RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 WDR87Q6ZQQ6 2873 aa0.87□□□□□ -2.27
HMGB3P3-201ENST00000510526 REV3LO60673 3130 aa0.86□□□□□ -2.27
HMGB3P3-201ENST00000510526 POLQO75417 2590 aa0.86□□□□□ -2.27
HMGB3P3-201ENST00000510526 A0A0C4DFX4 3053 aa0.86□□□□□ -2.27
HMGB3P3-201ENST00000510526 SONP18583 2426 aaKnown RBP0.86□□□□□ -2.27
HMGB3P3-201ENST00000510526 SRRM2Q9UQ35 2752 aaKnown RBP0.85□□□□□ -2.27
HMGB3P3-201ENST00000510526 ZNF292O60281 2723 aa0.85□□□□□ -2.27
HMGB3P3-201ENST00000510526 BDP1A6H8Y1 2624 aa0.85□□□□□ -2.27
HMGB3P3-201ENST00000510526 KRTAP12-3P60328 96 aa0.85□□□□□ -2.27
HMGB3P3-201ENST00000510526 CACNA1AO00555 2505 aa0.85□□□□□ -2.27
HMGB3P3-201ENST00000510526 PTPN13Q12923 2485 aa0.84□□□□□ -2.27
HMGB3P3-201ENST00000510526 TENM2Q9NT68 2774 aa0.84□□□□□ -2.27
HMGB3P3-201ENST00000510526 USP24Q9UPU5 2620 aa0.84□□□□□ -2.27
HMGB3P3-201ENST00000510526 ACANP16112 2415 aa0.84□□□□□ -2.28
HMGB3P3-201ENST00000510526 MTORP42345 2549 aa0.83□□□□□ -2.28
HMGB3P3-201ENST00000510526 SPG11Q96JI7 2443 aa0.83□□□□□ -2.28
HMGB3P3-201ENST00000510526 KRTAP6-3Q3LI67 103 aa0.83□□□□□ -2.28
HMGB3P3-201ENST00000510526 PRRC2CQ9Y520 2896 aaKnown RBP0.83□□□□□ -2.28
HMGB3P3-201ENST00000510526 PIEZO1Q92508 2521 aa0.83□□□□□ -2.28
HMGB3P3-201ENST00000510526 CHD8Q9HCK8 2581 aa0.83□□□□□ -2.28
HMGB3P3-201ENST00000510526 MGAQ8IWI9 3026 aa0.82□□□□□ -2.28
HMGB3P3-201ENST00000510526 HELZ2Q9BYK8 2649 aaKnown RBP0.82□□□□□ -2.28
HMGB3P3-201ENST00000510526 ATRQ13535 2644 aa0.81□□□□□ -2.28
HMGB3P3-201ENST00000510526 CHD7Q9P2D1 2997 aa0.81□□□□□ -2.28
HMGB3P3-201ENST00000510526 AKAP13Q12802 2813 aa0.8□□□□□ -2.28
HMGB3P3-201ENST00000510526 USP9YO00507 2555 aaPredicted RBP0.8□□□□□ -2.28
HMGB3P3-201ENST00000510526 U3KQA8 63 aa0.8□□□□□ -2.28
HMGB3P3-201ENST00000510526 ASH1LQ9NR48 2969 aaKnown RBP0.8□□□□□ -2.28
HMGB3P3-201ENST00000510526 VWFP04275 2813 aa0.79□□□□□ -2.28
HMGB3P3-201ENST00000510526 MAP1AP78559 2803 aaPredicted RBP0.79□□□□□ -2.28
HMGB3P3-201ENST00000510526 TNRC18O15417 2968 aaPredicted RBP0.79□□□□□ -2.28
HMGB3P3-201ENST00000510526 FCGBPQ9Y6R7 5405 aaPredicted RBP0.79□□□□□ -2.28
HMGB3P3-201ENST00000510526 UTP20O75691 2785 aaKnown RBP0.79□□□□□ -2.28
HMGB3P3-201ENST00000510526 ZFYVE26Q68DK2 2539 aa0.78□□□□□ -2.28
HMGB3P3-201ENST00000510526 TLN1Q9Y490 2541 aaKnown RBP0.78□□□□□ -2.28
HMGB3P3-201ENST00000510526 CENPEQ02224 2701 aa0.78□□□□□ -2.28
HMGB3P3-201ENST00000510526 DEFB4AO15263 64 aa0.78□□□□□ -2.28
HMGB3P3-201ENST00000510526 KRTAP2-3P0C7H8 128 aa0.78□□□□□ -2.28
HMGB3P3-201ENST00000510526 KRTAP8-1Q8IUC2 63 aa0.78□□□□□ -2.28
HMGB3P3-201ENST00000510526 KRTAP2-4Q9BYR9 128 aa0.78□□□□□ -2.28
HMGB3P3-201ENST00000510526 KRTAP2-1Q9BYU5 128 aa0.78□□□□□ -2.28
HMGB3P3-201ENST00000510526 CFAP46Q8IYW2 2715 aa0.78□□□□□ -2.29
HMGB3P3-201ENST00000510526 ITPR1Q14643 2758 aa0.78□□□□□ -2.29
HMGB3P3-201ENST00000510526 TENM4Q6N022 2769 aa0.78□□□□□ -2.29
HMGB3P3-201ENST00000510526 CRYBG3Q68DQ2 2970 aa0.78□□□□□ -2.29
HMGB3P3-201ENST00000510526 FBN3Q75N90 2809 aa0.77□□□□□ -2.29
HMGB3P3-201ENST00000510526 KRTAP10-4P60372 401 aaPredicted RBP0.77□□□□□ -2.29
HMGB3P3-201ENST00000510526 OTOGQ6ZRI0 2925 aa0.76□□□□□ -2.29
HMGB3P3-201ENST00000510526 SPTAN1Q13813 2472 aaKnown RBP0.76□□□□□ -2.29
HMGB3P3-201ENST00000510526 FLNCQ14315 2725 aa0.76□□□□□ -2.29
HMGB3P3-201ENST00000510526 DOPEY1Q5JWR5 2465 aa0.76□□□□□ -2.29
HMGB3P3-201ENST00000510526 SMR3AQ99954 134 aa0.75□□□□□ -2.29
HMGB3P3-201ENST00000510526 ITPR3Q14573 2671 aa0.75□□□□□ -2.29
HMGB3P3-201ENST00000510526 SETXQ7Z333 2677 aaKnown RBP0.75□□□□□ -2.29
HMGB3P3-201ENST00000510526 NOTCH1P46531 2555 aa0.74□□□□□ -2.29
HMGB3P3-201ENST00000510526 APCP25054 2843 aa0.74□□□□□ -2.29
HMGB3P3-201ENST00000510526 GCN1Q92616 2671 aaKnown RBP0.74□□□□□ -2.29
HMGB3P3-201ENST00000510526 MYO18BQ8IUG5 2567 aa0.74□□□□□ -2.29
HMGB3P3-201ENST00000510526 TGP01266 2768 aa0.74□□□□□ -2.29
HMGB3P3-201ENST00000510526 CHD9Q3L8U1 2897 aa0.73□□□□□ -2.29
HMGB3P3-201ENST00000510526 NIPBLQ6KC79 2804 aaeCLIP0.73□□□□□ -2.29
HMGB3P3-201ENST00000510526 NSD1Q96L73 2696 aaPredicted RBP0.73□□□□□ -2.29
HMGB3P3-201ENST00000510526 TLN2Q9Y4G6 2542 aa0.73□□□□□ -2.29
HMGB3P3-201ENST00000510526 ACACBO00763 2458 aa0.73□□□□□ -2.29
HMGB3P3-201ENST00000510526 USP9XQ93008 2570 aaPredicted RBP0.72□□□□□ -2.29
HMGB3P3-201ENST00000510526 CELSR1Q9NYQ6 3014 aa0.72□□□□□ -2.29
HMGB3P3-201ENST00000510526 FRYLO94915 3013 aa0.72□□□□□ -2.29
HMGB3P3-201ENST00000510526 CEP350Q5VT06 3117 aa0.71□□□□□ -2.3
HMGB3P3-201ENST00000510526 STAB1Q9NY15 2570 aa0.71□□□□□ -2.3
HMGB3P3-201ENST00000510526 FASNP49327 2511 aaKnown RBP0.71□□□□□ -2.3
HMGB3P3-201ENST00000510526 UNC79Q9P2D8 2635 aa0.71□□□□□ -2.3
HMGB3P3-201ENST00000510526 TEX15Q9BXT5 2789 aa0.71□□□□□ -2.3
HMGB3P3-201ENST00000510526 NBEAL1Q6ZS30 2694 aa0.71□□□□□ -2.3
HMGB3P3-201ENST00000510526 NF1P21359 2839 aa0.7□□□□□ -2.3
HMGB3P3-201ENST00000510526 CEP295Q9C0D2 2601 aa0.7□□□□□ -2.3
HMGB3P3-201ENST00000510526 STAB2Q8WWQ8 2551 aa0.69□□□□□ -2.3
HMGB3P3-201ENST00000510526 MYO9AB2RTY4 2548 aa0.69□□□□□ -2.3
HMGB3P3-201ENST00000510526 ANKRD11Q6UB99 2663 aaPredicted RBP0.69□□□□□ -2.3
HMGB3P3-201ENST00000510526 NBEAL2Q6ZNJ1 2754 aa0.69□□□□□ -2.3
HMGB3P3-201ENST00000510526 SRCAPQ6ZRS2 3230 aa0.69□□□□□ -2.3
HMGB3P3-201ENST00000510526 FLNAP21333 2647 aaKnown RBP0.68□□□□□ -2.3
HMGB3P3-201ENST00000510526 COL7A1Q02388 2944 aa0.68□□□□□ -2.3
HMGB3P3-201ENST00000510526 LRBAP50851 2863 aa0.68□□□□□ -2.3
HMGB3P3-201ENST00000510526 ITPR2Q14571 2701 aa0.67□□□□□ -2.3
HMGB3P3-201ENST00000510526 TENM1Q9UKZ4 2725 aa0.67□□□□□ -2.3
HMGB3P3-201ENST00000510526 PKD1L1Q8TDX9 2849 aa0.67□□□□□ -2.3
HMGB3P3-201ENST00000510526 TEP1Q99973 2627 aaKnown RBP0.67□□□□□ -2.3
HMGB3P3-201ENST00000510526 PRM1P04553 51 aa0.67□□□□□ -2.3
HMGB3P3-201ENST00000510526 TRIOO75962 3097 aa0.67□□□□□ -2.3
HMGB3P3-201ENST00000510526 PRUNE2Q8WUY3 3088 aa0.67□□□□□ -2.3
HMGB3P3-201ENST00000510526 COL12A1Q99715 3063 aa0.67□□□□□ -2.3
HMGB3P3-201ENST00000510526 FLNBO75369 2602 aaKnown RBP0.67□□□□□ -2.3
HMGB3P3-201ENST00000510526 HIVEP1P15822 2718 aa0.66□□□□□ -2.3
HMGB3P3-201ENST00000510526 NBEAQ8NFP9 2946 aa0.66□□□□□ -2.3
HMGB3P3-201ENST00000510526 FRYQ5TBA9 3013 aa0.66□□□□□ -2.3
HMGB3P3-201ENST00000510526 MGAM2Q2M2H8 2515 aa0.66□□□□□ -2.3
HMGB3P3-201ENST00000510526 ZZEF1O43149 2961 aa0.66□□□□□ -2.3
HMGB3P3-201ENST00000510526 SMR3BP02814 79 aaPredicted RBP0.66□□□□□ -2.3
HMGB3P3-201ENST00000510526 MT1AP04731 61 aa0.66□□□□□ -2.3
HMGB3P3-201ENST00000510526 COL6A3P12111 3177 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms