RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 HUWE1Q7Z6Z7 4374 aaKnown RBP1.86□□□□□ -2.11
NEDD4-208ENST00000508342 Q6ZR54 194 aa1.86□□□□□ -2.11
NEDD4-208ENST00000508342 C8orf17Q9NRJ1 99 aa1.85□□□□□ -2.11
NEDD4-208ENST00000508342 TENM3Q9P273 2699 aa1.85□□□□□ -2.11
NEDD4-208ENST00000508342 SSPOA2VEC9 5147 aa1.85□□□□□ -2.11
NEDD4-208ENST00000508342 LITAFQ99732 161 aa1.85□□□□□ -2.11
NEDD4-208ENST00000508342 KCNQ1DNQ9H478 68 aa1.85□□□□□ -2.11
NEDD4-208ENST00000508342 SPRR4Q96PI1 79 aa1.85□□□□□ -2.11
NEDD4-208ENST00000508342 HERC2O95714 4834 aa1.85□□□□□ -2.11
NEDD4-208ENST00000508342 PRR34Q9NV39 138 aa1.85□□□□□ -2.11
NEDD4-208ENST00000508342 DNAH17Q9UFH2 4485 aa1.84□□□□□ -2.11
NEDD4-208ENST00000508342 HIVEP1P15822 2718 aa1.84□□□□□ -2.11
NEDD4-208ENST00000508342 R4GN34 69 aa1.84□□□□□ -2.11
NEDD4-208ENST00000508342 TLX1NBP0CAT3 122 aa1.84□□□□□ -2.11
NEDD4-208ENST00000508342 DNHD1Q96M86 4753 aa1.84□□□□□ -2.11
NEDD4-208ENST00000508342 KRTAP1-5Q9BYS1 174 aa1.84□□□□□ -2.12
NEDD4-208ENST00000508342 FAM229BQ4G0N7 80 aa1.84□□□□□ -2.12
NEDD4-208ENST00000508342 FRYLO94915 3013 aa1.83□□□□□ -2.12
NEDD4-208ENST00000508342 Q5VV11 94 aa1.83□□□□□ -2.12
NEDD4-208ENST00000508342 DNAH7Q8WXX0 4024 aa1.83□□□□□ -2.12
NEDD4-208ENST00000508342 DMAC1Q96GE9 116 aa1.83□□□□□ -2.12
NEDD4-208ENST00000508342 CSMD1Q96PZ7 3565 aa1.83□□□□□ -2.12
NEDD4-208ENST00000508342 CSMD2Q7Z408 3487 aa1.83□□□□□ -2.12
NEDD4-208ENST00000508342 PRKDCP78527 4128 aaKnown RBP1.83□□□□□ -2.12
NEDD4-208ENST00000508342 DSPP15924 2871 aaKnown RBP1.83□□□□□ -2.12
NEDD4-208ENST00000508342 MGAQ8IWI9 3026 aa1.82□□□□□ -2.12
NEDD4-208ENST00000508342 TENM1Q9UKZ4 2725 aa1.82□□□□□ -2.12
NEDD4-208ENST00000508342 RELNP78509 3460 aa1.82□□□□□ -2.12
NEDD4-208ENST00000508342 LOC110117498A0A087WWA1 95 aa1.82□□□□□ -2.12
NEDD4-208ENST00000508342 MIR22HGQ0VDD5 57 aa1.82□□□□□ -2.12
NEDD4-208ENST00000508342 FRAS1Q86XX4 4008 aa1.81□□□□□ -2.12
NEDD4-208ENST00000508342 LINC01558Q9Y6Z2 57 aa1.81□□□□□ -2.12
NEDD4-208ENST00000508342 A0A1B0GVY2 172 aa1.81□□□□□ -2.12
NEDD4-208ENST00000508342 S4R3F8 94 aa1.81□□□□□ -2.12
NEDD4-208ENST00000508342 Q8N377 158 aa1.81□□□□□ -2.12
NEDD4-208ENST00000508342 ATMQ13315 3056 aa1.81□□□□□ -2.12
NEDD4-208ENST00000508342 LOC400499M0QZD8 3231 aa1.81□□□□□ -2.12
NEDD4-208ENST00000508342 COA5Q86WW8 74 aa1.8□□□□□ -2.12
NEDD4-208ENST00000508342 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
NEDD4-208ENST00000508342 ZCCHC13Q8WW36 166 aaKnown RBP1.8□□□□□ -2.12
NEDD4-208ENST00000508342 DMXL2Q8TDJ6 3036 aa1.8□□□□□ -2.12
NEDD4-208ENST00000508342 KRTAP29-1A8MX34 341 aaPredicted RBP1.8□□□□□ -2.12
NEDD4-208ENST00000508342 NBEAL2Q6ZNJ1 2754 aa1.8□□□□□ -2.12
NEDD4-208ENST00000508342 NF1P21359 2839 aa1.8□□□□□ -2.12
NEDD4-208ENST00000508342 A0A0G2JQZ4 141 aa1.79□□□□□ -2.12
NEDD4-208ENST00000508342 ITPR1Q14643 2758 aa1.79□□□□□ -2.12
NEDD4-208ENST00000508342 KALRNO60229 2985 aa1.79□□□□□ -2.12
NEDD4-208ENST00000508342 A0A096LNJ9 63 aa1.78□□□□□ -2.12
NEDD4-208ENST00000508342 CELSR2Q9HCU4 2923 aa1.78□□□□□ -2.12
NEDD4-208ENST00000508342 HERC1Q15751 4861 aa1.78□□□□□ -2.12
NEDD4-208ENST00000508342 SPINK7P58062 85 aa1.78□□□□□ -2.12
NEDD4-208ENST00000508342 LRBAP50851 2863 aa1.78□□□□□ -2.12
NEDD4-208ENST00000508342 TACC2O95359 2948 aa1.78□□□□□ -2.12
NEDD4-208ENST00000508342 Q6ZRN7 208 aaPredicted RBP1.78□□□□□ -2.12
NEDD4-208ENST00000508342 A0A1B0GU33 70 aa1.77□□□□□ -2.13
NEDD4-208ENST00000508342 Q8NDZ9 215 aa1.77□□□□□ -2.13
NEDD4-208ENST00000508342 CFAP47Q6ZTR5 3102 aa1.77□□□□□ -2.13
NEDD4-208ENST00000508342 PKHD1L1Q86WI1 4243 aa1.77□□□□□ -2.13
NEDD4-208ENST00000508342 NBEAQ8NFP9 2946 aa1.77□□□□□ -2.13
NEDD4-208ENST00000508342 VPS13BQ7Z7G8 4022 aa1.77□□□□□ -2.13
NEDD4-208ENST00000508342 DYNC2H1Q8NCM8 4307 aaKnown RBP1.77□□□□□ -2.13
NEDD4-208ENST00000508342 PKD1L1Q8TDX9 2849 aa1.77□□□□□ -2.13
NEDD4-208ENST00000508342 M0QZ58 72 aa1.76□□□□□ -2.13
NEDD4-208ENST00000508342 H1FX-AS1Q4G0G2 97 aa1.76□□□□□ -2.13
NEDD4-208ENST00000508342 Q8N9P0 234 aaPredicted RBP1.76□□□□□ -2.13
NEDD4-208ENST00000508342 BOD1L1Q8NFC6 3051 aa1.76□□□□□ -2.13
NEDD4-208ENST00000508342 LYSTQ99698 3801 aa1.76□□□□□ -2.13
NEDD4-208ENST00000508342 KRTAP26-1Q6PEX3 210 aa1.76□□□□□ -2.13
NEDD4-208ENST00000508342 ROMO1P60602 79 aa1.75□□□□□ -2.13
NEDD4-208ENST00000508342 APCP25054 2843 aa1.75□□□□□ -2.13
NEDD4-208ENST00000508342 TENM2Q9NT68 2774 aa1.75□□□□□ -2.13
NEDD4-208ENST00000508342 PDZD2O15018 2839 aa1.75□□□□□ -2.13
NEDD4-208ENST00000508342 A0A1W2PNM2 257 aa1.75□□□□□ -2.13
NEDD4-208ENST00000508342 PLECQ15149 4684 aaKnown RBP1.75□□□□□ -2.13
NEDD4-208ENST00000508342 SRRM2Q9UQ35 2752 aaKnown RBP1.75□□□□□ -2.13
NEDD4-208ENST00000508342 PANO1I0J062 215 aa1.75□□□□□ -2.13
NEDD4-208ENST00000508342 DNAH9Q9NYC9 4486 aa1.74□□□□□ -2.13
NEDD4-208ENST00000508342 SPATA8Q6RVD6 105 aa1.74□□□□□ -2.13
NEDD4-208ENST00000508342 C20orf166-AS1Q96NR2 134 aa1.74□□□□□ -2.13
NEDD4-208ENST00000508342 ASH1LQ9NR48 2969 aaKnown RBP1.74□□□□□ -2.13
NEDD4-208ENST00000508342 DNAH1Q9P2D7 4330 aa1.73□□□□□ -2.13
NEDD4-208ENST00000508342 VPS13DQ5THJ4 4388 aa1.73□□□□□ -2.13
NEDD4-208ENST00000508342 SVEP1Q4LDE5 3571 aa1.72□□□□□ -2.13
NEDD4-208ENST00000508342 MUC2Q02817 5179 aa1.72□□□□□ -2.13
NEDD4-208ENST00000508342 NIPBLQ6KC79 2804 aaeCLIP1.71□□□□□ -2.14
NEDD4-208ENST00000508342 Q5W150 140 aa1.71□□□□□ -2.14
NEDD4-208ENST00000508342 DNAH2Q9P225 4427 aa1.71□□□□□ -2.14
NEDD4-208ENST00000508342 KRTAP19-4Q3LI73 84 aa1.71□□□□□ -2.14
NEDD4-208ENST00000508342 ADM2Q7Z4H4 148 aa1.7□□□□□ -2.14
NEDD4-208ENST00000508342 COL12A1Q99715 3063 aa1.7□□□□□ -2.14
NEDD4-208ENST00000508342 KMT2AQ03164 3969 aa1.7□□□□□ -2.14
NEDD4-208ENST00000508342 CELSR1Q9NYQ6 3014 aa1.7□□□□□ -2.14
NEDD4-208ENST00000508342 VWFP04275 2813 aa1.7□□□□□ -2.14
NEDD4-208ENST00000508342 RPL37P61927 97 aaKnown RBP1.69□□□□□ -2.14
NEDD4-208ENST00000508342 RPS29P62273 56 aaKnown RBP1.69□□□□□ -2.14
NEDD4-208ENST00000508342 DCHS2Q6V1P9 2916 aa1.69□□□□□ -2.14
NEDD4-208ENST00000508342 SPRR1BP22528 89 aa1.69□□□□□ -2.14
NEDD4-208ENST00000508342 STARD9Q9P2P6 4700 aa1.68□□□□□ -2.14
NEDD4-208ENST00000508342 A8MUU9 505 aa1.68□□□□□ -2.14
NEDD4-208ENST00000508342 RNF213Q63HN8 5207 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms