□□ -1.35
CLK4-206ENST00000520878 DYNC2H1Q8NCM8 4307 aaKnown RBP6.58□□□□□ -1.36
CLK4-206ENST00000520878 CHKB-CPT1BH3BT56 60 aa6.58□□□□□ -1.36
CLK4-206ENST00000520878 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
CLK4-206ENST00000520878 C9orf92A6NGG3 77 aa6.56□□□□□ -1.36
CLK4-206ENST00000520878 Q5W150 140 aa6.55□□□□□ -1.36
CLK4-206ENST00000520878 SPINK1P00995 79 aa6.54□□□□□ -1.36
CLK4-206ENST00000520878 DNAH17Q9UFH2 4485 aa6.54□□□□□ -1.36
CLK4-206ENST00000520878 COA5Q86WW8 74 aa6.54□□□□□ -1.36
CLK4-206ENST00000520878 Q8N9P0 234 aaPredicted RBP6.53□□□□□ -1.36
CLK4-206ENST00000520878 LOC101927531A0A1B0GV80 90 aa6.53□□□□□ -1.36
CLK4-206ENST00000520878 FAM229AH3BQW9 127 aa6.53□□□□□ -1.36
CLK4-206ENST00000520878 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
CLK4-206ENST00000520878 SPAG11AQ6PDA7 123 aa6.52□□□□□ -1.37
CLK4-206ENST00000520878 PRR15LQ9BU68 103 aa6.52□□□□□ -1.37
CLK4-206ENST00000520878 FRAS1Q86XX4 4008 aa6.52□□□□□ -1.37
CLK4-206ENST00000520878 HECTD4Q9Y4D8 3996 aa6.51□□□□□ -1.37
CLK4-206ENST00000520878 DNAH6Q9C0G6 4158 aa6.51□□□□□ -1.37
CLK4-206ENST00000520878 CYP4F30PQ9H0H9 118 aa6.51□□□□□ -1.37
CLK4-206ENST00000520878 A8MUN3 132 aa6.5□□□□□ -1.37
CLK4-206ENST00000520878 SPANXA2-OT1Q8N9U9 137 aa6.5□□□□□ -1.37
CLK4-206ENST00000520878 DNAH8Q96JB1 4490 aa6.49□□□□□ -1.37
CLK4-206ENST00000520878 IGLV7-46A0A075B6I9 117 aa6.48□□□□□ -1.37
CLK4-206ENST00000520878 LRP1BQ9NZR2 4599 aa6.48□□□□□ -1.37
CLK4-206ENST00000520878 HYDINQ4G0P3 5121 aa6.47□□□□□ -1.37
CLK4-206ENST00000520878 V9GYY9 64 aa6.47□□□□□ -1.37
CLK4-206ENST00000520878 HRES1P13985 223 aa6.44□□□□□ -1.38
CLK4-206ENST00000520878 A6NED7 52 aa6.44□□□□□ -1.38
CLK4-206ENST00000520878 ASB16-AS1Q495Z4 193 aa6.44□□□□□ -1.38
CLK4-206ENST00000520878 ACYP2P14621 99 aa6.43□□□□□ -1.38
CLK4-206ENST00000520878 C7orf65Q6ZTY9 151 aa6.43□□□□□ -1.38
CLK4-206ENST00000520878 SPTSSBQ8NFR3 76 aa6.42□□□□□ -1.38
CLK4-206ENST00000520878 DNAH5Q8TE73 4624 aa6.42□□□□□ -1.38
CLK4-206ENST00000520878 Q8N1X5 172 aa6.39□□□□□ -1.39
CLK4-206ENST00000520878 Q1T7F1 81 aa6.38□□□□□ -1.39
CLK4-206ENST00000520878 Q5VSD8 79 aa6.37□□□□□ -1.39
CLK4-206ENST00000520878 PRO0628Q9UI54 55 aa6.37□□□□□ -1.39
CLK4-206ENST00000520878 FAT1Q14517 4588 aa6.37□□□□□ -1.39
CLK4-206ENST00000520878 A0A1B0GVY2 172 aa6.36□□□□□ -1.39
CLK4-206ENST00000520878 ALMS1Q8TCU4 4167 aa6.34□□□□□ -1.4
CLK4-206ENST00000520878 SVIPQ8NHG7 77 aa6.33□□□□□ -1.4
CLK4-206ENST00000520878 VPS13BQ7Z7G8 4022 aa6.32□□□□□ -1.4
CLK4-206ENST00000520878 PKHD1P08F94 4074 aa6.32□□□□□ -1.4
CLK4-206ENST00000520878 DYNC1H1Q14204 4646 aaKnown RBP6.31□□□□□ -1.4
CLK4-206ENST00000520878 SACSQ9NZJ4 4579 aa6.3□□□□□ -1.4
CLK4-206ENST00000520878 KRTAP16-1A8MUX0 517 aa6.29□□□□□ -1.4
CLK4-206ENST00000520878 Q5VV11 94 aa6.29□□□□□ -1.4
CLK4-206ENST00000520878 A0A1B0GU69 56 aa6.28□□□□□ -1.4
CLK4-206ENST00000520878 FAT2Q9NYQ8 4349 aa6.27□□□□□ -1.41
CLK4-206ENST00000520878 ATP11AUNQ6ZP68 121 aa6.26□□□□□ -1.41
CLK4-206ENST00000520878 KRTAP13-3Q3SY46 172 aa6.26□□□□□ -1.41
CLK4-206ENST00000520878 SEC61GP60059 68 aa6.26□□□□□ -1.41
CLK4-206ENST00000520878 PMAIP1Q13794 54 aa6.26□□□□□ -1.41
CLK4-206ENST00000520878 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
CLK4-206ENST00000520878 A8MU10 97 aa6.24□□□□□ -1.41
CLK4-206ENST00000520878 SPINK7P58062 85 aa6.24□□□□□ -1.41
CLK4-206ENST00000520878 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
CLK4-206ENST00000520878 PKD1P98161 4303 aa6.22□□□□□ -1.41
CLK4-206ENST00000520878 LINC01558Q9Y6Z2 57 aa6.22□□□□□ -1.41
CLK4-206ENST00000520878 KMT2CQ8NEZ4 4911 aaKnown RBP6.21□□□□□ -1.42
CLK4-206ENST00000520878 KRTAP10-4P60372 401 aaPredicted RBP6.18□□□□□ -1.42
CLK4-206ENST00000520878 Q75L30 129 aa6.17□□□□□ -1.42
CLK4-206ENST00000520878 A8MUU9 505 aa6.13□□□□□ -1.43
CLK4-206ENST00000520878 C20orf166-AS1Q96NR2 134 aa6.12□□□□□ -1.43
CLK4-206ENST00000520878 APOBP04114 4563 aaKnown RBP6.12□□□□□ -1.43
CLK4-206ENST00000520878 LCA10Q71F78 164 aa6.12□□□□□ -1.43
CLK4-206ENST00000520878 RYR2Q92736 4967 aa6.11□□□□□ -1.43
CLK4-206ENST00000520878 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
CLK4-206ENST00000520878 UQCR11O14957 56 aa6.09□□□□□ -1.44
CLK4-206ENST00000520878 KRTAP10-8P60410 259 aa6.09□□□□□ -1.44
CLK4-206ENST00000520878 LRP1Q07954 4544 aaKnown RBP6.08□□□□□ -1.44
CLK4-206ENST00000520878 J3QL48 77 aa6.08□□□□□ -1.44
CLK4-206ENST00000520878 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
CLK4-206ENST00000520878 KIAA1109Q2LD37 5005 aa6.07□□□□□ -1.44
CLK4-206ENST00000520878 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
CLK4-206ENST00000520878 COX6B2Q6YFQ2 88 aa6.02□□□□□ -1.45
CLK4-206ENST00000520878 RYR3Q15413 4870 aa6.02□□□□□ -1.45
CLK4-206ENST00000520878 XP32Q5T750 250 aa6.01□□□□□ -1.45
CLK4-206ENST00000520878 RPL37P61927 97 aaKnown RBP6□□□□□ -1.45
CLK4-206ENST00000520878 KRTAP17-1Q9BYP8 105 aa5.96□□□□□ -1.46
CLK4-206ENST00000520878 A0A1B0GU33 70 aa5.95□□□□□ -1.46
CLK4-206ENST00000520878 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
CLK4-206ENST00000520878 RYR1P21817 5038 aa5.94□□□□□ -1.46
CLK4-206ENST00000520878 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
CLK4-206ENST00000520878 MT1HL1P0DM35 61 aa5.92□□□□□ -1.46
CLK4-206ENST00000520878 SPATA8Q6RVD6 105 aa5.9□□□□□ -1.46
CLK4-206ENST00000520878 S4R3F8 94 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms