RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 LRRC7Q96NW7 1537 aa-0.14□□□□□ -2.43
PHF3-211ENST00000514822 BCORQ6W2J9 1755 aa-0.14□□□□□ -2.43
PHF3-211ENST00000514822 TJP1Q07157 1748 aa-0.15□□□□□ -2.43
PHF3-211ENST00000514822 KNL1Q8NG31 2342 aa-0.15□□□□□ -2.43
PHF3-211ENST00000514822 UMAD1C9J7I0 102 aa-0.15□□□□□ -2.43
PHF3-211ENST00000514822 SPRR2FQ96RM1 72 aa-0.15□□□□□ -2.43
PHF3-211ENST00000514822 ST20Q9HBF5 79 aa-0.15□□□□□ -2.43
PHF3-211ENST00000514822 DNAH2Q9P225 4427 aa-0.16□□□□□ -2.43
PHF3-211ENST00000514822 NDUFA3O95167 84 aa-0.16□□□□□ -2.44
PHF3-211ENST00000514822 PRO3102Q9H379 93 aa-0.16□□□□□ -2.44
PHF3-211ENST00000514822 QSER1Q2KHR3 1735 aa-0.16□□□□□ -2.44
PHF3-211ENST00000514822 CCDC88BA6NC98 1476 aa-0.16□□□□□ -2.44
PHF3-211ENST00000514822 RGPD4Q7Z3J3 1758 aa-0.17□□□□□ -2.44
PHF3-211ENST00000514822 DEFB121Q5J5C9 76 aa-0.18□□□□□ -2.44
PHF3-211ENST00000514822 PREX1Q8TCU6 1659 aa-0.18□□□□□ -2.44
PHF3-211ENST00000514822 DNAH11Q96DT5 4516 aa-0.19□□□□□ -2.44
PHF3-211ENST00000514822 MAP3K4Q9Y6R4 1608 aa-0.19□□□□□ -2.44
PHF3-211ENST00000514822 A0A087WXM4 84 aa-0.19□□□□□ -2.44
PHF3-211ENST00000514822 TDRG1Q3Y452 100 aa-0.19□□□□□ -2.44
PHF3-211ENST00000514822 CLASP1Q7Z460 1538 aa-0.19□□□□□ -2.44
PHF3-211ENST00000514822 VPS13DQ5THJ4 4388 aa-0.19□□□□□ -2.44
PHF3-211ENST00000514822 RGPD3A6NKT7 1758 aaPredicted RBP-0.19□□□□□ -2.44
PHF3-211ENST00000514822 PTPN23Q9H3S7 1636 aa-0.2□□□□□ -2.44
PHF3-211ENST00000514822 DNAH8Q96JB1 4490 aa-0.2□□□□□ -2.44
PHF3-211ENST00000514822 MRPL33O75394 65 aaKnown RBP-0.2□□□□□ -2.44
PHF3-211ENST00000514822 LINC00158P58513 81 aa-0.2□□□□□ -2.44
PHF3-211ENST00000514822 RGPD2P0DJD1 1756 aa-0.2□□□□□ -2.44
PHF3-211ENST00000514822 KIF14Q15058 1648 aa-0.2□□□□□ -2.44
PHF3-211ENST00000514822 NCOA2Q15596 1464 aa-0.21□□□□□ -2.44
PHF3-211ENST00000514822 PPLO60437 1756 aa-0.21□□□□□ -2.44
PHF3-211ENST00000514822 LCE6AA0A183 80 aa-0.21□□□□□ -2.44
PHF3-211ENST00000514822 RB1CC1Q8TDY2 1594 aa-0.21□□□□□ -2.44
PHF3-211ENST00000514822 TMEM131LA2VDJ0 1609 aa-0.22□□□□□ -2.44
PHF3-211ENST00000514822 C9orf92A6NGG3 77 aa-0.22□□□□□ -2.44
PHF3-211ENST00000514822 IFI6P09912 130 aa-0.22□□□□□ -2.44
PHF3-211ENST00000514822 CCDC18Q5T9S5 1454 aa-0.22□□□□□ -2.45
PHF3-211ENST00000514822 ABCC1P33527 1531 aa-0.23□□□□□ -2.45
PHF3-211ENST00000514822 EFCAB6Q5THR3 1501 aa-0.23□□□□□ -2.45
PHF3-211ENST00000514822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.23□□□□□ -2.45
PHF3-211ENST00000514822 KIAA0586Q9BVV6 1533 aa-0.23□□□□□ -2.45
PHF3-211ENST00000514822 ADAMTS12P58397 1594 aa-0.23□□□□□ -2.45
PHF3-211ENST00000514822 MAGI3Q5TCQ9 1506 aa-0.23□□□□□ -2.45
PHF3-211ENST00000514822 NWD1Q149M9 1564 aa-0.23□□□□□ -2.45
PHF3-211ENST00000514822 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.23□□□□□ -2.45
PHF3-211ENST00000514822 RGPD1P0DJD0 1748 aa-0.24□□□□□ -2.45
PHF3-211ENST00000514822 TIAM2Q8IVF5 1701 aa-0.24□□□□□ -2.45
PHF3-211ENST00000514822 LTN1O94822 1766 aa-0.24□□□□□ -2.45
PHF3-211ENST00000514822 NDUFA4O00483 81 aa-0.24□□□□□ -2.45
PHF3-211ENST00000514822 NREPQ16612 68 aa-0.24□□□□□ -2.45
PHF3-211ENST00000514822 KRTAP19-7Q3SYF9 63 aa-0.24□□□□□ -2.45
PHF3-211ENST00000514822 SUPT6HQ7KZ85 1726 aaKnown RBP-0.24□□□□□ -2.45
PHF3-211ENST00000514822 DEFB131BA0A096LNP1 70 aa-0.25□□□□□ -2.45
PHF3-211ENST00000514822 LYNX1G3V0Z9 82 aa-0.25□□□□□ -2.45
PHF3-211ENST00000514822 H3BUT2 72 aa-0.25□□□□□ -2.45
PHF3-211ENST00000514822 SMIM13P0DJ93 91 aa-0.25□□□□□ -2.45
PHF3-211ENST00000514822 ANKRD50Q9ULJ7 1429 aa-0.25□□□□□ -2.45
PHF3-211ENST00000514822 USP32Q8NFA0 1604 aa-0.25□□□□□ -2.45
PHF3-211ENST00000514822 UBR1Q8IWV7 1749 aa-0.25□□□□□ -2.45
PHF3-211ENST00000514822 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.26□□□□□ -2.45
PHF3-211ENST00000514822 SMR3BP02814 79 aaPredicted RBP-0.26□□□□□ -2.45
PHF3-211ENST00000514822 KRTAP6-2Q3LI66 62 aa-0.26□□□□□ -2.45
PHF3-211ENST00000514822 BVES-AS1Q5T3Y7 98 aa-0.26□□□□□ -2.45
PHF3-211ENST00000514822 DEPDC5O75140 1603 aa-0.27□□□□□ -2.45
PHF3-211ENST00000514822 C18orf32Q8TCD1 76 aa-0.27□□□□□ -2.45
PHF3-211ENST00000514822 UBL5Q9BZL1 73 aa-0.27□□□□□ -2.45
PHF3-211ENST00000514822 WIZO95785 1651 aa-0.27□□□□□ -2.45
PHF3-211ENST00000514822 DIP2BQ9P265 1576 aa-0.28□□□□□ -2.45
PHF3-211ENST00000514822 ANKARQ7Z5J8 1434 aa-0.28□□□□□ -2.45
PHF3-211ENST00000514822 PRLHP81277 87 aa-0.28□□□□□ -2.45
PHF3-211ENST00000514822 POLR1AO95602 1720 aaPredicted RBP-0.28□□□□□ -2.45
PHF3-211ENST00000514822 PLXNC1O60486 1568 aa-0.28□□□□□ -2.45
PHF3-211ENST00000514822 THOC2Q8NI27 1593 aaKnown RBP-0.28□□□□□ -2.45
PHF3-211ENST00000514822 ERVK-7P63135 1459 aa-0.29□□□□□ -2.46
PHF3-211ENST00000514822 H3BNG1 76 aa-0.29□□□□□ -2.46
PHF3-211ENST00000514822 PIK3C2BO00750 1634 aa-0.29□□□□□ -2.46
PHF3-211ENST00000514822 KDM5DQ9BY66 1539 aa-0.29□□□□□ -2.46
PHF3-211ENST00000514822 DCAF1Q9Y4B6 1507 aa-0.29□□□□□ -2.46
PHF3-211ENST00000514822 MT1AP04731 61 aa-0.3□□□□□ -2.46
PHF3-211ENST00000514822 KCNQ1DNQ9H478 68 aa-0.3□□□□□ -2.46
PHF3-211ENST00000514822 RALGAPBQ86X10 1494 aa-0.3□□□□□ -2.46
PHF3-211ENST00000514822 HFM1A2PYH4 1435 aa-0.3□□□□□ -2.46
PHF3-211ENST00000514822 ARFGEF2Q9Y6D5 1785 aa-0.31□□□□□ -2.46
PHF3-211ENST00000514822 H0YAA0 97 aa-0.31□□□□□ -2.46
PHF3-211ENST00000514822 C4AP0C0L4 1744 aa-0.31□□□□□ -2.46
PHF3-211ENST00000514822 C4BP0C0L5 1744 aa-0.31□□□□□ -2.46
PHF3-211ENST00000514822 DOT1LQ8TEK3 1739 aa-0.31□□□□□ -2.46
PHF3-211ENST00000514822 ARHGAP35Q9NRY4 1499 aa-0.32□□□□□ -2.46
PHF3-211ENST00000514822 IAPPP10997 89 aa-0.32□□□□□ -2.46
PHF3-211ENST00000514822 DEFB130BP0DP73 79 aa-0.33□□□□□ -2.46
PHF3-211ENST00000514822 DEFB130AP0DP74 79 aa-0.33□□□□□ -2.46
PHF3-211ENST00000514822 DEFA5Q01523 94 aa-0.33□□□□□ -2.46
PHF3-211ENST00000514822 CFAP74Q9C0B2 1584 aa-0.34□□□□□ -2.46
PHF3-211ENST00000514822 RRBP1Q9P2E9 1410 aaKnown RBP-0.35□□□□□ -2.47
PHF3-211ENST00000514822 MT1HP80294 61 aa-0.35□□□□□ -2.47
PHF3-211ENST00000514822 KRTAP19-8Q3LI54 63 aa-0.35□□□□□ -2.47
PHF3-211ENST00000514822 ASXL1Q8IXJ9 1541 aa-0.35□□□□□ -2.47
PHF3-211ENST00000514822 MAP3K1Q13233 1512 aa-0.36□□□□□ -2.47
PHF3-211ENST00000514822 ETDCA0A1B0GVM5 59 aa-0.36□□□□□ -2.47
PHF3-211ENST00000514822 H3BVH4 76 aa-0.36□□□□□ -2.47
PHF3-211ENST00000514822 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms