RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 MPLKIPQ8TAP9 179 aa5.46□□□□□ -1.54
RNF4-212ENST00000509258 IGHV6-1A0A0B4J1U7 121 aa5.45□□□□□ -1.54
RNF4-212ENST00000509258 TRACP01848 142 aa5.45□□□□□ -1.54
RNF4-212ENST00000509258 MT2AP02795 61 aa5.45□□□□□ -1.54
RNF4-212ENST00000509258 COX6CP09669 75 aa5.44□□□□□ -1.54
RNF4-212ENST00000509258 VPS25Q9BRG1 176 aa5.44□□□□□ -1.54
RNF4-212ENST00000509258 NAA38Q9BRA0 125 aaKnown RBP5.43□□□□□ -1.54
RNF4-212ENST00000509258 C8orf87E5RJ46 101 aa5.42□□□□□ -1.54
RNF4-212ENST00000509258 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
RNF4-212ENST00000509258 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
RNF4-212ENST00000509258 A0A1B0GVX0 72 aa5.41□□□□□ -1.54
RNF4-212ENST00000509258 MT1FP04733 61 aa5.41□□□□□ -1.54
RNF4-212ENST00000509258 BAALC-AS2P0C853 105 aa5.41□□□□□ -1.54
RNF4-212ENST00000509258 SCGB1C2P0DMR2 95 aa5.41□□□□□ -1.54
RNF4-212ENST00000509258 RBM3P98179 157 aaKnown RBP5.4□□□□□ -1.54
RNF4-212ENST00000509258 C21orf62-AS1Q17RA5 79 aa5.4□□□□□ -1.54
RNF4-212ENST00000509258 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.54
RNF4-212ENST00000509258 LINC00846Q9NV44 126 aa5.39□□□□□ -1.55
RNF4-212ENST00000509258 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
RNF4-212ENST00000509258 Q6ZQT0 140 aa5.37□□□□□ -1.55
RNF4-212ENST00000509258 DSCR8Q96T75 97 aa5.37□□□□□ -1.55
RNF4-212ENST00000509258 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
RNF4-212ENST00000509258 J3KT08 172 aa5.36□□□□□ -1.55
RNF4-212ENST00000509258 C9JAW5 83 aa5.35□□□□□ -1.55
RNF4-212ENST00000509258 NDUFB1O75438 58 aa5.35□□□□□ -1.55
RNF4-212ENST00000509258 ZCCHC13Q8WW36 166 aaKnown RBP5.35□□□□□ -1.55
RNF4-212ENST00000509258 IGKV3D-7A0A0C4DH55 119 aa5.33□□□□□ -1.56
RNF4-212ENST00000509258 Q8N9P0 234 aaPredicted RBP5.33□□□□□ -1.56
RNF4-212ENST00000509258 LOC110117498A0A087WWA1 95 aa5.32□□□□□ -1.56
RNF4-212ENST00000509258 SPINK7P58062 85 aa5.32□□□□□ -1.56
RNF4-212ENST00000509258 LYRM7Q5U5X0 104 aa5.32□□□□□ -1.56
RNF4-212ENST00000509258 C8orf17Q9NRJ1 99 aa5.32□□□□□ -1.56
RNF4-212ENST00000509258 ATXN8Q156A1 80 aa5.31□□□□□ -1.56
RNF4-212ENST00000509258 C14orf132Q9NPU4 83 aa5.31□□□□□ -1.56
RNF4-212ENST00000509258 A8MWP4 228 aa5.3□□□□□ -1.56
RNF4-212ENST00000509258 M0R143 59 aa5.3□□□□□ -1.56
RNF4-212ENST00000509258 A0A1B0GW54 56 aa5.27□□□□□ -1.57
RNF4-212ENST00000509258 JMJD7-PLA2G4BH0Y9G9 81 aa5.27□□□□□ -1.57
RNF4-212ENST00000509258 MMP24-AS1A0A0U1RRL7 71 aa5.26□□□□□ -1.57
RNF4-212ENST00000509258 SMIM6P0DI80 62 aa5.26□□□□□ -1.57
RNF4-212ENST00000509258 KRTAP19-6Q3LI70 58 aa5.26□□□□□ -1.57
RNF4-212ENST00000509258 WFDC13Q8IUB5 93 aa5.26□□□□□ -1.57
RNF4-212ENST00000509258 Q6ZVQ6 151 aa5.25□□□□□ -1.57
RNF4-212ENST00000509258 PRR15Q8IV56 129 aa5.25□□□□□ -1.57
RNF4-212ENST00000509258 PDE6GP18545 87 aa5.24□□□□□ -1.57
RNF4-212ENST00000509258 BATFQ16520 125 aa5.24□□□□□ -1.57
RNF4-212ENST00000509258 K7EQZ3 153 aa5.22□□□□□ -1.57
RNF4-212ENST00000509258 TAX1BP3O14907 124 aa5.21□□□□□ -1.58
RNF4-212ENST00000509258 NREPQ16612 68 aa5.2□□□□□ -1.58
RNF4-212ENST00000509258 TMEM254Q8TBM7 123 aa5.2□□□□□ -1.58
RNF4-212ENST00000509258 MRPL34Q9BQ48 92 aaKnown RBP5.2□□□□□ -1.58
RNF4-212ENST00000509258 C9orf118A6NHY6 69 aa5.19□□□□□ -1.58
RNF4-212ENST00000509258 TSTD3H0UI37 97 aa5.19□□□□□ -1.58
RNF4-212ENST00000509258 Q5W150 140 aa5.19□□□□□ -1.58
RNF4-212ENST00000509258 LOC105371267A0A1B0GV96 52 aa5.18□□□□□ -1.58
RNF4-212ENST00000509258 A0A1W2PPM0 123 aa5.16□□□□□ -1.58
RNF4-212ENST00000509258 hDV103S1A0JD37 113 aa5.16□□□□□ -1.58
RNF4-212ENST00000509258 H3BT86 120 aa5.16□□□□□ -1.58
RNF4-212ENST00000509258 KRTAP6-3Q3LI67 103 aa5.16□□□□□ -1.58
RNF4-212ENST00000509258 H1FX-AS1Q4G0G2 97 aa5.16□□□□□ -1.58
RNF4-212ENST00000509258 Q8N9L7 120 aa5.16□□□□□ -1.58
RNF4-212ENST00000509258 NDUFS5O43920 106 aa5.15□□□□□ -1.59
RNF4-212ENST00000509258 IGKV2D-30A0A075B6S6 120 aa5.12□□□□□ -1.59
RNF4-212ENST00000509258 BPY2O14599 106 aa5.12□□□□□ -1.59
RNF4-212ENST00000509258 IGKV2-30P06310 120 aa5.12□□□□□ -1.59
RNF4-212ENST00000509258 C7orf65Q6ZTY9 151 aa5.11□□□□□ -1.59
RNF4-212ENST00000509258 NEBP20929 6669 aa5.1□□□□□ -1.59
RNF4-212ENST00000509258 HCG22E2RYF7 251 aa5.08□□□□□ -1.6
RNF4-212ENST00000509258 PRO0461Q9UI25 63 aa5.08□□□□□ -1.6
RNF4-212ENST00000509258 SPCS1Q9Y6A9 102 aa5.08□□□□□ -1.6
RNF4-212ENST00000509258 CASC2Q6XLA1 102 aa5.07□□□□□ -1.6
RNF4-212ENST00000509258 C4orf26Q17RF5 130 aa5.06□□□□□ -1.6
RNF4-212ENST00000509258 KRTAP3-1Q9BYR8 98 aa5.05□□□□□ -1.6
RNF4-212ENST00000509258 FAM236AA0A1B0GUQ0 79 aa5.02□□□□□ -1.61
RNF4-212ENST00000509258 FAM236BA0A1B0GV22 79 aa5.02□□□□□ -1.61
RNF4-212ENST00000509258 CXCL6P80162 114 aa5□□□□□ -1.61
RNF4-212ENST00000509258 K7EP34 96 aa4.99□□□□□ -1.61
RNF4-212ENST00000509258 COL5A1-AS1Q5SY13 56 aa4.99□□□□□ -1.61
RNF4-212ENST00000509258 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
RNF4-212ENST00000509258 C5orf47Q569G3 176 aa4.98□□□□□ -1.61
RNF4-212ENST00000509258 A6NN06 94 aa4.96□□□□□ -1.62
RNF4-212ENST00000509258 MT1BP07438 61 aa4.95□□□□□ -1.62
RNF4-212ENST00000509258 CSAG1Q6PB30 78 aa4.95□□□□□ -1.62
RNF4-212ENST00000509258 UBL5Q9BZL1 73 aa4.95□□□□□ -1.62
RNF4-212ENST00000509258 S4R3F8 94 aa4.95□□□□□ -1.62
RNF4-212ENST00000509258 Q5VV11 94 aa4.94□□□□□ -1.62
RNF4-212ENST00000509258 KRTAP20-1Q3LI63 56 aa4.93□□□□□ -1.62
RNF4-212ENST00000509258 LCA10Q71F78 164 aa4.93□□□□□ -1.62
RNF4-212ENST00000509258 C1orf64Q8NEQ6 169 aa4.92□□□□□ -1.62
RNF4-212ENST00000509258 A0A087WVE0 104 aa4.9□□□□□ -1.63
RNF4-212ENST00000509258 KRTAP19-8Q3LI54 63 aa4.89□□□□□ -1.63
RNF4-212ENST00000509258 ETDBQ3ZM63 59 aa4.89□□□□□ -1.63
RNF4-212ENST00000509258 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
RNF4-212ENST00000509258 F8W1H4 67 aa4.88□□□□□ -1.63
RNF4-212ENST00000509258 GTF2H5Q6ZYL4 71 aa4.88□□□□□ -1.63
RNF4-212ENST00000509258 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
RNF4-212ENST00000509258 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
RNF4-212ENST00000509258 TP53AIP1Q9HCN2 124 aa4.88□□□□□ -1.63
RNF4-212ENST00000509258 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
RNF4-212ENST00000509258 KLKP1Q107X0 134 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms