RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 PKD1L1Q8TDX9 2849 aa6.2□□□□□ -1.42
SMG7-215ENST00000515829 RBM12B-AS1Q9P1G2 102 aa6.19□□□□□ -1.42
SMG7-215ENST00000515829 KTN1-AS1Q86SY8 53 aa6.19□□□□□ -1.42
SMG7-215ENST00000515829 CDC42SE1Q9NRR8 79 aa6.19□□□□□ -1.42
SMG7-215ENST00000515829 OTOGQ6ZRI0 2925 aa6.18□□□□□ -1.42
SMG7-215ENST00000515829 LCE6AA0A183 80 aa6.18□□□□□ -1.42
SMG7-215ENST00000515829 HRES1P13985 223 aa6.17□□□□□ -1.42
SMG7-215ENST00000515829 Q75L30 129 aa6.17□□□□□ -1.42
SMG7-215ENST00000515829 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
SMG7-215ENST00000515829 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
SMG7-215ENST00000515829 A8MU10 97 aa6.14□□□□□ -1.43
SMG7-215ENST00000515829 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
SMG7-215ENST00000515829 SPINK7P58062 85 aa6.13□□□□□ -1.43
SMG7-215ENST00000515829 A0A087X002 238 aa6.13□□□□□ -1.43
SMG7-215ENST00000515829 NOTCH2NLQ7Z3S9 236 aa6.13□□□□□ -1.43
SMG7-215ENST00000515829 LINC01558Q9Y6Z2 57 aa6.13□□□□□ -1.43
SMG7-215ENST00000515829 TRRAPQ9Y4A5 3859 aa6.1□□□□□ -1.43
SMG7-215ENST00000515829 Q8N1X5 172 aa6.1□□□□□ -1.43
SMG7-215ENST00000515829 ZNF469Q96JG9 3925 aaPredicted RBP6.08□□□□□ -1.44
SMG7-215ENST00000515829 LCA10Q71F78 164 aa6.08□□□□□ -1.44
SMG7-215ENST00000515829 Q6ZR54 194 aa6.06□□□□□ -1.44
SMG7-215ENST00000515829 Q5W150 140 aa6.06□□□□□ -1.44
SMG7-215ENST00000515829 LINC00483Q53H64 154 aa6.05□□□□□ -1.44
SMG7-215ENST00000515829 ANK3Q12955 4377 aaKnown RBP6.05□□□□□ -1.44
SMG7-215ENST00000515829 Q6ZSA8 131 aa6.04□□□□□ -1.44
SMG7-215ENST00000515829 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
SMG7-215ENST00000515829 Q6ZRN7 208 aaPredicted RBP6.02□□□□□ -1.45
SMG7-215ENST00000515829 KRTAP13-1Q8IUC0 172 aa6.02□□□□□ -1.45
SMG7-215ENST00000515829 A0A1B0GU33 70 aa6□□□□□ -1.45
SMG7-215ENST00000515829 TENM2Q9NT68 2774 aa5.99□□□□□ -1.45
SMG7-215ENST00000515829 KRTAP10-2P60368 255 aa5.98□□□□□ -1.45
SMG7-215ENST00000515829 A0A0D9SG42 100 aa5.98□□□□□ -1.45
SMG7-215ENST00000515829 SRRM2Q9UQ35 2752 aaKnown RBP5.96□□□□□ -1.45
SMG7-215ENST00000515829 AKAP9Q99996 3911 aa5.96□□□□□ -1.46
SMG7-215ENST00000515829 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
SMG7-215ENST00000515829 DMAC1Q96GE9 116 aa5.94□□□□□ -1.46
SMG7-215ENST00000515829 CSAG1Q6PB30 78 aa5.93□□□□□ -1.46
SMG7-215ENST00000515829 KRTAP10-1P60331 282 aa5.92□□□□□ -1.46
SMG7-215ENST00000515829 A6NN06 94 aa5.9□□□□□ -1.46
SMG7-215ENST00000515829 S4R3F8 94 aa5.89□□□□□ -1.47
SMG7-215ENST00000515829 TGP01266 2768 aa5.88□□□□□ -1.47
SMG7-215ENST00000515829 CAMK2N1Q7Z7J9 78 aa5.87□□□□□ -1.47
SMG7-215ENST00000515829 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
SMG7-215ENST00000515829 KRTAP13-2Q52LG2 175 aa5.85□□□□□ -1.47
SMG7-215ENST00000515829 DMBT1Q9UGM3 2413 aaPredicted RBP5.85□□□□□ -1.47
SMG7-215ENST00000515829 ADM2Q7Z4H4 148 aa5.84□□□□□ -1.47
SMG7-215ENST00000515829 LUZP6Q538Z0 58 aa5.84□□□□□ -1.48
SMG7-215ENST00000515829 Q5VSD8 79 aa5.83□□□□□ -1.48
SMG7-215ENST00000515829 ASB16-AS1Q495Z4 193 aa5.83□□□□□ -1.48
SMG7-215ENST00000515829 RPS29P62273 56 aaKnown RBP5.79□□□□□ -1.48
SMG7-215ENST00000515829 CSMD3Q7Z407 3707 aa5.79□□□□□ -1.48
SMG7-215ENST00000515829 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
SMG7-215ENST00000515829 M0R2T5 61 aa5.78□□□□□ -1.48
SMG7-215ENST00000515829 R4GN34 69 aa5.77□□□□□ -1.49
SMG7-215ENST00000515829 RPL37P61927 97 aaKnown RBP5.75□□□□□ -1.49
SMG7-215ENST00000515829 FLG2Q5D862 2391 aaPredicted RBP5.75□□□□□ -1.49
SMG7-215ENST00000515829 COL7A1Q02388 2944 aa5.73□□□□□ -1.49
SMG7-215ENST00000515829 H1FX-AS1Q4G0G2 97 aa5.73□□□□□ -1.49
SMG7-215ENST00000515829 FBN3Q75N90 2809 aa5.71□□□□□ -1.5
SMG7-215ENST00000515829 ROMO1P60602 79 aa5.69□□□□□ -1.5
SMG7-215ENST00000515829 KRTAP1-4P0C5Y4 121 aa5.65□□□□□ -1.51
SMG7-215ENST00000515829 M0QZ58 72 aa5.64□□□□□ -1.51
SMG7-215ENST00000515829 KRTAP13-3Q3SY46 172 aa5.64□□□□□ -1.51
SMG7-215ENST00000515829 KRTAP21-3Q3LHN1 58 aa5.63□□□□□ -1.51
SMG7-215ENST00000515829 H3BS24 57 aa5.63□□□□□ -1.51
SMG7-215ENST00000515829 MEGF8Q7Z7M0 2845 aa5.63□□□□□ -1.51
SMG7-215ENST00000515829 KRTAP16-1A8MUX0 517 aa5.62□□□□□ -1.51
SMG7-215ENST00000515829 HUWE1Q7Z6Z7 4374 aaKnown RBP5.59□□□□□ -1.52
SMG7-215ENST00000515829 A0A0A0MQY5 61 aa5.55□□□□□ -1.52
SMG7-215ENST00000515829 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
SMG7-215ENST00000515829 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
SMG7-215ENST00000515829 DNAH10Q8IVF4 4471 aa5.52□□□□□ -1.53
SMG7-215ENST00000515829 A8MUU9 505 aa5.51□□□□□ -1.53
SMG7-215ENST00000515829 H0YAA0 97 aa5.51□□□□□ -1.53
SMG7-215ENST00000515829 C20orf166-AS1Q96NR2 134 aa5.49□□□□□ -1.53
SMG7-215ENST00000515829 ANK2Q01484 3957 aa5.39□□□□□ -1.55
SMG7-215ENST00000515829 PLECQ15149 4684 aaKnown RBP5.38□□□□□ -1.55
SMG7-215ENST00000515829 DNAH9Q9NYC9 4486 aa5.36□□□□□ -1.55
SMG7-215ENST00000515829 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
SMG7-215ENST00000515829 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
SMG7-215ENST00000515829 DNAH1Q9P2D7 4330 aa5.3□□□□□ -1.56
SMG7-215ENST00000515829 XP32Q5T750 250 aa5.3□□□□□ -1.56
SMG7-215ENST00000515829 LYSTQ99698 3801 aa5.29□□□□□ -1.56
SMG7-215ENST00000515829 TNP1P09430 55 aa5.28□□□□□ -1.56
SMG7-215ENST00000515829 P0C880 135 aa5.27□□□□□ -1.57
SMG7-215ENST00000515829 NDUFAF8A1L188 74 aa5.24□□□□□ -1.57
SMG7-215ENST00000515829 TPRXLQ17RH7 258 aa5.24□□□□□ -1.57
SMG7-215ENST00000515829 DNAH11Q96DT5 4516 aa5.24□□□□□ -1.57
SMG7-215ENST00000515829 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
SMG7-215ENST00000515829 STARD9Q9P2P6 4700 aa5.22□□□□□ -1.57
SMG7-215ENST00000515829 DNAH8Q96JB1 4490 aa5.2□□□□□ -1.58
SMG7-215ENST00000515829 A0A1B0GVY2 172 aa5.19□□□□□ -1.58
SMG7-215ENST00000515829 CMYA5Q8N3K9 4069 aa5.17□□□□□ -1.58
SMG7-215ENST00000515829 VPS13DQ5THJ4 4388 aa5.16□□□□□ -1.58
SMG7-215ENST00000515829 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
SMG7-215ENST00000515829 KMT2AQ03164 3969 aa5.14□□□□□ -1.59
SMG7-215ENST00000515829 KRTAP13-4Q3LI77 160 aa5.14□□□□□ -1.59
SMG7-215ENST00000515829 FRAS1Q86XX4 4008 aa5.14□□□□□ -1.59
SMG7-215ENST00000515829 DNAH17Q9UFH2 4485 aa5.14□□□□□ -1.59
SMG7-215ENST00000515829 DNAH3Q8TD57 4116 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms