RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 DNAH5Q8TE73 4624 aa11.07□□□□□ -0.64
SDC2-202ENST00000518385 LOC101927531A0A1B0GV80 90 aa11.07□□□□□ -0.64
SDC2-202ENST00000518385 A8MUN3 132 aa11.07□□□□□ -0.64
SDC2-202ENST00000518385 PSORS1C2Q9UIG4 136 aa11.07□□□□□ -0.64
SDC2-202ENST00000518385 A0A1B0GVY2 172 aa11.06□□□□□ -0.64
SDC2-202ENST00000518385 KRTAP10-1P60331 282 aa11.06□□□□□ -0.64
SDC2-202ENST00000518385 Q75L30 129 aa11.05□□□□□ -0.64
SDC2-202ENST00000518385 ZNF861PO60384 105 aa11.04□□□□□ -0.64
SDC2-202ENST00000518385 Q6ZSA8 131 aa11.04□□□□□ -0.64
SDC2-202ENST00000518385 LINC00483Q53H64 154 aa11.03□□□□□ -0.64
SDC2-202ENST00000518385 COA5Q86WW8 74 aa11□□□□□ -0.65
SDC2-202ENST00000518385 DNAH8Q96JB1 4490 aa10.99□□□□□ -0.65
SDC2-202ENST00000518385 C8orf17Q9NRJ1 99 aa10.99□□□□□ -0.65
SDC2-202ENST00000518385 CHKB-CPT1BH3BT56 60 aa10.98□□□□□ -0.65
SDC2-202ENST00000518385 CIRBP-AS1Q8TBR5 109 aa10.98□□□□□ -0.65
SDC2-202ENST00000518385 SEC61GP60059 68 aa10.97□□□□□ -0.65
SDC2-202ENST00000518385 Q96NJ1 140 aa10.97□□□□□ -0.65
SDC2-202ENST00000518385 IGLV7-43P04211 117 aa10.96□□□□□ -0.65
SDC2-202ENST00000518385 PRR15LQ9BU68 103 aa10.96□□□□□ -0.65
SDC2-202ENST00000518385 ATP11AUNQ6ZP68 121 aa10.95□□□□□ -0.66
SDC2-202ENST00000518385 LINC01558Q9Y6Z2 57 aa10.95□□□□□ -0.66
SDC2-202ENST00000518385 A0A1B0GVX0 72 aa10.94□□□□□ -0.66
SDC2-202ENST00000518385 CDK2AP2O75956 126 aa10.94□□□□□ -0.66
SDC2-202ENST00000518385 RYR3Q15413 4870 aa10.91□□□□□ -0.66
SDC2-202ENST00000518385 MRPL34Q9BQ48 92 aaKnown RBP10.9□□□□□ -0.66
SDC2-202ENST00000518385 CDC42SE1Q9NRR8 79 aa10.88□□□□□ -0.67
SDC2-202ENST00000518385 PKHD1P08F94 4074 aa10.87□□□□□ -0.67
SDC2-202ENST00000518385 NDUFS5O43920 106 aa10.86□□□□□ -0.67
SDC2-202ENST00000518385 CD164Q04900 197 aa10.86□□□□□ -0.67
SDC2-202ENST00000518385 IGLV9-49A0A0B4J1Y8 123 aa10.86□□□□□ -0.67
SDC2-202ENST00000518385 LRP1BQ9NZR2 4599 aa10.84□□□□□ -0.67
SDC2-202ENST00000518385 A6NED7 52 aa10.84□□□□□ -0.67
SDC2-202ENST00000518385 DYNC1H1Q14204 4646 aaKnown RBP10.83□□□□□ -0.67
SDC2-202ENST00000518385 KTN1-AS1Q86SY8 53 aa10.82□□□□□ -0.68
SDC2-202ENST00000518385 SRRM2Q9UQ35 2752 aaKnown RBP10.81□□□□□ -0.68
SDC2-202ENST00000518385 PCOTHQ58A44 107 aa10.81□□□□□ -0.68
SDC2-202ENST00000518385 IGHV6-1A0A0B4J1U7 121 aa10.79□□□□□ -0.68
SDC2-202ENST00000518385 C8orf87E5RJ46 101 aa10.78□□□□□ -0.68
SDC2-202ENST00000518385 SSBP3-AS1Q7Z2R9 100 aa10.78□□□□□ -0.68
SDC2-202ENST00000518385 LCA10Q71F78 164 aa10.76□□□□□ -0.69
SDC2-202ENST00000518385 HRES1P13985 223 aa10.75□□□□□ -0.69
SDC2-202ENST00000518385 ANAPC11Q9NYG5 84 aa10.73□□□□□ -0.69
SDC2-202ENST00000518385 A6NN06 94 aa10.71□□□□□ -0.69
SDC2-202ENST00000518385 ACYP2P14621 99 aa10.69□□□□□ -0.7
SDC2-202ENST00000518385 SPAG11AQ6PDA7 123 aa10.69□□□□□ -0.7
SDC2-202ENST00000518385 APOBP04114 4563 aaKnown RBP10.69□□□□□ -0.7
SDC2-202ENST00000518385 SMR3BP02814 79 aaPredicted RBP10.68□□□□□ -0.7
SDC2-202ENST00000518385 KRTAP13-3Q3SY46 172 aa10.68□□□□□ -0.7
SDC2-202ENST00000518385 SPTSSBQ8NFR3 76 aa10.68□□□□□ -0.7
SDC2-202ENST00000518385 VPS13BQ7Z7G8 4022 aa10.64□□□□□ -0.71
SDC2-202ENST00000518385 A8MU10 97 aa10.64□□□□□ -0.71
SDC2-202ENST00000518385 C7orf65Q6ZTY9 151 aa10.62□□□□□ -0.71
SDC2-202ENST00000518385 SPINK6Q6UWN8 80 aa10.61□□□□□ -0.71
SDC2-202ENST00000518385 FAM229AH3BQW9 127 aa10.6□□□□□ -0.71
SDC2-202ENST00000518385 DMAC1Q96GE9 116 aa10.6□□□□□ -0.71
SDC2-202ENST00000518385 A0A087X002 238 aa10.58□□□□□ -0.72
SDC2-202ENST00000518385 KRTAP1-4P0C5Y4 121 aa10.58□□□□□ -0.72
SDC2-202ENST00000518385 KRTAP10-4P60372 401 aaPredicted RBP10.58□□□□□ -0.72
SDC2-202ENST00000518385 KRTAP13-2Q52LG2 175 aa10.57□□□□□ -0.72
SDC2-202ENST00000518385 NOTCH2NLQ7Z3S9 236 aa10.55□□□□□ -0.72
SDC2-202ENST00000518385 PRR26Q8N8Z3 221 aa10.55□□□□□ -0.72
SDC2-202ENST00000518385 PLA2G1BP04054 148 aaKnown RBP10.52□□□□□ -0.72
SDC2-202ENST00000518385 SPINK7P58062 85 aa10.52□□□□□ -0.72
SDC2-202ENST00000518385 Q5W150 140 aa10.52□□□□□ -0.72
SDC2-202ENST00000518385 EPPK1P58107 5090 aaKnown RBP10.52□□□□□ -0.73
SDC2-202ENST00000518385 RYR1P21817 5038 aa10.51□□□□□ -0.73
SDC2-202ENST00000518385 LINC00313P59037 77 aa10.5□□□□□ -0.73
SDC2-202ENST00000518385 RBM12B-AS1Q9P1G2 102 aa10.5□□□□□ -0.73
SDC2-202ENST00000518385 FAT1Q14517 4588 aa10.49□□□□□ -0.73
SDC2-202ENST00000518385 HSPG2P98160 4391 aa10.47□□□□□ -0.73
SDC2-202ENST00000518385 IGKV2-30P06310 120 aa10.47□□□□□ -0.73
SDC2-202ENST00000518385 TYMSOSQ8TAI1 123 aa10.47□□□□□ -0.73
SDC2-202ENST00000518385 C4orf48Q5BLP8 95 aa10.46□□□□□ -0.74
SDC2-202ENST00000518385 Q5VSD8 79 aa10.44□□□□□ -0.74
SDC2-202ENST00000518385 SPINK1P00995 79 aa10.43□□□□□ -0.74
SDC2-202ENST00000518385 RPS29P62273 56 aaKnown RBP10.42□□□□□ -0.74
SDC2-202ENST00000518385 KRTAP17-1Q9BYP8 105 aa10.42□□□□□ -0.74
SDC2-202ENST00000518385 A0A1B0GU69 56 aa10.41□□□□□ -0.74
SDC2-202ENST00000518385 KIAA1109Q2LD37 5005 aa10.4□□□□□ -0.75
SDC2-202ENST00000518385 SPATA8Q6RVD6 105 aa10.39□□□□□ -0.75
SDC2-202ENST00000518385 Q8N1X5 172 aa10.39□□□□□ -0.75
SDC2-202ENST00000518385 PKHD1L1Q86WI1 4243 aa10.37□□□□□ -0.75
SDC2-202ENST00000518385 LINC00304Q8N9R0 145 aa10.35□□□□□ -0.75
SDC2-202ENST00000518385 UQCR11O14957 56 aa10.33□□□□□ -0.76
SDC2-202ENST00000518385 KRTAP16-1A8MUX0 517 aa10.31□□□□□ -0.76
SDC2-202ENST00000518385 IGKV2D-30A0A075B6S6 120 aa10.26□□□□□ -0.77
SDC2-202ENST00000518385 MIR22HGQ0VDD5 57 aa10.26□□□□□ -0.77
SDC2-202ENST00000518385 BIRC6Q9NR09 4857 aa10.24□□□□□ -0.77
SDC2-202ENST00000518385 KRTAP10-8P60410 259 aa10.18□□□□□ -0.78
SDC2-202ENST00000518385 KRTAP4-5Q9BYR2 181 aa10.17□□□□□ -0.78
SDC2-202ENST00000518385 RETNLBQ9BQ08 111 aa10.11□□□□□ -0.79
SDC2-202ENST00000518385 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
SDC2-202ENST00000518385 FLG2Q5D862 2391 aaPredicted RBP10.1□□□□□ -0.79
SDC2-202ENST00000518385 LRP1Q07954 4544 aaKnown RBP10.1□□□□□ -0.79
SDC2-202ENST00000518385 FAT3Q8TDW7 4589 aa10.08□□□□□ -0.8
SDC2-202ENST00000518385 HERC2O95714 4834 aa10.07□□□□□ -0.8
SDC2-202ENST00000518385 TNXBP22105 4242 aa10.06□□□□□ -0.8
SDC2-202ENST00000518385 MT1HL1P0DM35 61 aa10.05□□□□□ -0.8
SDC2-202ENST00000518385 LINC01554Q52M75 96 aa10.02□□□□□ -0.81
SDC2-202ENST00000518385 MYCBP2O75592 4640 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms