RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 A0A1B0GVX0 72 aa6.8□□□□□ -1.32
RNF4-215ENST00000511843 Q6ZQT0 140 aa6.8□□□□□ -1.32
RNF4-215ENST00000511843 C14orf132Q9NPU4 83 aa6.78□□□□□ -1.32
RNF4-215ENST00000511843 LOC110117498A0A087WWA1 95 aa6.76□□□□□ -1.33
RNF4-215ENST00000511843 JMJD7-PLA2G4BH0Y9G9 81 aa6.76□□□□□ -1.33
RNF4-215ENST00000511843 TRBV20-1A0A075B6N2 111 aa6.75□□□□□ -1.33
RNF4-215ENST00000511843 C8orf87E5RJ46 101 aa6.75□□□□□ -1.33
RNF4-215ENST00000511843 LYRM7Q5U5X0 104 aa6.75□□□□□ -1.33
RNF4-215ENST00000511843 MTURNQ8N3F0 131 aa6.75□□□□□ -1.33
RNF4-215ENST00000511843 J3KT08 172 aa6.74□□□□□ -1.33
RNF4-215ENST00000511843 TAX1BP3O14907 124 aa6.73□□□□□ -1.33
RNF4-215ENST00000511843 C9orf118A6NHY6 69 aa6.72□□□□□ -1.33
RNF4-215ENST00000511843 C21orf62-AS1Q17RA5 79 aa6.72□□□□□ -1.33
RNF4-215ENST00000511843 A0A1W2PPM0 123 aa6.7□□□□□ -1.34
RNF4-215ENST00000511843 HRES1P13985 223 aa6.7□□□□□ -1.34
RNF4-215ENST00000511843 IGKV3D-7A0A0C4DH55 119 aa6.69□□□□□ -1.34
RNF4-215ENST00000511843 FAM236DA0A1B0GTK5 79 aa6.69□□□□□ -1.34
RNF4-215ENST00000511843 NDUFB1O75438 58 aa6.69□□□□□ -1.34
RNF4-215ENST00000511843 FAM236CP0DP71 79 aa6.69□□□□□ -1.34
RNF4-215ENST00000511843 PDE6GP18545 87 aa6.69□□□□□ -1.34
RNF4-215ENST00000511843 C8orf17Q9NRJ1 99 aa6.69□□□□□ -1.34
RNF4-215ENST00000511843 CRCT1Q9UGL9 99 aa6.69□□□□□ -1.34
RNF4-215ENST00000511843 A8MWP4 228 aa6.68□□□□□ -1.34
RNF4-215ENST00000511843 MPLKIPQ8TAP9 179 aa6.67□□□□□ -1.34
RNF4-215ENST00000511843 ZCCHC13Q8WW36 166 aaKnown RBP6.67□□□□□ -1.34
RNF4-215ENST00000511843 A0A1B0GW54 56 aa6.66□□□□□ -1.34
RNF4-215ENST00000511843 H3BT86 120 aa6.66□□□□□ -1.34
RNF4-215ENST00000511843 NREPQ16612 68 aa6.66□□□□□ -1.34
RNF4-215ENST00000511843 Q8N9P0 234 aaPredicted RBP6.65□□□□□ -1.34
RNF4-215ENST00000511843 RBM12B-AS1Q9P1G2 102 aa6.64□□□□□ -1.35
RNF4-215ENST00000511843 SPINK7P58062 85 aa6.62□□□□□ -1.35
RNF4-215ENST00000511843 Q6ZVQ6 151 aa6.62□□□□□ -1.35
RNF4-215ENST00000511843 PRR15Q8IV56 129 aa6.62□□□□□ -1.35
RNF4-215ENST00000511843 KRTAP9-8Q9BYQ0 159 aa6.62□□□□□ -1.35
RNF4-215ENST00000511843 SPCS1Q9Y6A9 102 aa6.61□□□□□ -1.35
RNF4-215ENST00000511843 MMP24-AS1A0A0U1RRL7 71 aa6.6□□□□□ -1.35
RNF4-215ENST00000511843 K7EQZ3 153 aa6.6□□□□□ -1.35
RNF4-215ENST00000511843 SMCPP49901 116 aaPredicted RBP6.59□□□□□ -1.35
RNF4-215ENST00000511843 MRPL34Q9BQ48 92 aaKnown RBP6.56□□□□□ -1.36
RNF4-215ENST00000511843 KRTAP3-3Q9BYR6 98 aa6.56□□□□□ -1.36
RNF4-215ENST00000511843 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
RNF4-215ENST00000511843 BPY2O14599 106 aa6.55□□□□□ -1.36
RNF4-215ENST00000511843 MT2AP02795 61 aa6.55□□□□□ -1.36
RNF4-215ENST00000511843 TMEM254Q8TBM7 123 aa6.55□□□□□ -1.36
RNF4-215ENST00000511843 hDV103S1A0JD37 113 aa6.54□□□□□ -1.36
RNF4-215ENST00000511843 COL5A1-AS1Q5SY13 56 aa6.54□□□□□ -1.36
RNF4-215ENST00000511843 WFDC13Q8IUB5 93 aa6.54□□□□□ -1.36
RNF4-215ENST00000511843 Q8N9L7 120 aa6.54□□□□□ -1.36
RNF4-215ENST00000511843 NDUFS5O43920 106 aa6.53□□□□□ -1.36
RNF4-215ENST00000511843 PRO0461Q9UI25 63 aa6.52□□□□□ -1.37
RNF4-215ENST00000511843 K7EP34 96 aa6.5□□□□□ -1.37
RNF4-215ENST00000511843 MT1FP04733 61 aa6.5□□□□□ -1.37
RNF4-215ENST00000511843 USH2AO75445 5202 aa6.48□□□□□ -1.37
RNF4-215ENST00000511843 Q5W150 140 aa6.47□□□□□ -1.37
RNF4-215ENST00000511843 LINC00846Q9NV44 126 aa6.47□□□□□ -1.37
RNF4-215ENST00000511843 PCP4L1A6NKN8 68 aa6.46□□□□□ -1.38
RNF4-215ENST00000511843 CASC2Q6XLA1 102 aa6.46□□□□□ -1.38
RNF4-215ENST00000511843 IGKV2D-30A0A075B6S6 120 aa6.45□□□□□ -1.38
RNF4-215ENST00000511843 IGKV2-30P06310 120 aa6.45□□□□□ -1.38
RNF4-215ENST00000511843 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
RNF4-215ENST00000511843 HCG22E2RYF7 251 aa6.43□□□□□ -1.38
RNF4-215ENST00000511843 SSPOA2VEC9 5147 aa6.41□□□□□ -1.38
RNF4-215ENST00000511843 UBL5Q9BZL1 73 aa6.41□□□□□ -1.38
RNF4-215ENST00000511843 LCE2BO14633 110 aa6.4□□□□□ -1.38
RNF4-215ENST00000511843 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.38
RNF4-215ENST00000511843 C7orf65Q6ZTY9 151 aa6.38□□□□□ -1.39
RNF4-215ENST00000511843 GTF2H5Q6ZYL4 71 aa6.38□□□□□ -1.39
RNF4-215ENST00000511843 ETDBQ3ZM63 59 aa6.37□□□□□ -1.39
RNF4-215ENST00000511843 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
RNF4-215ENST00000511843 CXCL6P80162 114 aa6.34□□□□□ -1.39
RNF4-215ENST00000511843 F8W1H4 67 aa6.33□□□□□ -1.4
RNF4-215ENST00000511843 C4orf26Q17RF5 130 aa6.33□□□□□ -1.4
RNF4-215ENST00000511843 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
RNF4-215ENST00000511843 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
RNF4-215ENST00000511843 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
RNF4-215ENST00000511843 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
RNF4-215ENST00000511843 C5orf47Q569G3 176 aa6.21□□□□□ -1.42
RNF4-215ENST00000511843 TP53AIP1Q9HCN2 124 aa6.2□□□□□ -1.42
RNF4-215ENST00000511843 C1orf64Q8NEQ6 169 aa6.19□□□□□ -1.42
RNF4-215ENST00000511843 S4R3F8 94 aa6.17□□□□□ -1.42
RNF4-215ENST00000511843 KRTAP9-7A8MTY7 169 aa6.15□□□□□ -1.42
RNF4-215ENST00000511843 ACYP1P07311 99 aa6.15□□□□□ -1.42
RNF4-215ENST00000511843 LCA10Q71F78 164 aa6.14□□□□□ -1.43
RNF4-215ENST00000511843 FAM240AA0A1B0GVK7 77 aa6.13□□□□□ -1.43
RNF4-215ENST00000511843 HIST1H4AP62805 103 aaKnown RBP6.13□□□□□ -1.43
RNF4-215ENST00000511843 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
RNF4-215ENST00000511843 TRAV22A0A0B4J277 110 aa6.12□□□□□ -1.43
RNF4-215ENST00000511843 CYP4F30PQ9H0H9 118 aa6.12□□□□□ -1.43
RNF4-215ENST00000511843 MACF1Q9UPN3 7388 aaKnown RBP6.1□□□□□ -1.43
RNF4-215ENST00000511843 FAM236AA0A1B0GUQ0 79 aa6.1□□□□□ -1.43
RNF4-215ENST00000511843 FAM236BA0A1B0GV22 79 aa6.1□□□□□ -1.43
RNF4-215ENST00000511843 A0A1B0GV90 55 aa6.1□□□□□ -1.43
RNF4-215ENST00000511843 ATP5EP2Q5VTU8 51 aa6.1□□□□□ -1.43
RNF4-215ENST00000511843 A0A087WVE0 104 aa6.09□□□□□ -1.43
RNF4-215ENST00000511843 CSAG1Q6PB30 78 aa6.08□□□□□ -1.44
RNF4-215ENST00000511843 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
RNF4-215ENST00000511843 H0Y9P7 68 aa6.05□□□□□ -1.44
RNF4-215ENST00000511843 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
RNF4-215ENST00000511843 UQCRQO14949 82 aa6.03□□□□□ -1.44
RNF4-215ENST00000511843 LINC00643Q86TS7 51 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms