RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 Q1T7F1 81 aa7.96□□□□□ -1.14
PRDM16-208ENST00000514189 A0A0D9SG42 100 aa7.95□□□□□ -1.14
PRDM16-208ENST00000514189 IGLV7-46A0A075B6I9 117 aa7.94□□□□□ -1.14
PRDM16-208ENST00000514189 KTN1-AS1Q86SY8 53 aa7.92□□□□□ -1.14
PRDM16-208ENST00000514189 KRTAP11-1Q8IUC1 163 aa7.92□□□□□ -1.14
PRDM16-208ENST00000514189 ANK3Q12955 4377 aaKnown RBP7.91□□□□□ -1.14
PRDM16-208ENST00000514189 PRAC1Q96KF2 57 aa7.91□□□□□ -1.14
PRDM16-208ENST00000514189 KRTAP4-16G5E9R7 235 aaPredicted RBP7.9□□□□□ -1.14
PRDM16-208ENST00000514189 CDC42SE1Q9NRR8 79 aa7.89□□□□□ -1.15
PRDM16-208ENST00000514189 SPINK7P58062 85 aa7.88□□□□□ -1.15
PRDM16-208ENST00000514189 Q5VV11 94 aa7.88□□□□□ -1.15
PRDM16-208ENST00000514189 SPINT4Q6UDR6 99 aa7.87□□□□□ -1.15
PRDM16-208ENST00000514189 A0A087X002 238 aa7.86□□□□□ -1.15
PRDM16-208ENST00000514189 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
PRDM16-208ENST00000514189 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
PRDM16-208ENST00000514189 LINC01554Q52M75 96 aa7.86□□□□□ -1.15
PRDM16-208ENST00000514189 CRIPTQ9P021 101 aa7.82□□□□□ -1.16
PRDM16-208ENST00000514189 SPRR1BP22528 89 aa7.81□□□□□ -1.16
PRDM16-208ENST00000514189 KRTAP10-2P60368 255 aa7.81□□□□□ -1.16
PRDM16-208ENST00000514189 A8MU10 97 aa7.8□□□□□ -1.16
PRDM16-208ENST00000514189 Q5W150 140 aa7.79□□□□□ -1.16
PRDM16-208ENST00000514189 PLAC8Q9NZF1 115 aa7.79□□□□□ -1.16
PRDM16-208ENST00000514189 LCA10Q71F78 164 aa7.79□□□□□ -1.16
PRDM16-208ENST00000514189 RBM12B-AS1Q9P1G2 102 aa7.79□□□□□ -1.16
PRDM16-208ENST00000514189 Q75L30 129 aa7.77□□□□□ -1.17
PRDM16-208ENST00000514189 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
PRDM16-208ENST00000514189 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
PRDM16-208ENST00000514189 KRTAP10-1P60331 282 aa7.73□□□□□ -1.17
PRDM16-208ENST00000514189 ZCCHC13Q8WW36 166 aaKnown RBP7.71□□□□□ -1.18
PRDM16-208ENST00000514189 A0A1B0GU33 70 aa7.7□□□□□ -1.18
PRDM16-208ENST00000514189 COX6B2Q6YFQ2 88 aa7.67□□□□□ -1.18
PRDM16-208ENST00000514189 J3QL48 77 aa7.66□□□□□ -1.18
PRDM16-208ENST00000514189 ANK2Q01484 3957 aa7.66□□□□□ -1.18
PRDM16-208ENST00000514189 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
PRDM16-208ENST00000514189 CSAG1Q6PB30 78 aa7.63□□□□□ -1.19
PRDM16-208ENST00000514189 COL7A1Q02388 2944 aa7.59□□□□□ -1.19
PRDM16-208ENST00000514189 TRRAPQ9Y4A5 3859 aa7.58□□□□□ -1.2
PRDM16-208ENST00000514189 Q6ZR54 194 aa7.57□□□□□ -1.2
PRDM16-208ENST00000514189 Q6ZRN7 208 aaPredicted RBP7.56□□□□□ -1.2
PRDM16-208ENST00000514189 LINC00483Q53H64 154 aa7.56□□□□□ -1.2
PRDM16-208ENST00000514189 SPATA8Q6RVD6 105 aa7.54□□□□□ -1.2
PRDM16-208ENST00000514189 DMAC1Q96GE9 116 aa7.53□□□□□ -1.2
PRDM16-208ENST00000514189 CMYA5Q8N3K9 4069 aa7.53□□□□□ -1.2
PRDM16-208ENST00000514189 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
PRDM16-208ENST00000514189 Q6ZSA8 131 aa7.51□□□□□ -1.21
PRDM16-208ENST00000514189 LCE6AA0A183 80 aa7.48□□□□□ -1.21
PRDM16-208ENST00000514189 KRTAP21-3Q3LHN1 58 aa7.47□□□□□ -1.21
PRDM16-208ENST00000514189 KRTAP13-2Q52LG2 175 aa7.46□□□□□ -1.21
PRDM16-208ENST00000514189 KRTAP13-1Q8IUC0 172 aa7.45□□□□□ -1.22
PRDM16-208ENST00000514189 DNAH1Q9P2D7 4330 aa7.42□□□□□ -1.22
PRDM16-208ENST00000514189 MEGF8Q7Z7M0 2845 aa7.41□□□□□ -1.22
PRDM16-208ENST00000514189 H3BS24 57 aa7.4□□□□□ -1.22
PRDM16-208ENST00000514189 LYSTQ99698 3801 aa7.38□□□□□ -1.23
PRDM16-208ENST00000514189 CAMK2N1Q7Z7J9 78 aa7.38□□□□□ -1.23
PRDM16-208ENST00000514189 Q5VSD8 79 aa7.37□□□□□ -1.23
PRDM16-208ENST00000514189 DNAH3Q8TD57 4116 aa7.37□□□□□ -1.23
PRDM16-208ENST00000514189 S4R3F8 94 aa7.37□□□□□ -1.23
PRDM16-208ENST00000514189 CSMD3Q7Z407 3707 aa7.36□□□□□ -1.23
PRDM16-208ENST00000514189 A6NN06 94 aa7.34□□□□□ -1.23
PRDM16-208ENST00000514189 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
PRDM16-208ENST00000514189 RPL37P61927 97 aaKnown RBP7.32□□□□□ -1.24
PRDM16-208ENST00000514189 R4GN34 69 aa7.31□□□□□ -1.24
PRDM16-208ENST00000514189 M0R2T5 61 aa7.24□□□□□ -1.25
PRDM16-208ENST00000514189 DNAH10Q8IVF4 4471 aa7.23□□□□□ -1.25
PRDM16-208ENST00000514189 M0QZ58 72 aa7.22□□□□□ -1.25
PRDM16-208ENST00000514189 ROMO1P60602 79 aa7.21□□□□□ -1.25
PRDM16-208ENST00000514189 ASB16-AS1Q495Z4 193 aa7.2□□□□□ -1.26
PRDM16-208ENST00000514189 DNAH9Q9NYC9 4486 aa7.19□□□□□ -1.26
PRDM16-208ENST00000514189 DNAH7Q8WXX0 4024 aa7.19□□□□□ -1.26
PRDM16-208ENST00000514189 LUZP6Q538Z0 58 aa7.19□□□□□ -1.26
PRDM16-208ENST00000514189 KRTAP1-4P0C5Y4 121 aa7.12□□□□□ -1.27
PRDM16-208ENST00000514189 HUWE1Q7Z6Z7 4374 aaKnown RBP7.08□□□□□ -1.28
PRDM16-208ENST00000514189 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
PRDM16-208ENST00000514189 SEC61BP60468 96 aaKnown RBP7.04□□□□□ -1.28
PRDM16-208ENST00000514189 C10orf95Q9H7T3 257 aa7.01□□□□□ -1.29
PRDM16-208ENST00000514189 DYNC2H1Q8NCM8 4307 aaKnown RBP7□□□□□ -1.29
PRDM16-208ENST00000514189 A8MUU9 505 aa6.99□□□□□ -1.29
PRDM16-208ENST00000514189 NDUFAF8A1L188 74 aa6.96□□□□□ -1.29
PRDM16-208ENST00000514189 H0YAA0 97 aa6.96□□□□□ -1.29
PRDM16-208ENST00000514189 KRTAP16-1A8MUX0 517 aa6.95□□□□□ -1.3
PRDM16-208ENST00000514189 C20orf166-AS1Q96NR2 134 aa6.94□□□□□ -1.3
PRDM16-208ENST00000514189 RPS29P62273 56 aaKnown RBP6.94□□□□□ -1.3
PRDM16-208ENST00000514189 FRAS1Q86XX4 4008 aa6.93□□□□□ -1.3
PRDM16-208ENST00000514189 HECTD4Q9Y4D8 3996 aa6.91□□□□□ -1.3
PRDM16-208ENST00000514189 PLECQ15149 4684 aaKnown RBP6.89□□□□□ -1.31
PRDM16-208ENST00000514189 PRKDCP78527 4128 aaKnown RBP6.85□□□□□ -1.31
PRDM16-208ENST00000514189 KRTAP13-3Q3SY46 172 aa6.85□□□□□ -1.31
PRDM16-208ENST00000514189 P0C880 135 aa6.84□□□□□ -1.31
PRDM16-208ENST00000514189 XP32Q5T750 250 aa6.84□□□□□ -1.31
PRDM16-208ENST00000514189 DNAH2Q9P225 4427 aa6.82□□□□□ -1.32
PRDM16-208ENST00000514189 STARD9Q9P2P6 4700 aa6.8□□□□□ -1.32
PRDM16-208ENST00000514189 DNAH8Q96JB1 4490 aa6.79□□□□□ -1.32
PRDM16-208ENST00000514189 DNHD1Q96M86 4753 aa6.79□□□□□ -1.32
PRDM16-208ENST00000514189 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
PRDM16-208ENST00000514189 A0A0A0MQY5 61 aa6.77□□□□□ -1.33
PRDM16-208ENST00000514189 VPS13DQ5THJ4 4388 aa6.77□□□□□ -1.33
PRDM16-208ENST00000514189 A0A1B0GVY2 172 aa6.76□□□□□ -1.33
PRDM16-208ENST00000514189 DNAH17Q9UFH2 4485 aa6.74□□□□□ -1.33
PRDM16-208ENST00000514189 ALMS1Q8TCU4 4167 aa6.73□□□□□ -1.33
PRDM16-208ENST00000514189 PLAC4Q8WY50 150 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms