RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 BOD1L1Q8NFC6 3051 aa1.53□□□□□ -2.16
AFP-205ENST00000513720 UTRNP46939 3433 aa1.53□□□□□ -2.16
AFP-205ENST00000513720 C5orf42Q9H799 3197 aa1.53□□□□□ -2.17
AFP-205ENST00000513720 DMXL1Q9Y485 3027 aa1.53□□□□□ -2.17
AFP-205ENST00000513720 CHD9Q3L8U1 2897 aa1.53□□□□□ -2.17
AFP-205ENST00000513720 ZNF292O60281 2723 aa1.53□□□□□ -2.17
AFP-205ENST00000513720 MEGF8Q7Z7M0 2845 aa1.52□□□□□ -2.17
AFP-205ENST00000513720 M0R2T5 61 aa1.52□□□□□ -2.17
AFP-205ENST00000513720 LRBAP50851 2863 aa1.52□□□□□ -2.17
AFP-205ENST00000513720 DMDP11532 3685 aa1.52□□□□□ -2.17
AFP-205ENST00000513720 GOLGB1Q14789 3259 aaKnown RBP1.51□□□□□ -2.17
AFP-205ENST00000513720 WDFY4Q6ZS81 3184 aa1.51□□□□□ -2.17
AFP-205ENST00000513720 MYCBP2O75592 4640 aa1.51□□□□□ -2.17
AFP-205ENST00000513720 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
AFP-205ENST00000513720 LCE1AQ5T7P2 110 aa1.51□□□□□ -2.17
AFP-205ENST00000513720 SETD2Q9BYW2 2564 aaPredicted RBP1.5□□□□□ -2.17
AFP-205ENST00000513720 LRRK2Q5S007 2527 aa1.5□□□□□ -2.17
AFP-205ENST00000513720 HECTD1Q9ULT8 2610 aa1.5□□□□□ -2.17
AFP-205ENST00000513720 KALRNO60229 2985 aa1.5□□□□□ -2.17
AFP-205ENST00000513720 PIEZO1Q92508 2521 aa1.49□□□□□ -2.17
AFP-205ENST00000513720 TRIOO75962 3097 aa1.48□□□□□ -2.17
AFP-205ENST00000513720 KRTAP12-4P60329 112 aa1.48□□□□□ -2.17
AFP-205ENST00000513720 SZT2Q5T011 3432 aa1.48□□□□□ -2.17
AFP-205ENST00000513720 ITPR3Q14573 2671 aa1.48□□□□□ -2.17
AFP-205ENST00000513720 DOPEY1Q5JWR5 2465 aa1.47□□□□□ -2.17
AFP-205ENST00000513720 HTTP42858 3142 aa1.47□□□□□ -2.17
AFP-205ENST00000513720 PCNTO95613 3336 aa1.47□□□□□ -2.17
AFP-205ENST00000513720 MKI67P46013 3256 aaKnown RBP1.47□□□□□ -2.17
AFP-205ENST00000513720 CENPFP49454 3210 aa1.47□□□□□ -2.17
AFP-205ENST00000513720 KRTAP6-3Q3LI67 103 aa1.47□□□□□ -2.17
AFP-205ENST00000513720 COL7A1Q02388 2944 aa1.47□□□□□ -2.17
AFP-205ENST00000513720 SACSQ9NZJ4 4579 aa1.47□□□□□ -2.17
AFP-205ENST00000513720 CENPEQ02224 2701 aa1.46□□□□□ -2.17
AFP-205ENST00000513720 TEX15Q9BXT5 2789 aa1.46□□□□□ -2.18
AFP-205ENST00000513720 J3QKU1 62 aa1.46□□□□□ -2.18
AFP-205ENST00000513720 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.46□□□□□ -2.18
AFP-205ENST00000513720 FRYQ5TBA9 3013 aa1.46□□□□□ -2.18
AFP-205ENST00000513720 NF1P21359 2839 aa1.46□□□□□ -2.18
AFP-205ENST00000513720 SETXQ7Z333 2677 aaKnown RBP1.45□□□□□ -2.18
AFP-205ENST00000513720 SPTAN1Q13813 2472 aaKnown RBP1.45□□□□□ -2.18
AFP-205ENST00000513720 COL12A1Q99715 3063 aa1.45□□□□□ -2.18
AFP-205ENST00000513720 USP9YO00507 2555 aaPredicted RBP1.45□□□□□ -2.18
AFP-205ENST00000513720 USP9XQ93008 2570 aaPredicted RBP1.45□□□□□ -2.18
AFP-205ENST00000513720 EPG5Q9HCE0 2579 aa1.45□□□□□ -2.18
AFP-205ENST00000513720 SMR3AQ99954 134 aa1.45□□□□□ -2.18
AFP-205ENST00000513720 CACNA1AO00555 2505 aa1.45□□□□□ -2.18
AFP-205ENST00000513720 DNAH12Q6ZR08 3092 aa1.45□□□□□ -2.18
AFP-205ENST00000513720 LYSTQ99698 3801 aa1.45□□□□□ -2.18
AFP-205ENST00000513720 ACANP16112 2415 aa1.45□□□□□ -2.18
AFP-205ENST00000513720 TGP01266 2768 aa1.44□□□□□ -2.18
AFP-205ENST00000513720 CFAP46Q8IYW2 2715 aa1.44□□□□□ -2.18
AFP-205ENST00000513720 DCHS1Q96JQ0 3298 aa1.44□□□□□ -2.18
AFP-205ENST00000513720 LCE1EQ5T753 118 aa1.44□□□□□ -2.18
AFP-205ENST00000513720 TLN1Q9Y490 2541 aaKnown RBP1.44□□□□□ -2.18
AFP-205ENST00000513720 FRAS1Q86XX4 4008 aa1.44□□□□□ -2.18
AFP-205ENST00000513720 UTP20O75691 2785 aaKnown RBP1.44□□□□□ -2.18
AFP-205ENST00000513720 EP400Q96L91 3159 aa1.44□□□□□ -2.18
AFP-205ENST00000513720 DNAH3Q8TD57 4116 aa1.44□□□□□ -2.18
AFP-205ENST00000513720 DNAH8Q96JB1 4490 aa1.44□□□□□ -2.18
AFP-205ENST00000513720 DCHS2Q6V1P9 2916 aa1.43□□□□□ -2.18
AFP-205ENST00000513720 USP24Q9UPU5 2620 aa1.43□□□□□ -2.18
AFP-205ENST00000513720 APCP25054 2843 aa1.43□□□□□ -2.18
AFP-205ENST00000513720 SPEGQ15772 3267 aa1.42□□□□□ -2.18
AFP-205ENST00000513720 LCE3CQ5T5A8 94 aa1.42□□□□□ -2.18
AFP-205ENST00000513720 VPS13BQ7Z7G8 4022 aa1.42□□□□□ -2.18
AFP-205ENST00000513720 CMYA5Q8N3K9 4069 aa1.41□□□□□ -2.18
AFP-205ENST00000513720 NIPBLQ6KC79 2804 aaeCLIP1.41□□□□□ -2.18
AFP-205ENST00000513720 LAMA1P25391 3075 aa1.41□□□□□ -2.18
AFP-205ENST00000513720 DNAH2Q9P225 4427 aa1.41□□□□□ -2.18
AFP-205ENST00000513720 SPENQ96T58 3664 aaKnown RBP1.41□□□□□ -2.18
AFP-205ENST00000513720 HELZ2Q9BYK8 2649 aaKnown RBP1.41□□□□□ -2.18
AFP-205ENST00000513720 LAMA2P24043 3122 aaKnown RBP1.41□□□□□ -2.18
AFP-205ENST00000513720 ATMQ13315 3056 aa1.41□□□□□ -2.18
AFP-205ENST00000513720 RELNP78509 3460 aa1.41□□□□□ -2.18
AFP-205ENST00000513720 DYNC2H1Q8NCM8 4307 aaKnown RBP1.4□□□□□ -2.19
AFP-205ENST00000513720 DNAH7Q8WXX0 4024 aa1.4□□□□□ -2.19
AFP-205ENST00000513720 USP34Q70CQ2 3546 aa1.39□□□□□ -2.19
AFP-205ENST00000513720 CHD8Q9HCK8 2581 aa1.39□□□□□ -2.19
AFP-205ENST00000513720 BDP1A6H8Y1 2624 aa1.39□□□□□ -2.19
AFP-205ENST00000513720 SMG1Q96Q15 3661 aaKnown RBP1.39□□□□□ -2.19
AFP-205ENST00000513720 LAMA5O15230 3695 aa1.38□□□□□ -2.19
AFP-205ENST00000513720 KMT2AQ03164 3969 aa1.38□□□□□ -2.19
AFP-205ENST00000513720 KRTAP2-3P0C7H8 128 aa1.38□□□□□ -2.19
AFP-205ENST00000513720 KRTAP10-12P60413 245 aa1.38□□□□□ -2.19
AFP-205ENST00000513720 LCE3AQ5TA76 89 aa1.38□□□□□ -2.19
AFP-205ENST00000513720 KRTAP8-1Q8IUC2 63 aa1.38□□□□□ -2.19
AFP-205ENST00000513720 KRTAP2-4Q9BYR9 128 aa1.38□□□□□ -2.19
AFP-205ENST00000513720 KRTAP2-1Q9BYU5 128 aa1.38□□□□□ -2.19
AFP-205ENST00000513720 PRKDCP78527 4128 aaKnown RBP1.38□□□□□ -2.19
AFP-205ENST00000513720 TLN2Q9Y4G6 2542 aa1.37□□□□□ -2.19
AFP-205ENST00000513720 DNAH10Q8IVF4 4471 aa1.37□□□□□ -2.19
AFP-205ENST00000513720 PDZD2O15018 2839 aa1.37□□□□□ -2.19
AFP-205ENST00000513720 POLQO75417 2590 aa1.37□□□□□ -2.19
AFP-205ENST00000513720 NOTCH1P46531 2555 aa1.37□□□□□ -2.19
AFP-205ENST00000513720 KRTAP10-7P60409 375 aaPredicted RBP1.37□□□□□ -2.19
AFP-205ENST00000513720 ATRQ13535 2644 aa1.37□□□□□ -2.19
AFP-205ENST00000513720 FREM2Q5SZK8 3169 aa1.37□□□□□ -2.19
AFP-205ENST00000513720 CSMD3Q7Z407 3707 aa1.37□□□□□ -2.19
AFP-205ENST00000513720 CELSR3Q9NYQ7 3312 aa1.37□□□□□ -2.19
AFP-205ENST00000513720 MTORP42345 2549 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms