RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 UNC79Q9P2D8 2635 aa0.82□□□□□ -2.28
GYPA-205ENST00000508337 PTPN13Q12923 2485 aa0.81□□□□□ -2.28
GYPA-205ENST00000508337 ZFYVE26Q68DK2 2539 aa0.81□□□□□ -2.28
GYPA-205ENST00000508337 DMBT1Q9UGM3 2413 aaPredicted RBP0.81□□□□□ -2.28
GYPA-205ENST00000508337 FRAS1Q86XX4 4008 aa0.8□□□□□ -2.28
GYPA-205ENST00000508337 MAP1BP46821 2468 aaKnown RBP0.8□□□□□ -2.28
GYPA-205ENST00000508337 WNK1Q9H4A3 2382 aa0.78□□□□□ -2.28
GYPA-205ENST00000508337 TNXBP22105 4242 aa0.78□□□□□ -2.28
GYPA-205ENST00000508337 HIVEP3Q5T1R4 2406 aa0.78□□□□□ -2.28
GYPA-205ENST00000508337 K7EIM0 57 aa0.77□□□□□ -2.29
GYPA-205ENST00000508337 OTOGQ6ZRI0 2925 aa0.76□□□□□ -2.29
GYPA-205ENST00000508337 PKD1L1Q8TDX9 2849 aa0.76□□□□□ -2.29
GYPA-205ENST00000508337 BSNQ9UPA5 3926 aa0.76□□□□□ -2.29
GYPA-205ENST00000508337 SETXQ7Z333 2677 aaKnown RBP0.75□□□□□ -2.29
GYPA-205ENST00000508337 NAV2Q8IVL1 2488 aa0.75□□□□□ -2.29
GYPA-205ENST00000508337 ACANP16112 2415 aa0.74□□□□□ -2.29
GYPA-205ENST00000508337 COL6A5A8TX70 2615 aa0.74□□□□□ -2.29
GYPA-205ENST00000508337 NF1P21359 2839 aa0.73□□□□□ -2.29
GYPA-205ENST00000508337 FAT2Q9NYQ8 4349 aa0.73□□□□□ -2.29
GYPA-205ENST00000508337 APC2O95996 2303 aa0.72□□□□□ -2.29
GYPA-205ENST00000508337 A0A0C4DFX4 3053 aa0.71□□□□□ -2.3
GYPA-205ENST00000508337 GCN1Q92616 2671 aaKnown RBP0.71□□□□□ -2.3
GYPA-205ENST00000508337 TMEM167AQ8TBQ9 72 aa0.71□□□□□ -2.3
GYPA-205ENST00000508337 MTORP42345 2549 aa0.71□□□□□ -2.3
GYPA-205ENST00000508337 ACACAQ13085 2346 aa0.7□□□□□ -2.3
GYPA-205ENST00000508337 PDZD2O15018 2839 aa0.7□□□□□ -2.3
GYPA-205ENST00000508337 SPRR2DP22532 72 aa0.69□□□□□ -2.3
GYPA-205ENST00000508337 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
GYPA-205ENST00000508337 RIF1Q5UIP0 2472 aaKnown RBP0.69□□□□□ -2.3
GYPA-205ENST00000508337 PRKDCP78527 4128 aaKnown RBP0.68□□□□□ -2.3
GYPA-205ENST00000508337 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
GYPA-205ENST00000508337 NSD1Q96L73 2696 aaPredicted RBP0.68□□□□□ -2.3
GYPA-205ENST00000508337 RPL39P5Q59GN2 51 aa0.68□□□□□ -2.3
GYPA-205ENST00000508337 LYSTQ99698 3801 aa0.68□□□□□ -2.3
GYPA-205ENST00000508337 FLNCQ14315 2725 aa0.68□□□□□ -2.3
GYPA-205ENST00000508337 UTP20O75691 2785 aaKnown RBP0.68□□□□□ -2.3
GYPA-205ENST00000508337 STAB1Q9NY15 2570 aa0.67□□□□□ -2.3
GYPA-205ENST00000508337 SETD2Q9BYW2 2564 aaPredicted RBP0.67□□□□□ -2.3
GYPA-205ENST00000508337 DMXL1Q9Y485 3027 aa0.67□□□□□ -2.3
GYPA-205ENST00000508337 CHD7Q9P2D1 2997 aa0.66□□□□□ -2.3
GYPA-205ENST00000508337 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
GYPA-205ENST00000508337 DEFB108AA8MXU0 73 aa0.66□□□□□ -2.3
GYPA-205ENST00000508337 SPTBN4Q9H254 2564 aa0.66□□□□□ -2.3
GYPA-205ENST00000508337 NCOR2Q9Y618 2525 aa0.66□□□□□ -2.3
GYPA-205ENST00000508337 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.3
GYPA-205ENST00000508337 LRRK2Q5S007 2527 aa0.65□□□□□ -2.31
GYPA-205ENST00000508337 AHNAK2Q8IVF2 5795 aa0.65□□□□□ -2.31
GYPA-205ENST00000508337 A0A096LNI7 61 aa0.65□□□□□ -2.31
GYPA-205ENST00000508337 CCDC168Q8NDH2 2452 aa0.65□□□□□ -2.31
GYPA-205ENST00000508337 FLNBO75369 2602 aaKnown RBP0.64□□□□□ -2.31
GYPA-205ENST00000508337 USP24Q9UPU5 2620 aa0.64□□□□□ -2.31
GYPA-205ENST00000508337 SONP18583 2426 aaKnown RBP0.64□□□□□ -2.31
GYPA-205ENST00000508337 HUWE1Q7Z6Z7 4374 aaKnown RBP0.63□□□□□ -2.31
GYPA-205ENST00000508337 ANKHD1Q8IWZ3 2542 aaKnown RBP0.63□□□□□ -2.31
GYPA-205ENST00000508337 SPRR2BP35325 72 aa0.63□□□□□ -2.31
GYPA-205ENST00000508337 EPG5Q9HCE0 2579 aa0.63□□□□□ -2.31
GYPA-205ENST00000508337 FAM186AA6NE01 2351 aa0.63□□□□□ -2.31
GYPA-205ENST00000508337 SACSQ9NZJ4 4579 aa0.63□□□□□ -2.31
GYPA-205ENST00000508337 CACNA1AO00555 2505 aa0.62□□□□□ -2.31
GYPA-205ENST00000508337 GPR98Q8WXG9 6306 aa0.61□□□□□ -2.31
GYPA-205ENST00000508337 MYCBP2O75592 4640 aa0.61□□□□□ -2.31
GYPA-205ENST00000508337 DNAH11Q96DT5 4516 aa0.61□□□□□ -2.31
GYPA-205ENST00000508337 KRTAP6-2Q3LI66 62 aa0.61□□□□□ -2.31
GYPA-205ENST00000508337 KRTAP8-1Q8IUC2 63 aa0.61□□□□□ -2.31
GYPA-205ENST00000508337 FASNP49327 2511 aaKnown RBP0.61□□□□□ -2.31
GYPA-205ENST00000508337 RHPN1-AS1Q9BWJ2 59 aa0.6□□□□□ -2.31
GYPA-205ENST00000508337 TACC2O95359 2948 aa0.59□□□□□ -2.31
GYPA-205ENST00000508337 ZZEF1O43149 2961 aa0.59□□□□□ -2.31
GYPA-205ENST00000508337 SPG11Q96JI7 2443 aa0.59□□□□□ -2.32
GYPA-205ENST00000508337 TENM2Q9NT68 2774 aa0.59□□□□□ -2.32
GYPA-205ENST00000508337 CRYBG3Q68DQ2 2970 aa0.59□□□□□ -2.32
GYPA-205ENST00000508337 ANKRD11Q6UB99 2663 aaPredicted RBP0.59□□□□□ -2.32
GYPA-205ENST00000508337 DCHS2Q6V1P9 2916 aa0.58□□□□□ -2.32
GYPA-205ENST00000508337 HRNRQ86YZ3 2850 aaPredicted RBP0.58□□□□□ -2.32
GYPA-205ENST00000508337 KMT2AQ03164 3969 aa0.58□□□□□ -2.32
GYPA-205ENST00000508337 NBEAL2Q6ZNJ1 2754 aa0.58□□□□□ -2.32
GYPA-205ENST00000508337 COL7A1Q02388 2944 aa0.58□□□□□ -2.32
GYPA-205ENST00000508337 LRP1Q07954 4544 aaKnown RBP0.57□□□□□ -2.32
GYPA-205ENST00000508337 MT1AP04731 61 aa0.57□□□□□ -2.32
GYPA-205ENST00000508337 VPS13DQ5THJ4 4388 aa0.57□□□□□ -2.32
GYPA-205ENST00000508337 ACACBO00763 2458 aa0.57□□□□□ -2.32
GYPA-205ENST00000508337 VPS13BQ7Z7G8 4022 aa0.56□□□□□ -2.32
GYPA-205ENST00000508337 TEP1Q99973 2627 aaKnown RBP0.56□□□□□ -2.32
GYPA-205ENST00000508337 NBEAQ8NFP9 2946 aa0.56□□□□□ -2.32
GYPA-205ENST00000508337 CUBNO60494 3623 aa0.56□□□□□ -2.32
GYPA-205ENST00000508337 COL12A1Q99715 3063 aa0.56□□□□□ -2.32
GYPA-205ENST00000508337 USP9YO00507 2555 aaPredicted RBP0.55□□□□□ -2.32
GYPA-205ENST00000508337 SMR3BP02814 79 aaPredicted RBP0.55□□□□□ -2.32
GYPA-205ENST00000508337 APELAP0DMC3 54 aa0.55□□□□□ -2.32
GYPA-205ENST00000508337 HTN1P15515 57 aa0.55□□□□□ -2.32
GYPA-205ENST00000508337 SPRR2AP35326 72 aa0.55□□□□□ -2.32
GYPA-205ENST00000508337 IGSF10Q6WRI0 2623 aa0.55□□□□□ -2.32
GYPA-205ENST00000508337 LPAP08519 4548 aa0.54□□□□□ -2.32
GYPA-205ENST00000508337 H3BUX3 64 aa0.54□□□□□ -2.32
GYPA-205ENST00000508337 DEFB136Q30KP8 78 aa0.54□□□□□ -2.32
GYPA-205ENST00000508337 DNAH9Q9NYC9 4486 aa0.54□□□□□ -2.32
GYPA-205ENST00000508337 PKD1P98161 4303 aa0.54□□□□□ -2.32
GYPA-205ENST00000508337 MYO18BQ8IUG5 2567 aa0.53□□□□□ -2.32
GYPA-205ENST00000508337 KALRNO60229 2985 aa0.53□□□□□ -2.32
GYPA-205ENST00000508337 MAST4O15021 2626 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms