RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 TYMSOSQ8TAI1 123 aa7.66□□□□□ -1.18
SMG7-214ENST00000508461 SMR3BP02814 79 aaPredicted RBP7.66□□□□□ -1.18
SMG7-214ENST00000508461 HUWE1Q7Z6Z7 4374 aaKnown RBP7.65□□□□□ -1.18
SMG7-214ENST00000508461 IGLV7-46A0A075B6I9 117 aa7.64□□□□□ -1.19
SMG7-214ENST00000508461 Q6ZR54 194 aa7.64□□□□□ -1.19
SMG7-214ENST00000508461 Q8N9P0 234 aaPredicted RBP7.64□□□□□ -1.19
SMG7-214ENST00000508461 LINC00483Q53H64 154 aa7.63□□□□□ -1.19
SMG7-214ENST00000508461 ACYP2P14621 99 aa7.62□□□□□ -1.19
SMG7-214ENST00000508461 Q96NJ1 140 aa7.62□□□□□ -1.19
SMG7-214ENST00000508461 DNAH10Q8IVF4 4471 aa7.61□□□□□ -1.19
SMG7-214ENST00000508461 FAM229AH3BQW9 127 aa7.6□□□□□ -1.19
SMG7-214ENST00000508461 C8orf87E5RJ46 101 aa7.6□□□□□ -1.19
SMG7-214ENST00000508461 C7orf65Q6ZTY9 151 aa7.59□□□□□ -1.19
SMG7-214ENST00000508461 Q5VV11 94 aa7.58□□□□□ -1.2
SMG7-214ENST00000508461 KRTAP10-1P60331 282 aa7.58□□□□□ -1.2
SMG7-214ENST00000508461 MEGF8Q7Z7M0 2845 aa7.57□□□□□ -1.2
SMG7-214ENST00000508461 Q5W150 140 aa7.57□□□□□ -1.2
SMG7-214ENST00000508461 HRES1P13985 223 aa7.57□□□□□ -1.2
SMG7-214ENST00000508461 A8MU10 97 aa7.56□□□□□ -1.2
SMG7-214ENST00000508461 A0A1B0GU69 56 aa7.55□□□□□ -1.2
SMG7-214ENST00000508461 SEC61GP60059 68 aa7.53□□□□□ -1.2
SMG7-214ENST00000508461 C9orf92A6NGG3 77 aa7.53□□□□□ -1.2
SMG7-214ENST00000508461 LYSTQ99698 3801 aa7.49□□□□□ -1.21
SMG7-214ENST00000508461 Q8N1X5 172 aa7.49□□□□□ -1.21
SMG7-214ENST00000508461 LINC00304Q8N9R0 145 aa7.48□□□□□ -1.21
SMG7-214ENST00000508461 DMBT1Q9UGM3 2413 aaPredicted RBP7.47□□□□□ -1.21
SMG7-214ENST00000508461 SPINK7P58062 85 aa7.45□□□□□ -1.22
SMG7-214ENST00000508461 KRTAP13-2Q52LG2 175 aa7.45□□□□□ -1.22
SMG7-214ENST00000508461 Q75L30 129 aa7.44□□□□□ -1.22
SMG7-214ENST00000508461 PLECQ15149 4684 aaKnown RBP7.43□□□□□ -1.22
SMG7-214ENST00000508461 LINC01558Q9Y6Z2 57 aa7.43□□□□□ -1.22
SMG7-214ENST00000508461 ATP11AUNQ6ZP68 121 aa7.42□□□□□ -1.22
SMG7-214ENST00000508461 DNAH9Q9NYC9 4486 aa7.41□□□□□ -1.22
SMG7-214ENST00000508461 CDC42SE1Q9NRR8 79 aa7.41□□□□□ -1.22
SMG7-214ENST00000508461 LCA10Q71F78 164 aa7.39□□□□□ -1.23
SMG7-214ENST00000508461 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
SMG7-214ENST00000508461 CMYA5Q8N3K9 4069 aa7.36□□□□□ -1.23
SMG7-214ENST00000508461 ASB16-AS1Q495Z4 193 aa7.35□□□□□ -1.23
SMG7-214ENST00000508461 UQCR11O14957 56 aa7.33□□□□□ -1.24
SMG7-214ENST00000508461 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
SMG7-214ENST00000508461 KTN1-AS1Q86SY8 53 aa7.32□□□□□ -1.24
SMG7-214ENST00000508461 DMAC1Q96GE9 116 aa7.31□□□□□ -1.24
SMG7-214ENST00000508461 STARD9Q9P2P6 4700 aa7.29□□□□□ -1.24
SMG7-214ENST00000508461 DNAH7Q8WXX0 4024 aa7.26□□□□□ -1.25
SMG7-214ENST00000508461 KRTAP1-4P0C5Y4 121 aa7.26□□□□□ -1.25
SMG7-214ENST00000508461 DNAH3Q8TD57 4116 aa7.24□□□□□ -1.25
SMG7-214ENST00000508461 DNAH1Q9P2D7 4330 aa7.24□□□□□ -1.25
SMG7-214ENST00000508461 Q6ZSA8 131 aa7.24□□□□□ -1.25
SMG7-214ENST00000508461 PRAC1Q96KF2 57 aa7.23□□□□□ -1.25
SMG7-214ENST00000508461 PRKDCP78527 4128 aaKnown RBP7.22□□□□□ -1.25
SMG7-214ENST00000508461 KMT2AQ03164 3969 aa7.21□□□□□ -1.26
SMG7-214ENST00000508461 RBM12B-AS1Q9P1G2 102 aa7.18□□□□□ -1.26
SMG7-214ENST00000508461 K7ERS5 55 aa7.17□□□□□ -1.26
SMG7-214ENST00000508461 DNAH11Q96DT5 4516 aa7.16□□□□□ -1.26
SMG7-214ENST00000508461 KRTAP13-3Q3SY46 172 aa7.15□□□□□ -1.26
SMG7-214ENST00000508461 DNHD1Q96M86 4753 aa7.14□□□□□ -1.27
SMG7-214ENST00000508461 FRAS1Q86XX4 4008 aa7.14□□□□□ -1.27
SMG7-214ENST00000508461 KRTAP16-1A8MUX0 517 aa7.13□□□□□ -1.27
SMG7-214ENST00000508461 A6NN06 94 aa7.12□□□□□ -1.27
SMG7-214ENST00000508461 VPS13DQ5THJ4 4388 aa7.1□□□□□ -1.27
SMG7-214ENST00000508461 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
SMG7-214ENST00000508461 DNAH8Q96JB1 4490 aa7.07□□□□□ -1.28
SMG7-214ENST00000508461 A0A1B0GU33 70 aa7.06□□□□□ -1.28
SMG7-214ENST00000508461 A0A0D9SG42 100 aa7.05□□□□□ -1.28
SMG7-214ENST00000508461 DNAH17Q9UFH2 4485 aa7.03□□□□□ -1.28
SMG7-214ENST00000508461 Q5VSD8 79 aa7.01□□□□□ -1.29
SMG7-214ENST00000508461 SPATA8Q6RVD6 105 aa7.01□□□□□ -1.29
SMG7-214ENST00000508461 DNAH2Q9P225 4427 aa6.99□□□□□ -1.29
SMG7-214ENST00000508461 LRP1BQ9NZR2 4599 aa6.98□□□□□ -1.29
SMG7-214ENST00000508461 DNAH6Q9C0G6 4158 aa6.98□□□□□ -1.29
SMG7-214ENST00000508461 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
SMG7-214ENST00000508461 CSAG1Q6PB30 78 aa6.97□□□□□ -1.29
SMG7-214ENST00000508461 RPS29P62273 56 aaKnown RBP6.96□□□□□ -1.3
SMG7-214ENST00000508461 HECTD4Q9Y4D8 3996 aa6.95□□□□□ -1.3
SMG7-214ENST00000508461 A8MUU9 505 aa6.93□□□□□ -1.3
SMG7-214ENST00000508461 COX6B2Q6YFQ2 88 aa6.93□□□□□ -1.3
SMG7-214ENST00000508461 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
SMG7-214ENST00000508461 DNAH5Q8TE73 4624 aa6.91□□□□□ -1.3
SMG7-214ENST00000508461 H1FX-AS1Q4G0G2 97 aa6.89□□□□□ -1.31
SMG7-214ENST00000508461 DYNC2H1Q8NCM8 4307 aaKnown RBP6.87□□□□□ -1.31
SMG7-214ENST00000508461 LINC01554Q52M75 96 aa6.87□□□□□ -1.31
SMG7-214ENST00000508461 FAT1Q14517 4588 aa6.87□□□□□ -1.31
SMG7-214ENST00000508461 S4R3F8 94 aa6.84□□□□□ -1.31
SMG7-214ENST00000508461 SPINT4Q6UDR6 99 aa6.84□□□□□ -1.32
SMG7-214ENST00000508461 HYDINQ4G0P3 5121 aa6.83□□□□□ -1.32
SMG7-214ENST00000508461 VPS13BQ7Z7G8 4022 aa6.82□□□□□ -1.32
SMG7-214ENST00000508461 A0A1B0GVY2 172 aa6.82□□□□□ -1.32
SMG7-214ENST00000508461 H0YAA0 97 aa6.81□□□□□ -1.32
SMG7-214ENST00000508461 KRTAP21-3Q3LHN1 58 aa6.8□□□□□ -1.32
SMG7-214ENST00000508461 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
SMG7-214ENST00000508461 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
SMG7-214ENST00000508461 J3QL48 77 aa6.74□□□□□ -1.33
SMG7-214ENST00000508461 DYNC1H1Q14204 4646 aaKnown RBP6.73□□□□□ -1.33
SMG7-214ENST00000508461 ALMS1Q8TCU4 4167 aa6.72□□□□□ -1.33
SMG7-214ENST00000508461 XP32Q5T750 250 aa6.72□□□□□ -1.33
SMG7-214ENST00000508461 PKHD1P08F94 4074 aa6.7□□□□□ -1.34
SMG7-214ENST00000508461 KRTAP10-4P60372 401 aaPredicted RBP6.66□□□□□ -1.34
SMG7-214ENST00000508461 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
SMG7-214ENST00000508461 ROMO1P60602 79 aa6.62□□□□□ -1.35
SMG7-214ENST00000508461 MYCBP2O75592 4640 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms