RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 IGLV8-61A0A075B6I0 122 aa4.99□□□□□ -1.61
NUP54-211ENST00000512151 PCOTHQ58A44 107 aa4.99□□□□□ -1.61
NUP54-211ENST00000512151 ST20-AS1Q8NBB2 130 aa4.99□□□□□ -1.61
NUP54-211ENST00000512151 C14orf132Q9NPU4 83 aa4.99□□□□□ -1.61
NUP54-211ENST00000512151 MACF1Q9UPN3 7388 aaKnown RBP4.99□□□□□ -1.61
NUP54-211ENST00000512151 TRBV7-7A0A0K0K1E9 115 aa4.98□□□□□ -1.61
NUP54-211ENST00000512151 CCKP06307 115 aa4.98□□□□□ -1.61
NUP54-211ENST00000512151 GAGE2AQ6NT46 116 aa4.98□□□□□ -1.61
NUP54-211ENST00000512151 SPAG11AQ6PDA7 123 aa4.98□□□□□ -1.61
NUP54-211ENST00000512151 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.98□□□□□ -1.61
NUP54-211ENST00000512151 LINC00643Q86TS7 51 aa4.98□□□□□ -1.61
NUP54-211ENST00000512151 SPRR4Q96PI1 79 aa4.97□□□□□ -1.61
NUP54-211ENST00000512151 DHRS4-AS1Q9P1J3 65 aa4.97□□□□□ -1.61
NUP54-211ENST00000512151 Q6ZQY7 126 aa4.96□□□□□ -1.62
NUP54-211ENST00000512151 LOC110117498A0A087WWA1 95 aa4.95□□□□□ -1.62
NUP54-211ENST00000512151 A0A1B0GV72 72 aa4.94□□□□□ -1.62
NUP54-211ENST00000512151 RBM3P98179 157 aaKnown RBP4.94□□□□□ -1.62
NUP54-211ENST00000512151 SPRR1BP22528 89 aa4.93□□□□□ -1.62
NUP54-211ENST00000512151 LINC00483Q53H64 154 aa4.93□□□□□ -1.62
NUP54-211ENST00000512151 Q6JHZ5 121 aa4.93□□□□□ -1.62
NUP54-211ENST00000512151 Q6ZQT0 140 aa4.93□□□□□ -1.62
NUP54-211ENST00000512151 Q8N377 158 aa4.93□□□□□ -1.62
NUP54-211ENST00000512151 Q8NBF4 154 aa4.93□□□□□ -1.62
NUP54-211ENST00000512151 DEFB105AQ8NG35 78 aa4.93□□□□□ -1.62
NUP54-211ENST00000512151 LINC00846Q9NV44 126 aa4.93□□□□□ -1.62
NUP54-211ENST00000512151 IGLV5-48A0A075B6I7 105 aa4.92□□□□□ -1.62
NUP54-211ENST00000512151 A0A1B0GW54 56 aa4.92□□□□□ -1.62
NUP54-211ENST00000512151 NDUFV3P56181 108 aaKnown RBP4.92□□□□□ -1.62
NUP54-211ENST00000512151 ATP5EP2Q5VTU8 51 aa4.92□□□□□ -1.62
NUP54-211ENST00000512151 SMIM29Q86T20 159 aa4.92□□□□□ -1.62
NUP54-211ENST00000512151 LAMTOR3Q9UHA4 124 aa4.92□□□□□ -1.62
NUP54-211ENST00000512151 ZNF706Q9Y5V0 76 aaPredicted RBP4.92□□□□□ -1.62
NUP54-211ENST00000512151 TRBV7-4A0A0J9YYF1 115 aa4.91□□□□□ -1.62
NUP54-211ENST00000512151 COX6B2Q6YFQ2 88 aa4.91□□□□□ -1.62
NUP54-211ENST00000512151 DSCR8Q96T75 97 aa4.91□□□□□ -1.62
NUP54-211ENST00000512151 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
NUP54-211ENST00000512151 ANAPC13Q9BS18 74 aa4.9□□□□□ -1.63
NUP54-211ENST00000512151 IGLV9-49A0A0B4J1Y8 123 aa4.89□□□□□ -1.63
NUP54-211ENST00000512151 SPINK1P00995 79 aa4.89□□□□□ -1.63
NUP54-211ENST00000512151 UBL5Q9BZL1 73 aa4.88□□□□□ -1.63
NUP54-211ENST00000512151 HIST1H4AP62805 103 aaKnown RBP4.87□□□□□ -1.63
NUP54-211ENST00000512151 IGKV3D-7A0A0C4DH55 119 aa4.86□□□□□ -1.63
NUP54-211ENST00000512151 A0A0G2JQZ4 141 aa4.86□□□□□ -1.63
NUP54-211ENST00000512151 FAM236AA0A1B0GUQ0 79 aa4.86□□□□□ -1.63
NUP54-211ENST00000512151 FAM236BA0A1B0GV22 79 aa4.86□□□□□ -1.63
NUP54-211ENST00000512151 MOBPQ13875 183 aa4.86□□□□□ -1.63
NUP54-211ENST00000512151 C9orf153Q5TBE3 101 aa4.84□□□□□ -1.63
NUP54-211ENST00000512151 Q6ZVQ6 151 aa4.84□□□□□ -1.63
NUP54-211ENST00000512151 SSBP3-AS1Q7Z2R9 100 aa4.84□□□□□ -1.63
NUP54-211ENST00000512151 NEBP20929 6669 aa4.83□□□□□ -1.64
NUP54-211ENST00000512151 C9orf92A6NGG3 77 aa4.83□□□□□ -1.64
NUP54-211ENST00000512151 CXCL6P80162 114 aa4.83□□□□□ -1.64
NUP54-211ENST00000512151 ATOX1O00244 68 aa4.82□□□□□ -1.64
NUP54-211ENST00000512151 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
NUP54-211ENST00000512151 IGFL1Q6UW32 110 aa4.81□□□□□ -1.64
NUP54-211ENST00000512151 A0A087WVE0 104 aa4.8□□□□□ -1.64
NUP54-211ENST00000512151 CCDC179H3BU77 68 aa4.8□□□□□ -1.64
NUP54-211ENST00000512151 F8WEM9 126 aa4.79□□□□□ -1.64
NUP54-211ENST00000512151 MT2AP02795 61 aa4.79□□□□□ -1.64
NUP54-211ENST00000512151 KRTAP20-1Q3LI63 56 aa4.79□□□□□ -1.64
NUP54-211ENST00000512151 HRCT1Q6UXD1 115 aa4.79□□□□□ -1.64
NUP54-211ENST00000512151 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.64
NUP54-211ENST00000512151 SMIM20Q8N5G0 67 aa4.78□□□□□ -1.64
NUP54-211ENST00000512151 A0A1W2PNM2 257 aa4.78□□□□□ -1.64
NUP54-211ENST00000512151 UQCRQO14949 82 aa4.78□□□□□ -1.64
NUP54-211ENST00000512151 MT1FP04733 61 aa4.78□□□□□ -1.64
NUP54-211ENST00000512151 COX7CP15954 63 aa4.78□□□□□ -1.64
NUP54-211ENST00000512151 NREPQ16612 68 aa4.77□□□□□ -1.65
NUP54-211ENST00000512151 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
NUP54-211ENST00000512151 CD164Q04900 197 aa4.76□□□□□ -1.65
NUP54-211ENST00000512151 SERP2Q8N6R1 65 aa4.76□□□□□ -1.65
NUP54-211ENST00000512151 BPY2O14599 106 aa4.73□□□□□ -1.65
NUP54-211ENST00000512151 IGKV4-1P06312 121 aa4.72□□□□□ -1.65
NUP54-211ENST00000512151 RPL37P61927 97 aaKnown RBP4.72□□□□□ -1.65
NUP54-211ENST00000512151 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.71□□□□□ -1.66
NUP54-211ENST00000512151 TRAV7A0A075B6U4 112 aa4.7□□□□□ -1.66
NUP54-211ENST00000512151 A0A087WSZ3 146 aa4.7□□□□□ -1.66
NUP54-211ENST00000512151 Q5XG85 94 aa4.7□□□□□ -1.66
NUP54-211ENST00000512151 LIMD2Q9BT23 127 aa4.69□□□□□ -1.66
NUP54-211ENST00000512151 C1orf195Q5TG92 126 aa4.68□□□□□ -1.66
NUP54-211ENST00000512151 DSCR10P59022 87 aa4.67□□□□□ -1.66
NUP54-211ENST00000512151 Q8N9L7 120 aa4.67□□□□□ -1.66
NUP54-211ENST00000512151 Q96NJ1 140 aa4.67□□□□□ -1.66
NUP54-211ENST00000512151 SS18L2Q9UHA2 77 aa4.67□□□□□ -1.66
NUP54-211ENST00000512151 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
NUP54-211ENST00000512151 J3KT08 172 aa4.65□□□□□ -1.67
NUP54-211ENST00000512151 NDUFC1O43677 76 aa4.65□□□□□ -1.67
NUP54-211ENST00000512151 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.67
NUP54-211ENST00000512151 TMEM258P61165 79 aa4.64□□□□□ -1.67
NUP54-211ENST00000512151 DEFB116Q30KQ4 102 aa4.64□□□□□ -1.67
NUP54-211ENST00000512151 OCR1Q9BZK8 76 aa4.64□□□□□ -1.67
NUP54-211ENST00000512151 LINC00472Q9H8W2 130 aa4.64□□□□□ -1.67
NUP54-211ENST00000512151 K7EQZ3 153 aa4.63□□□□□ -1.67
NUP54-211ENST00000512151 KLKP1Q107X0 134 aa4.63□□□□□ -1.67
NUP54-211ENST00000512151 C20orf197Q8N268 126 aa4.63□□□□□ -1.67
NUP54-211ENST00000512151 RPS28P62857 69 aaKnown RBP4.61□□□□□ -1.67
NUP54-211ENST00000512151 HCG22E2RYF7 251 aa4.6□□□□□ -1.67
NUP54-211ENST00000512151 A8MWP4 228 aa4.59□□□□□ -1.67
NUP54-211ENST00000512151 H7BZZ5 65 aa4.59□□□□□ -1.67
NUP54-211ENST00000512151 ATP5EP56381 51 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 8898.4 ms