RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 PP632Q6XCG6 107 aa1.15□□□□□ -2.22
CAST-226ENST00000509529 PRO2289Q9P1D8 64 aa1.15□□□□□ -2.22
CAST-226ENST00000509529 HELZ2Q9BYK8 2649 aaKnown RBP1.15□□□□□ -2.23
CAST-226ENST00000509529 FRAS1Q86XX4 4008 aa1.15□□□□□ -2.23
CAST-226ENST00000509529 HECTD4Q9Y4D8 3996 aa1.15□□□□□ -2.23
CAST-226ENST00000509529 DNAH14Q0VDD8 3507 aa1.15□□□□□ -2.23
CAST-226ENST00000509529 INE1O15225 51 aa1.14□□□□□ -2.23
CAST-226ENST00000509529 PLAC4Q8WY50 150 aa1.14□□□□□ -2.23
CAST-226ENST00000509529 PDE4DIPQ5VU43 2346 aa1.14□□□□□ -2.23
CAST-226ENST00000509529 LAMA2P24043 3122 aaKnown RBP1.14□□□□□ -2.23
CAST-226ENST00000509529 CHD6Q8TD26 2715 aa1.14□□□□□ -2.23
CAST-226ENST00000509529 CRIPTQ9P021 101 aa1.14□□□□□ -2.23
CAST-226ENST00000509529 AHCTF1Q8WYP5 2266 aa1.14□□□□□ -2.23
CAST-226ENST00000509529 USP34Q70CQ2 3546 aa1.14□□□□□ -2.23
CAST-226ENST00000509529 M0QZ58 72 aa1.14□□□□□ -2.23
CAST-226ENST00000509529 SPINK1P00995 79 aa1.14□□□□□ -2.23
CAST-226ENST00000509529 ASH1LQ9NR48 2969 aaKnown RBP1.13□□□□□ -2.23
CAST-226ENST00000509529 DMDP11532 3685 aa1.13□□□□□ -2.23
CAST-226ENST00000509529 S4R3F8 94 aa1.13□□□□□ -2.23
CAST-226ENST00000509529 WNK2Q9Y3S1 2297 aa1.13□□□□□ -2.23
CAST-226ENST00000509529 FAT2Q9NYQ8 4349 aa1.13□□□□□ -2.23
CAST-226ENST00000509529 CNTRLQ7Z7A1 2325 aa1.13□□□□□ -2.23
CAST-226ENST00000509529 BRCA2P51587 3418 aa1.13□□□□□ -2.23
CAST-226ENST00000509529 CEP250Q9BV73 2442 aa1.13□□□□□ -2.23
CAST-226ENST00000509529 CIRBP-AS1Q8TBR5 109 aa1.13□□□□□ -2.23
CAST-226ENST00000509529 KRTAP2-1Q9BYU5 128 aa1.13□□□□□ -2.23
CAST-226ENST00000509529 DMXL2Q8TDJ6 3036 aa1.13□□□□□ -2.23
CAST-226ENST00000509529 LAMA1P25391 3075 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 ANKHD1Q8IWZ3 2542 aaKnown RBP1.12□□□□□ -2.23
CAST-226ENST00000509529 DCHS2Q6V1P9 2916 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 SMR3AQ99954 134 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 APLNQ9ULZ1 77 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 MYCBP2O75592 4640 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.12□□□□□ -2.23
CAST-226ENST00000509529 VCANP13611 3396 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 DEFB4AO15263 64 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 HTN3P15516 51 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 KRTAP12-1P59990 96 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 KRTAP13-2Q52LG2 175 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 VPS13AQ96RL7 3174 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 PKD1P98161 4303 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 KRTAP1-4P0C5Y4 121 aa1.12□□□□□ -2.23
CAST-226ENST00000509529 DCHS1Q96JQ0 3298 aa1.11□□□□□ -2.23
CAST-226ENST00000509529 KRTAP13-4Q3LI77 160 aa1.11□□□□□ -2.23
CAST-226ENST00000509529 BOD1L1Q8NFC6 3051 aa1.11□□□□□ -2.23
CAST-226ENST00000509529 UBR4Q5T4S7 5183 aa1.11□□□□□ -2.23
CAST-226ENST00000509529 LAMA3Q16787 3333 aa1.11□□□□□ -2.23
CAST-226ENST00000509529 HSPG2P98160 4391 aa1.11□□□□□ -2.23
CAST-226ENST00000509529 PKDREJQ9NTG1 2253 aa1.11□□□□□ -2.23
CAST-226ENST00000509529 COL6A5A8TX70 2615 aa1.11□□□□□ -2.23
CAST-226ENST00000509529 PKHD1P08F94 4074 aa1.11□□□□□ -2.23
CAST-226ENST00000509529 DNAH11Q96DT5 4516 aa1.11□□□□□ -2.23
CAST-226ENST00000509529 DSPP15924 2871 aaKnown RBP1.11□□□□□ -2.23
CAST-226ENST00000509529 MAP1AP78559 2803 aaPredicted RBP1.1□□□□□ -2.23
CAST-226ENST00000509529 PTPRZ1P23471 2315 aaPredicted RBP1.1□□□□□ -2.23
CAST-226ENST00000509529 FREM2Q5SZK8 3169 aa1.1□□□□□ -2.23
CAST-226ENST00000509529 SYNE2Q8WXH0 6885 aaKnown RBP1.1□□□□□ -2.23
CAST-226ENST00000509529 PRUNE2Q8WUY3 3088 aa1.1□□□□□ -2.23
CAST-226ENST00000509529 WDFY4Q6ZS81 3184 aa1.1□□□□□ -2.23
CAST-226ENST00000509529 SMG1Q96Q15 3661 aaKnown RBP1.09□□□□□ -2.23
CAST-226ENST00000509529 OTOGQ6ZRI0 2925 aa1.09□□□□□ -2.23
CAST-226ENST00000509529 MAP1BP46821 2468 aaKnown RBP1.09□□□□□ -2.23
CAST-226ENST00000509529 KNL1Q8NG31 2342 aa1.09□□□□□ -2.23
CAST-226ENST00000509529 SPEGQ15772 3267 aa1.09□□□□□ -2.23
CAST-226ENST00000509529 J3QKU1 62 aa1.09□□□□□ -2.23
CAST-226ENST00000509529 DNAH5Q8TE73 4624 aa1.09□□□□□ -2.23
CAST-226ENST00000509529 ZFHX4Q86UP3 3567 aa1.09□□□□□ -2.23
CAST-226ENST00000509529 HYDINQ4G0P3 5121 aa1.09□□□□□ -2.24
CAST-226ENST00000509529 SETD2Q9BYW2 2564 aaPredicted RBP1.09□□□□□ -2.24
CAST-226ENST00000509529 LYSTQ99698 3801 aa1.08□□□□□ -2.24
CAST-226ENST00000509529 XIRP2A4UGR9 3374 aa1.08□□□□□ -2.24
CAST-226ENST00000509529 RELNP78509 3460 aa1.08□□□□□ -2.24
CAST-226ENST00000509529 APC2O95996 2303 aa1.08□□□□□ -2.24
CAST-226ENST00000509529 NOTCH1P46531 2555 aa1.08□□□□□ -2.24
CAST-226ENST00000509529 CELSR3Q9NYQ7 3312 aa1.08□□□□□ -2.24
CAST-226ENST00000509529 TNXBP22105 4242 aa1.08□□□□□ -2.24
CAST-226ENST00000509529 TENM4Q6N022 2769 aa1.08□□□□□ -2.24
CAST-226ENST00000509529 Q5VSD8 79 aa1.08□□□□□ -2.24
CAST-226ENST00000509529 CACNA1HO95180 2353 aa1.08□□□□□ -2.24
CAST-226ENST00000509529 MGAQ8IWI9 3026 aa1.07□□□□□ -2.24
CAST-226ENST00000509529 PLECQ15149 4684 aaKnown RBP1.07□□□□□ -2.24
CAST-226ENST00000509529 HMCN2Q8NDA2 5059 aa1.07□□□□□ -2.24
CAST-226ENST00000509529 VPS13CQ709C8 3753 aa1.07□□□□□ -2.24
CAST-226ENST00000509529 SVEP1Q4LDE5 3571 aa1.07□□□□□ -2.24
CAST-226ENST00000509529 FLGP20930 4061 aaPredicted RBP1.07□□□□□ -2.24
CAST-226ENST00000509529 SPINK6Q6UWN8 80 aa1.07□□□□□ -2.24
CAST-226ENST00000509529 SETXQ7Z333 2677 aaKnown RBP1.07□□□□□ -2.24
CAST-226ENST00000509529 MACF1Q9UPN3 7388 aaKnown RBP1.06□□□□□ -2.24
CAST-226ENST00000509529 COL6A6A6NMZ7 2263 aa1.06□□□□□ -2.24
CAST-226ENST00000509529 C10orf95Q9H7T3 257 aa1.06□□□□□ -2.24
CAST-226ENST00000509529 DNHD1Q96M86 4753 aa1.06□□□□□ -2.24
CAST-226ENST00000509529 VPS13BQ7Z7G8 4022 aa1.06□□□□□ -2.24
CAST-226ENST00000509529 FAM186AA6NE01 2351 aa1.06□□□□□ -2.24
CAST-226ENST00000509529 ATRXP46100 2492 aa1.06□□□□□ -2.24
CAST-226ENST00000509529 DMXL1Q9Y485 3027 aa1.06□□□□□ -2.24
CAST-226ENST00000509529 OTOGLQ3ZCN5 2332 aa1.05□□□□□ -2.24
CAST-226ENST00000509529 LRBAP50851 2863 aa1.05□□□□□ -2.24
CAST-226ENST00000509529 PRRC2CQ9Y520 2896 aaKnown RBP1.05□□□□□ -2.24
CAST-226ENST00000509529 NIPBLQ6KC79 2804 aaeCLIP1.05□□□□□ -2.246e-9■■■■□ 19.5
CAST-226ENST00000509529 CDH23Q9H251 3354 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms