RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 KRTAP2-1Q9BYU5 128 aa0.78□□□□□ -2.28
PABPC1-211ENST00000519596 PRKDCP78527 4128 aaKnown RBP0.78□□□□□ -2.28
PABPC1-211ENST00000519596 VWFP04275 2813 aa0.78□□□□□ -2.29
PABPC1-211ENST00000519596 VPS13BQ7Z7G8 4022 aa0.77□□□□□ -2.29
PABPC1-211ENST00000519596 DMBT1Q9UGM3 2413 aaPredicted RBP0.77□□□□□ -2.29
PABPC1-211ENST00000519596 TENM4Q6N022 2769 aa0.77□□□□□ -2.29
PABPC1-211ENST00000519596 CHD9Q3L8U1 2897 aa0.77□□□□□ -2.29
PABPC1-211ENST00000519596 A0A096LNI7 61 aa0.77□□□□□ -2.29
PABPC1-211ENST00000519596 DEFB136Q30KP8 78 aa0.77□□□□□ -2.29
PABPC1-211ENST00000519596 MACF1Q9UPN3 7388 aaKnown RBP0.77□□□□□ -2.29
PABPC1-211ENST00000519596 HECTD1Q9ULT8 2610 aa0.77□□□□□ -2.29
PABPC1-211ENST00000519596 OTOGQ6ZRI0 2925 aa0.77□□□□□ -2.29
PABPC1-211ENST00000519596 DNAH11Q96DT5 4516 aa0.76□□□□□ -2.29
PABPC1-211ENST00000519596 H3BNG1 76 aa0.76□□□□□ -2.29
PABPC1-211ENST00000519596 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
PABPC1-211ENST00000519596 SETD2Q9BYW2 2564 aaPredicted RBP0.76□□□□□ -2.29
PABPC1-211ENST00000519596 SACSQ9NZJ4 4579 aa0.76□□□□□ -2.29
PABPC1-211ENST00000519596 MGAQ8IWI9 3026 aa0.75□□□□□ -2.29
PABPC1-211ENST00000519596 NBASA2RRP1 2371 aa0.75□□□□□ -2.29
PABPC1-211ENST00000519596 NBPF19A0A087WUL8 3843 aa0.75□□□□□ -2.29
PABPC1-211ENST00000519596 Q9Y3F1 56 aa0.75□□□□□ -2.29
PABPC1-211ENST00000519596 AKAP13Q12802 2813 aa0.74□□□□□ -2.29
PABPC1-211ENST00000519596 ZNF469Q96JG9 3925 aaPredicted RBP0.74□□□□□ -2.29
PABPC1-211ENST00000519596 ATRQ13535 2644 aa0.74□□□□□ -2.29
PABPC1-211ENST00000519596 DEFB110Q30KQ9 67 aa0.74□□□□□ -2.29
PABPC1-211ENST00000519596 DEFB108BQ8NET1 73 aa0.74□□□□□ -2.29
PABPC1-211ENST00000519596 U3KQA8 63 aa0.74□□□□□ -2.29
PABPC1-211ENST00000519596 ANK2Q01484 3957 aa0.74□□□□□ -2.29
PABPC1-211ENST00000519596 KMT2AQ03164 3969 aa0.73□□□□□ -2.29
PABPC1-211ENST00000519596 MAP1BP46821 2468 aaKnown RBP0.73□□□□□ -2.29
PABPC1-211ENST00000519596 CHD6Q8TD26 2715 aa0.73□□□□□ -2.29
PABPC1-211ENST00000519596 TNRC18O15417 2968 aaPredicted RBP0.72□□□□□ -2.29
PABPC1-211ENST00000519596 FAT2Q9NYQ8 4349 aa0.72□□□□□ -2.29
PABPC1-211ENST00000519596 UNC79Q9P2D8 2635 aa0.72□□□□□ -2.29
PABPC1-211ENST00000519596 AKAP9Q99996 3911 aa0.72□□□□□ -2.29
PABPC1-211ENST00000519596 CHD8Q9HCK8 2581 aa0.71□□□□□ -2.3
PABPC1-211ENST00000519596 DNAH7Q8WXX0 4024 aa0.71□□□□□ -2.3
PABPC1-211ENST00000519596 PIEZO1Q92508 2521 aa0.71□□□□□ -2.3
PABPC1-211ENST00000519596 DNAH3Q8TD57 4116 aa0.71□□□□□ -2.3
PABPC1-211ENST00000519596 KRTAP8-1Q8IUC2 63 aa0.7□□□□□ -2.3
PABPC1-211ENST00000519596 HIVEP3Q5T1R4 2406 aa0.7□□□□□ -2.3
PABPC1-211ENST00000519596 CEP250Q9BV73 2442 aa0.7□□□□□ -2.3
PABPC1-211ENST00000519596 TNXBP22105 4242 aa0.7□□□□□ -2.3
PABPC1-211ENST00000519596 FRAS1Q86XX4 4008 aa0.69□□□□□ -2.3
PABPC1-211ENST00000519596 FBN2P35556 2912 aa0.69□□□□□ -2.3
PABPC1-211ENST00000519596 FAM186AA6NE01 2351 aa0.69□□□□□ -2.3
PABPC1-211ENST00000519596 MYCBP2O75592 4640 aa0.69□□□□□ -2.3
PABPC1-211ENST00000519596 PRM1P04553 51 aa0.69□□□□□ -2.3
PABPC1-211ENST00000519596 LINC01556Q5JQF7 62 aa0.69□□□□□ -2.3
PABPC1-211ENST00000519596 DYNC2H1Q8NCM8 4307 aaKnown RBP0.69□□□□□ -2.3
PABPC1-211ENST00000519596 BDP1A6H8Y1 2624 aa0.68□□□□□ -2.3
PABPC1-211ENST00000519596 NOTCH1P46531 2555 aa0.68□□□□□ -2.3
PABPC1-211ENST00000519596 RPS29P62273 56 aaKnown RBP0.68□□□□□ -2.3
PABPC1-211ENST00000519596 PTPN13Q12923 2485 aa0.68□□□□□ -2.3
PABPC1-211ENST00000519596 DEFB133Q30KQ1 61 aa0.68□□□□□ -2.3
PABPC1-211ENST00000519596 USP24Q9UPU5 2620 aa0.68□□□□□ -2.3
PABPC1-211ENST00000519596 CRYBG3Q68DQ2 2970 aa0.68□□□□□ -2.3
PABPC1-211ENST00000519596 HELZ2Q9BYK8 2649 aaKnown RBP0.68□□□□□ -2.3
PABPC1-211ENST00000519596 AHNAK2Q8IVF2 5795 aa0.67□□□□□ -2.3
PABPC1-211ENST00000519596 A0A096LPF7 62 aa0.67□□□□□ -2.3
PABPC1-211ENST00000519596 RIF1Q5UIP0 2472 aaKnown RBP0.67□□□□□ -2.3
PABPC1-211ENST00000519596 ANK3Q12955 4377 aaKnown RBP0.67□□□□□ -2.3
PABPC1-211ENST00000519596 MTORP42345 2549 aa0.67□□□□□ -2.3
PABPC1-211ENST00000519596 ZFHX4Q86UP3 3567 aa0.66□□□□□ -2.3
PABPC1-211ENST00000519596 PDZD2O15018 2839 aa0.66□□□□□ -2.3
PABPC1-211ENST00000519596 EPG5Q9HCE0 2579 aa0.66□□□□□ -2.3
PABPC1-211ENST00000519596 ACANP16112 2415 aa0.66□□□□□ -2.3
PABPC1-211ENST00000519596 LRRK2Q5S007 2527 aa0.66□□□□□ -2.3
PABPC1-211ENST00000519596 HUWE1Q7Z6Z7 4374 aaKnown RBP0.66□□□□□ -2.3
PABPC1-211ENST00000519596 FRYQ5TBA9 3013 aa0.65□□□□□ -2.3
PABPC1-211ENST00000519596 WDR87Q6ZQQ6 2873 aa0.65□□□□□ -2.31
PABPC1-211ENST00000519596 KRTAP19-3Q7Z4W3 81 aa0.65□□□□□ -2.31
PABPC1-211ENST00000519596 NF1P21359 2839 aa0.65□□□□□ -2.31
PABPC1-211ENST00000519596 DNAH2Q9P225 4427 aa0.65□□□□□ -2.31
PABPC1-211ENST00000519596 GCN1Q92616 2671 aaKnown RBP0.65□□□□□ -2.31
PABPC1-211ENST00000519596 CACNA1AO00555 2505 aa0.65□□□□□ -2.31
PABPC1-211ENST00000519596 FLNCQ14315 2725 aa0.65□□□□□ -2.31
PABPC1-211ENST00000519596 FLGP20930 4061 aaPredicted RBP0.64□□□□□ -2.31
PABPC1-211ENST00000519596 DNAH8Q96JB1 4490 aa0.64□□□□□ -2.31
PABPC1-211ENST00000519596 USP9YO00507 2555 aaPredicted RBP0.64□□□□□ -2.31
PABPC1-211ENST00000519596 ITPR3Q14573 2671 aa0.64□□□□□ -2.31
PABPC1-211ENST00000519596 SPENQ96T58 3664 aaKnown RBP0.64□□□□□ -2.31
PABPC1-211ENST00000519596 PKD1P98161 4303 aa0.64□□□□□ -2.31
PABPC1-211ENST00000519596 PKHD1L1Q86WI1 4243 aa0.64□□□□□ -2.31
PABPC1-211ENST00000519596 DCHS2Q6V1P9 2916 aa0.64□□□□□ -2.31
PABPC1-211ENST00000519596 APCP25054 2843 aa0.64□□□□□ -2.31
PABPC1-211ENST00000519596 SETXQ7Z333 2677 aaKnown RBP0.63□□□□□ -2.31
PABPC1-211ENST00000519596 HECTD4Q9Y4D8 3996 aa0.63□□□□□ -2.31
PABPC1-211ENST00000519596 NCOR2Q9Y618 2525 aa0.63□□□□□ -2.31
PABPC1-211ENST00000519596 CD52P31358 61 aa0.63□□□□□ -2.31
PABPC1-211ENST00000519596 STAB1Q9NY15 2570 aa0.63□□□□□ -2.31
PABPC1-211ENST00000519596 DNAH6Q9C0G6 4158 aa0.63□□□□□ -2.31
PABPC1-211ENST00000519596 KRTAP5-10Q6L8G5 202 aa0.62□□□□□ -2.31
PABPC1-211ENST00000519596 COL12A1Q99715 3063 aa0.62□□□□□ -2.31
PABPC1-211ENST00000519596 SPG11Q96JI7 2443 aa0.62□□□□□ -2.31
PABPC1-211ENST00000519596 ACACBO00763 2458 aa0.61□□□□□ -2.31
PABPC1-211ENST00000519596 NSD1Q96L73 2696 aaPredicted RBP0.61□□□□□ -2.31
PABPC1-211ENST00000519596 COL7A1Q02388 2944 aa0.61□□□□□ -2.31
PABPC1-211ENST00000519596 PKHD1P08F94 4074 aa0.6□□□□□ -2.31
PABPC1-211ENST00000519596 SMR3BP02814 79 aaPredicted RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms