RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 SPACA4Q8TDM5 124 aa5.03□□□□□ -1.6
GPBP1-208ENST00000514387 ACANP16112 2415 aa5.03□□□□□ -1.6
GPBP1-208ENST00000514387 CSMD2Q7Z408 3487 aa5.02□□□□□ -1.61
GPBP1-208ENST00000514387 SONP18583 2426 aaKnown RBP5.02□□□□□ -1.61
GPBP1-208ENST00000514387 F8P00451 2351 aa5.01□□□□□ -1.61
GPBP1-208ENST00000514387 ANAPC11Q9NYG5 84 aa5.01□□□□□ -1.61
GPBP1-208ENST00000514387 SPINK6Q6UWN8 80 aa5.01□□□□□ -1.61
GPBP1-208ENST00000514387 OTOGQ6ZRI0 2925 aa5□□□□□ -1.61
GPBP1-208ENST00000514387 PANO1I0J062 215 aa5□□□□□ -1.61
GPBP1-208ENST00000514387 KRTAP1-5Q9BYS1 174 aa5□□□□□ -1.61
GPBP1-208ENST00000514387 NIPBLQ6KC79 2804 aaeCLIP4.99□□□□□ -1.613e-6■■□□□ 13.2
GPBP1-208ENST00000514387 UBE2DNLQ8IWF7 75 aa4.97□□□□□ -1.61
GPBP1-208ENST00000514387 PSORS1C2Q9UIG4 136 aa4.96□□□□□ -1.62
GPBP1-208ENST00000514387 NF1P21359 2839 aa4.96□□□□□ -1.62
GPBP1-208ENST00000514387 ITPR2Q14571 2701 aa4.96□□□□□ -1.62
GPBP1-208ENST00000514387 SETD2Q9BYW2 2564 aaPredicted RBP4.96□□□□□ -1.62
GPBP1-208ENST00000514387 HIVEP1P15822 2718 aa4.96□□□□□ -1.62
GPBP1-208ENST00000514387 Q6ZSA8 131 aa4.96□□□□□ -1.62
GPBP1-208ENST00000514387 CIRBP-AS1Q8TBR5 109 aa4.96□□□□□ -1.62
GPBP1-208ENST00000514387 H0YAA0 97 aa4.95□□□□□ -1.62
GPBP1-208ENST00000514387 SMR3AQ99954 134 aa4.94□□□□□ -1.62
GPBP1-208ENST00000514387 FLNAP21333 2647 aaKnown RBP4.94□□□□□ -1.62
GPBP1-208ENST00000514387 A0A1B0GU33 70 aa4.94□□□□□ -1.62
GPBP1-208ENST00000514387 UBR5O95071 2799 aaPredicted RBP4.93□□□□□ -1.62
GPBP1-208ENST00000514387 TENM4Q6N022 2769 aa4.93□□□□□ -1.62
GPBP1-208ENST00000514387 APLNQ9ULZ1 77 aa4.92□□□□□ -1.62
GPBP1-208ENST00000514387 H1FX-AS1Q4G0G2 97 aa4.92□□□□□ -1.62
GPBP1-208ENST00000514387 NBDYA0A0U1RRE5 68 aa4.91□□□□□ -1.62
GPBP1-208ENST00000514387 Q6ZRN7 208 aaPredicted RBP4.91□□□□□ -1.62
GPBP1-208ENST00000514387 SPINT4Q6UDR6 99 aa4.89□□□□□ -1.63
GPBP1-208ENST00000514387 CAMK2N1Q7Z7J9 78 aa4.89□□□□□ -1.63
GPBP1-208ENST00000514387 ZNF469Q96JG9 3925 aaPredicted RBP4.85□□□□□ -1.63
GPBP1-208ENST00000514387 NBEAL1Q6ZS30 2694 aa4.85□□□□□ -1.63
GPBP1-208ENST00000514387 SPINK1P00995 79 aa4.85□□□□□ -1.63
GPBP1-208ENST00000514387 ATRQ13535 2644 aa4.84□□□□□ -1.63
GPBP1-208ENST00000514387 PDZD2O15018 2839 aa4.83□□□□□ -1.64
GPBP1-208ENST00000514387 TPRXLQ17RH7 258 aa4.82□□□□□ -1.64
GPBP1-208ENST00000514387 VWFP04275 2813 aa4.82□□□□□ -1.64
GPBP1-208ENST00000514387 COX6B2Q6YFQ2 88 aa4.82□□□□□ -1.64
GPBP1-208ENST00000514387 CUBNO60494 3623 aa4.81□□□□□ -1.64
GPBP1-208ENST00000514387 TYMSOSQ8TAI1 123 aa4.8□□□□□ -1.64
GPBP1-208ENST00000514387 Q8N1X5 172 aa4.8□□□□□ -1.64
GPBP1-208ENST00000514387 SRRM2Q9UQ35 2752 aaKnown RBP4.77□□□□□ -1.65
GPBP1-208ENST00000514387 DNAH3Q8TD57 4116 aa4.76□□□□□ -1.65
GPBP1-208ENST00000514387 TENM3Q9P273 2699 aa4.76□□□□□ -1.65
GPBP1-208ENST00000514387 STAB1Q9NY15 2570 aa4.76□□□□□ -1.65
GPBP1-208ENST00000514387 PKD1L1Q8TDX9 2849 aa4.76□□□□□ -1.65
GPBP1-208ENST00000514387 COL6A5A8TX70 2615 aa4.76□□□□□ -1.65
GPBP1-208ENST00000514387 RPL37P61927 97 aaKnown RBP4.76□□□□□ -1.65
GPBP1-208ENST00000514387 RPS29P62273 56 aaKnown RBP4.76□□□□□ -1.65
GPBP1-208ENST00000514387 KRTAP13-2Q52LG2 175 aa4.76□□□□□ -1.65
GPBP1-208ENST00000514387 ANK2Q01484 3957 aa4.76□□□□□ -1.65
GPBP1-208ENST00000514387 NOTCH1P46531 2555 aa4.76□□□□□ -1.65
GPBP1-208ENST00000514387 DNAH8Q96JB1 4490 aa4.73□□□□□ -1.65
GPBP1-208ENST00000514387 KRTAP24-1Q3LI83 254 aa4.72□□□□□ -1.65
GPBP1-208ENST00000514387 DYNC2H1Q8NCM8 4307 aaKnown RBP4.72□□□□□ -1.65
GPBP1-208ENST00000514387 DNAH10Q8IVF4 4471 aa4.71□□□□□ -1.65
GPBP1-208ENST00000514387 HUWE1Q7Z6Z7 4374 aaKnown RBP4.7□□□□□ -1.66
GPBP1-208ENST00000514387 KRTAP3-1Q9BYR8 98 aa4.69□□□□□ -1.66
GPBP1-208ENST00000514387 TRRAPQ9Y4A5 3859 aa4.68□□□□□ -1.66
GPBP1-208ENST00000514387 CRIPTQ9P021 101 aa4.68□□□□□ -1.66
GPBP1-208ENST00000514387 DNAH9Q9NYC9 4486 aa4.68□□□□□ -1.66
GPBP1-208ENST00000514387 TENM1Q9UKZ4 2725 aa4.68□□□□□ -1.66
GPBP1-208ENST00000514387 MGAM2Q2M2H8 2515 aa4.66□□□□□ -1.66
GPBP1-208ENST00000514387 VPS13DQ5THJ4 4388 aa4.66□□□□□ -1.66
GPBP1-208ENST00000514387 NSD1Q96L73 2696 aaPredicted RBP4.65□□□□□ -1.66
GPBP1-208ENST00000514387 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
GPBP1-208ENST00000514387 LYSTQ99698 3801 aa4.65□□□□□ -1.67
GPBP1-208ENST00000514387 FBN1P35555 2871 aaKnown RBP4.63□□□□□ -1.67
GPBP1-208ENST00000514387 DNAH17Q9UFH2 4485 aa4.63□□□□□ -1.67
GPBP1-208ENST00000514387 CMYA5Q8N3K9 4069 aa4.62□□□□□ -1.67
GPBP1-208ENST00000514387 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
GPBP1-208ENST00000514387 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.68
GPBP1-208ENST00000514387 FRAS1Q86XX4 4008 aa4.58□□□□□ -1.68
GPBP1-208ENST00000514387 PRKDCP78527 4128 aaKnown RBP4.54□□□□□ -1.68
GPBP1-208ENST00000514387 S4R3F8 94 aa4.54□□□□□ -1.68
GPBP1-208ENST00000514387 XP32Q5T750 250 aa4.53□□□□□ -1.68
GPBP1-208ENST00000514387 KRTAP3-2Q9BYR7 98 aa4.52□□□□□ -1.69
GPBP1-208ENST00000514387 HECTD4Q9Y4D8 3996 aa4.52□□□□□ -1.69
GPBP1-208ENST00000514387 DNAH7Q8WXX0 4024 aa4.52□□□□□ -1.69
GPBP1-208ENST00000514387 KRTAP13-4Q3LI77 160 aa4.52□□□□□ -1.69
GPBP1-208ENST00000514387 C10orf95Q9H7T3 257 aa4.52□□□□□ -1.69
GPBP1-208ENST00000514387 FLG2Q5D862 2391 aaPredicted RBP4.51□□□□□ -1.69
GPBP1-208ENST00000514387 MEGF8Q7Z7M0 2845 aa4.51□□□□□ -1.69
GPBP1-208ENST00000514387 CSMD3Q7Z407 3707 aa4.5□□□□□ -1.69
GPBP1-208ENST00000514387 A0A0D9SG42 100 aa4.49□□□□□ -1.69
GPBP1-208ENST00000514387 TGP01266 2768 aa4.49□□□□□ -1.69
GPBP1-208ENST00000514387 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
GPBP1-208ENST00000514387 KRTAP3-3Q9BYR6 98 aa4.48□□□□□ -1.69
GPBP1-208ENST00000514387 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
GPBP1-208ENST00000514387 PLECQ15149 4684 aaKnown RBP4.47□□□□□ -1.69
GPBP1-208ENST00000514387 COL7A1Q02388 2944 aa4.45□□□□□ -1.7
GPBP1-208ENST00000514387 DNAH11Q96DT5 4516 aa4.45□□□□□ -1.7
GPBP1-208ENST00000514387 DNAH2Q9P225 4427 aa4.45□□□□□ -1.7
GPBP1-208ENST00000514387 C9orf92A6NGG3 77 aa4.44□□□□□ -1.7
GPBP1-208ENST00000514387 KRTAP10-2P60368 255 aa4.44□□□□□ -1.7
GPBP1-208ENST00000514387 DNAH6Q9C0G6 4158 aa4.44□□□□□ -1.7
GPBP1-208ENST00000514387 M0QZ58 72 aa4.44□□□□□ -1.7
GPBP1-208ENST00000514387 KRTAP10-1P60331 282 aa4.44□□□□□ -1.7
GPBP1-208ENST00000514387 KRTAP21-3Q3LHN1 58 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms