RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 KRTAP4-9Q9BYQ8 210 aa7.37□□□□□ -1.23
PABPC1-205ENST00000518196 SS18L2Q9UHA2 77 aa7.37□□□□□ -1.23
PABPC1-205ENST00000518196 LOC110117498A0A087WWA1 95 aa7.36□□□□□ -1.23
PABPC1-205ENST00000518196 C14orf132Q9NPU4 83 aa7.36□□□□□ -1.23
PABPC1-205ENST00000518196 HERC1Q15751 4861 aa7.36□□□□□ -1.23
PABPC1-205ENST00000518196 Q6ZQT0 140 aa7.35□□□□□ -1.23
PABPC1-205ENST00000518196 FP248Q71RG6 208 aaPredicted RBP7.35□□□□□ -1.23
PABPC1-205ENST00000518196 A0A087WSZ3 146 aa7.34□□□□□ -1.23
PABPC1-205ENST00000518196 A0A1B0GV90 55 aa7.34□□□□□ -1.23
PABPC1-205ENST00000518196 ASB16-AS1Q495Z4 193 aa7.34□□□□□ -1.23
PABPC1-205ENST00000518196 IGLV7-46A0A075B6I9 117 aa7.32□□□□□ -1.24
PABPC1-205ENST00000518196 A0A1B0GW54 56 aa7.31□□□□□ -1.24
PABPC1-205ENST00000518196 C1orf195Q5TG92 126 aa7.31□□□□□ -1.24
PABPC1-205ENST00000518196 ETDBQ3ZM63 59 aa7.28□□□□□ -1.24
PABPC1-205ENST00000518196 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
PABPC1-205ENST00000518196 A0A0A0MQY5 61 aa7.23□□□□□ -1.25
PABPC1-205ENST00000518196 Q96NJ1 140 aa7.22□□□□□ -1.25
PABPC1-205ENST00000518196 IGKV4-1P06312 121 aa7.21□□□□□ -1.26
PABPC1-205ENST00000518196 NREPQ16612 68 aa7.21□□□□□ -1.26
PABPC1-205ENST00000518196 KRTAP4-11Q9BYQ6 195 aa7.21□□□□□ -1.26
PABPC1-205ENST00000518196 LINC00472Q9H8W2 130 aa7.21□□□□□ -1.26
PABPC1-205ENST00000518196 KRTAP13-3Q3SY46 172 aa7.2□□□□□ -1.26
PABPC1-205ENST00000518196 SIGMAR1Q99720 223 aa7.2□□□□□ -1.26
PABPC1-205ENST00000518196 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
PABPC1-205ENST00000518196 J3KT08 172 aa7.19□□□□□ -1.26
PABPC1-205ENST00000518196 DEFB116Q30KQ4 102 aa7.18□□□□□ -1.26
PABPC1-205ENST00000518196 C9orf92A6NGG3 77 aa7.16□□□□□ -1.26
PABPC1-205ENST00000518196 UBL5Q9BZL1 73 aa7.14□□□□□ -1.27
PABPC1-205ENST00000518196 NDUFB1O75438 58 aa7.13□□□□□ -1.27
PABPC1-205ENST00000518196 LINC00846Q9NV44 126 aa7.13□□□□□ -1.27
PABPC1-205ENST00000518196 Q6ZVQ6 151 aa7.12□□□□□ -1.27
PABPC1-205ENST00000518196 ACYP1P07311 99 aa7.11□□□□□ -1.27
PABPC1-205ENST00000518196 LPAP08519 4548 aa7.1□□□□□ -1.27
PABPC1-205ENST00000518196 IGHV6-1A0A0B4J1U7 121 aa7.1□□□□□ -1.27
PABPC1-205ENST00000518196 A0A1B0GVX0 72 aa7.1□□□□□ -1.27
PABPC1-205ENST00000518196 BPY2O14599 106 aa7.1□□□□□ -1.27
PABPC1-205ENST00000518196 LRP2P98164 4655 aa7.1□□□□□ -1.27
PABPC1-205ENST00000518196 A8MWP4 228 aa7.09□□□□□ -1.27
PABPC1-205ENST00000518196 LINC00313P59037 77 aa7.09□□□□□ -1.27
PABPC1-205ENST00000518196 FAM240AA0A1B0GVK7 77 aa7.08□□□□□ -1.28
PABPC1-205ENST00000518196 C8orf87E5RJ46 101 aa7.08□□□□□ -1.28
PABPC1-205ENST00000518196 DSCR10P59022 87 aa7.08□□□□□ -1.28
PABPC1-205ENST00000518196 J3QR89 54 aa7.07□□□□□ -1.28
PABPC1-205ENST00000518196 KRTAP4-2Q9BYR5 136 aa7.07□□□□□ -1.28
PABPC1-205ENST00000518196 IGKV3D-7A0A0C4DH55 119 aa7.05□□□□□ -1.28
PABPC1-205ENST00000518196 PRR15Q8IV56 129 aa7.04□□□□□ -1.28
PABPC1-205ENST00000518196 MPLKIPQ8TAP9 179 aa7.04□□□□□ -1.28
PABPC1-205ENST00000518196 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
PABPC1-205ENST00000518196 NOTCH2NLQ7Z3S9 236 aa7.02□□□□□ -1.29
PABPC1-205ENST00000518196 C8orf17Q9NRJ1 99 aa7.02□□□□□ -1.29
PABPC1-205ENST00000518196 K7EQZ3 153 aa7.01□□□□□ -1.29
PABPC1-205ENST00000518196 RPL37P61927 97 aaKnown RBP7.01□□□□□ -1.29
PABPC1-205ENST00000518196 CXCL6P80162 114 aa7□□□□□ -1.29
PABPC1-205ENST00000518196 Q75L30 129 aa7□□□□□ -1.29
PABPC1-205ENST00000518196 KRTAP16-1A8MUX0 517 aa6.99□□□□□ -1.29
PABPC1-205ENST00000518196 C20orf166-AS1Q96NR2 134 aa6.99□□□□□ -1.29
PABPC1-205ENST00000518196 A8MUU9 505 aa6.98□□□□□ -1.29
PABPC1-205ENST00000518196 Q8N9L7 120 aa6.97□□□□□ -1.29
PABPC1-205ENST00000518196 ATP5EP2Q5VTU8 51 aa6.96□□□□□ -1.3
PABPC1-205ENST00000518196 ATP11AUNQ6ZP68 121 aa6.96□□□□□ -1.3
PABPC1-205ENST00000518196 MMP24-AS1A0A0U1RRL7 71 aa6.95□□□□□ -1.3
PABPC1-205ENST00000518196 PCOTHQ58A44 107 aa6.95□□□□□ -1.3
PABPC1-205ENST00000518196 LINC00643Q86TS7 51 aa6.95□□□□□ -1.3
PABPC1-205ENST00000518196 hDV103S1A0JD37 113 aa6.94□□□□□ -1.3
PABPC1-205ENST00000518196 K7ERU9 68 aa6.94□□□□□ -1.3
PABPC1-205ENST00000518196 TMEM254Q8TBM7 123 aa6.94□□□□□ -1.3
PABPC1-205ENST00000518196 MRPL34Q9BQ48 92 aaKnown RBP6.93□□□□□ -1.3
PABPC1-205ENST00000518196 CASC2Q6XLA1 102 aa6.91□□□□□ -1.3
PABPC1-205ENST00000518196 WFDC13Q8IUB5 93 aa6.91□□□□□ -1.3
PABPC1-205ENST00000518196 Q8N9P0 234 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-205ENST00000518196 HCG22E2RYF7 251 aa6.9□□□□□ -1.3
PABPC1-205ENST00000518196 MUC17Q685J3 4493 aa6.89□□□□□ -1.31
PABPC1-205ENST00000518196 NDUFS5O43920 106 aa6.87□□□□□ -1.31
PABPC1-205ENST00000518196 HIST1H4AP62805 103 aaKnown RBP6.87□□□□□ -1.31
PABPC1-205ENST00000518196 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
PABPC1-205ENST00000518196 IGKV2-30P06310 120 aa6.85□□□□□ -1.31
PABPC1-205ENST00000518196 ZCCHC13Q8WW36 166 aaKnown RBP6.84□□□□□ -1.31
PABPC1-205ENST00000518196 KRTAP4-1Q9BYQ7 146 aa6.82□□□□□ -1.32
PABPC1-205ENST00000518196 A0A087WVE0 104 aa6.78□□□□□ -1.32
PABPC1-205ENST00000518196 RNF213Q63HN8 5207 aa6.78□□□□□ -1.32
PABPC1-205ENST00000518196 A0A0U1RQV1 116 aa6.77□□□□□ -1.33
PABPC1-205ENST00000518196 TP53AIP1Q9HCN2 124 aa6.77□□□□□ -1.33
PABPC1-205ENST00000518196 IMUPQ9GZP8 106 aa6.75□□□□□ -1.33
PABPC1-205ENST00000518196 MT-ATP8P03928 68 aa6.74□□□□□ -1.33
PABPC1-205ENST00000518196 Q5W150 140 aa6.72□□□□□ -1.33
PABPC1-205ENST00000518196 SPINK7P58062 85 aa6.71□□□□□ -1.34
PABPC1-205ENST00000518196 UQCRQO14949 82 aa6.68□□□□□ -1.34
PABPC1-205ENST00000518196 SCGB1A1P11684 91 aa6.68□□□□□ -1.34
PABPC1-205ENST00000518196 IGKV2D-30A0A075B6S6 120 aa6.66□□□□□ -1.34
PABPC1-205ENST00000518196 C7orf65Q6ZTY9 151 aa6.66□□□□□ -1.34
PABPC1-205ENST00000518196 MUC2Q02817 5179 aa6.66□□□□□ -1.34
PABPC1-205ENST00000518196 COX6B2Q6YFQ2 88 aa6.65□□□□□ -1.34
PABPC1-205ENST00000518196 TRAV22A0A0B4J277 110 aa6.64□□□□□ -1.35
PABPC1-205ENST00000518196 HRES1P13985 223 aa6.64□□□□□ -1.35
PABPC1-205ENST00000518196 RBM12B-AS1Q9P1G2 102 aa6.64□□□□□ -1.35
PABPC1-205ENST00000518196 OCR1Q9BZK8 76 aa6.62□□□□□ -1.35
PABPC1-205ENST00000518196 FAM236AA0A1B0GUQ0 79 aa6.61□□□□□ -1.35
PABPC1-205ENST00000518196 FAM236BA0A1B0GV22 79 aa6.61□□□□□ -1.35
PABPC1-205ENST00000518196 H0Y9P7 68 aa6.61□□□□□ -1.35
PABPC1-205ENST00000518196 ATOX1O00244 68 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms