RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 FAM229AH3BQW9 127 aa7.81□□□□□ -1.16
PABPC1-208ENST00000519004 LINC00304Q8N9R0 145 aa7.81□□□□□ -1.16
PABPC1-208ENST00000519004 DNAH9Q9NYC9 4486 aa7.81□□□□□ -1.16
PABPC1-208ENST00000519004 PANO1I0J062 215 aa7.81□□□□□ -1.16
PABPC1-208ENST00000519004 COL7A1Q02388 2944 aa7.8□□□□□ -1.16
PABPC1-208ENST00000519004 NOTCH2Q04721 2471 aa7.79□□□□□ -1.16
PABPC1-208ENST00000519004 ANAPC11Q9NYG5 84 aa7.79□□□□□ -1.16
PABPC1-208ENST00000519004 HELZ2Q9BYK8 2649 aaKnown RBP7.78□□□□□ -1.16
PABPC1-208ENST00000519004 H0YAA0 97 aa7.77□□□□□ -1.17
PABPC1-208ENST00000519004 DNAH8Q96JB1 4490 aa7.75□□□□□ -1.17
PABPC1-208ENST00000519004 TENM4Q6N022 2769 aa7.74□□□□□ -1.17
PABPC1-208ENST00000519004 HECTD1Q9ULT8 2610 aa7.74□□□□□ -1.17
PABPC1-208ENST00000519004 LY6G6CO95867 125 aa7.73□□□□□ -1.17
PABPC1-208ENST00000519004 C14orf177Q52M58 125 aa7.73□□□□□ -1.17
PABPC1-208ENST00000519004 Q6ZSA8 131 aa7.73□□□□□ -1.17
PABPC1-208ENST00000519004 IGKV2D-30A0A075B6S6 120 aa7.71□□□□□ -1.17
PABPC1-208ENST00000519004 ATRQ13535 2644 aa7.69□□□□□ -1.18
PABPC1-208ENST00000519004 SPINK1P00995 79 aa7.68□□□□□ -1.18
PABPC1-208ENST00000519004 FRAS1Q86XX4 4008 aa7.67□□□□□ -1.18
PABPC1-208ENST00000519004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-208ENST00000519004 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
PABPC1-208ENST00000519004 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
PABPC1-208ENST00000519004 FLNBO75369 2602 aaKnown RBP7.66□□□□□ -1.18
PABPC1-208ENST00000519004 USP24Q9UPU5 2620 aa7.65□□□□□ -1.19
PABPC1-208ENST00000519004 SPACA4Q8TDM5 124 aa7.64□□□□□ -1.19
PABPC1-208ENST00000519004 CIRBP-AS1Q8TBR5 109 aa7.63□□□□□ -1.19
PABPC1-208ENST00000519004 NBEAL1Q6ZS30 2694 aa7.63□□□□□ -1.19
PABPC1-208ENST00000519004 PSORS1C2Q9UIG4 136 aa7.63□□□□□ -1.19
PABPC1-208ENST00000519004 HUWE1Q7Z6Z7 4374 aaKnown RBP7.61□□□□□ -1.19
PABPC1-208ENST00000519004 INAFM1C9JVW0 142 aa7.6□□□□□ -1.19
PABPC1-208ENST00000519004 MAST4O15021 2626 aa7.6□□□□□ -1.19
PABPC1-208ENST00000519004 CMYA5Q8N3K9 4069 aa7.6□□□□□ -1.19
PABPC1-208ENST00000519004 DNAH3Q8TD57 4116 aa7.59□□□□□ -1.19
PABPC1-208ENST00000519004 ITPR2Q14571 2701 aa7.59□□□□□ -1.19
PABPC1-208ENST00000519004 TYMSOSQ8TAI1 123 aa7.59□□□□□ -1.19
PABPC1-208ENST00000519004 DNAH17Q9UFH2 4485 aa7.57□□□□□ -1.2
PABPC1-208ENST00000519004 MEGF8Q7Z7M0 2845 aa7.57□□□□□ -1.2
PABPC1-208ENST00000519004 FLG2Q5D862 2391 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-208ENST00000519004 A0A1B0GU33 70 aa7.57□□□□□ -1.2
PABPC1-208ENST00000519004 Q8N1X5 172 aa7.57□□□□□ -1.2
PABPC1-208ENST00000519004 SSBP3-AS1Q7Z2R9 100 aa7.54□□□□□ -1.2
PABPC1-208ENST00000519004 H1FX-AS1Q4G0G2 97 aa7.53□□□□□ -1.2
PABPC1-208ENST00000519004 KMT2BQ9UMN6 2715 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-208ENST00000519004 UBE2DNLQ8IWF7 75 aa7.52□□□□□ -1.2
PABPC1-208ENST00000519004 NOTCH1P46531 2555 aa7.52□□□□□ -1.21
PABPC1-208ENST00000519004 A0A087WTM6 91 aa7.51□□□□□ -1.21
PABPC1-208ENST00000519004 NSD1Q96L73 2696 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-208ENST00000519004 FASNP49327 2511 aaKnown RBP7.5□□□□□ -1.21
PABPC1-208ENST00000519004 Q6ZRN7 208 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-208ENST00000519004 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
PABPC1-208ENST00000519004 DNAH7Q8WXX0 4024 aa7.47□□□□□ -1.21
PABPC1-208ENST00000519004 NDUFAF8A1L188 74 aa7.47□□□□□ -1.21
PABPC1-208ENST00000519004 NUPR2A6NF83 97 aa7.47□□□□□ -1.21
PABPC1-208ENST00000519004 VPS13DQ5THJ4 4388 aa7.45□□□□□ -1.22
PABPC1-208ENST00000519004 C20orf166-AS1Q96NR2 134 aa7.45□□□□□ -1.22
PABPC1-208ENST00000519004 K7ERS5 55 aa7.44□□□□□ -1.22
PABPC1-208ENST00000519004 APLNQ9ULZ1 77 aa7.44□□□□□ -1.22
PABPC1-208ENST00000519004 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
PABPC1-208ENST00000519004 COL6A5A8TX70 2615 aa7.42□□□□□ -1.22
PABPC1-208ENST00000519004 TPRXLQ17RH7 258 aa7.42□□□□□ -1.22
PABPC1-208ENST00000519004 NBDYA0A0U1RRE5 68 aa7.41□□□□□ -1.22
PABPC1-208ENST00000519004 HECTD4Q9Y4D8 3996 aa7.41□□□□□ -1.22
PABPC1-208ENST00000519004 A0A0A0MQY5 61 aa7.41□□□□□ -1.22
PABPC1-208ENST00000519004 TGP01266 2768 aa7.41□□□□□ -1.22
PABPC1-208ENST00000519004 DYNC2H1Q8NCM8 4307 aaKnown RBP7.41□□□□□ -1.22
PABPC1-208ENST00000519004 KRTAP13-2Q52LG2 175 aa7.36□□□□□ -1.23
PABPC1-208ENST00000519004 PLECQ15149 4684 aaKnown RBP7.36□□□□□ -1.23
PABPC1-208ENST00000519004 COX6B2Q6YFQ2 88 aa7.36□□□□□ -1.23
PABPC1-208ENST00000519004 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
PABPC1-208ENST00000519004 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
PABPC1-208ENST00000519004 STAB2Q8WWQ8 2551 aa7.28□□□□□ -1.24
PABPC1-208ENST00000519004 KMT2AQ03164 3969 aa7.26□□□□□ -1.25
PABPC1-208ENST00000519004 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
PABPC1-208ENST00000519004 DNAH2Q9P225 4427 aa7.24□□□□□ -1.25
PABPC1-208ENST00000519004 STAB1Q9NY15 2570 aa7.24□□□□□ -1.25
PABPC1-208ENST00000519004 DNAH11Q96DT5 4516 aa7.23□□□□□ -1.25
PABPC1-208ENST00000519004 KRTAP24-1Q3LI83 254 aa7.22□□□□□ -1.25
PABPC1-208ENST00000519004 PRKDCP78527 4128 aaKnown RBP7.21□□□□□ -1.25
PABPC1-208ENST00000519004 J3QL48 77 aa7.18□□□□□ -1.26
PABPC1-208ENST00000519004 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
PABPC1-208ENST00000519004 FBN3Q75N90 2809 aa7.15□□□□□ -1.26
PABPC1-208ENST00000519004 DNAH6Q9C0G6 4158 aa7.14□□□□□ -1.27
PABPC1-208ENST00000519004 A0A0D9SG42 100 aa7.13□□□□□ -1.27
PABPC1-208ENST00000519004 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
PABPC1-208ENST00000519004 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-208ENST00000519004 J3QKU1 62 aa7.09□□□□□ -1.27
PABPC1-208ENST00000519004 STARD9Q9P2P6 4700 aa7.08□□□□□ -1.28
PABPC1-208ENST00000519004 DNAH5Q8TE73 4624 aa7.07□□□□□ -1.28
PABPC1-208ENST00000519004 LRP1BQ9NZR2 4599 aa7.07□□□□□ -1.28
PABPC1-208ENST00000519004 MGAM2Q2M2H8 2515 aa7.05□□□□□ -1.28
PABPC1-208ENST00000519004 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.28
PABPC1-208ENST00000519004 S4R3F8 94 aa7.02□□□□□ -1.29
PABPC1-208ENST00000519004 LUZP6Q538Z0 58 aa7.01□□□□□ -1.29
PABPC1-208ENST00000519004 C9orf92A6NGG3 77 aa7□□□□□ -1.29
PABPC1-208ENST00000519004 KRTAP12-2P59991 146 aa6.98□□□□□ -1.29
PABPC1-208ENST00000519004 KRTAP3-3Q9BYR6 98 aa6.98□□□□□ -1.29
PABPC1-208ENST00000519004 DMBT1Q9UGM3 2413 aaPredicted RBP6.97□□□□□ -1.29
PABPC1-208ENST00000519004 XP32Q5T750 250 aa6.95□□□□□ -1.3
PABPC1-208ENST00000519004 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
PABPC1-208ENST00000519004 KRTAP10-2P60368 255 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms