RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 HIST1H2BHQ93079 126 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 HIST1H2BNQ99877 126 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 HIST1H2BMQ99879 126 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 IGKV2D-30A0A075B6S6 120 aa2.78□□□□□ -1.96
GYPB-208ENST00000507009 IGHV6-1A0A0B4J1U7 121 aa2.78□□□□□ -1.96
GYPB-208ENST00000507009 PPDPFLQ8WWR9 84 aa2.78□□□□□ -1.96
GYPB-208ENST00000507009 H3BMG7 143 aa2.77□□□□□ -1.97
GYPB-208ENST00000507009 FABP2P12104 132 aa2.77□□□□□ -1.97
GYPB-208ENST00000507009 NDUFV3P56181 108 aaKnown RBP2.77□□□□□ -1.97
GYPB-208ENST00000507009 BVES-AS1Q5T3Y7 98 aa2.77□□□□□ -1.97
GYPB-208ENST00000507009 A8MWP4 228 aa2.76□□□□□ -1.97
GYPB-208ENST00000507009 SNCGO76070 127 aa2.75□□□□□ -1.97
GYPB-208ENST00000507009 A0A1W2PNM2 257 aa2.74□□□□□ -1.97
GYPB-208ENST00000507009 SPINK7P58062 85 aa2.74□□□□□ -1.97
GYPB-208ENST00000507009 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
GYPB-208ENST00000507009 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
GYPB-208ENST00000507009 HIST1H4GQ99525 98 aa2.74□□□□□ -1.97
GYPB-208ENST00000507009 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
GYPB-208ENST00000507009 LYRM7Q5U5X0 104 aa2.73□□□□□ -1.97
GYPB-208ENST00000507009 WFDC13Q8IUB5 93 aa2.73□□□□□ -1.97
GYPB-208ENST00000507009 RAB37Q96AX2 223 aa2.73□□□□□ -1.97
GYPB-208ENST00000507009 FAM218AQ96MZ4 157 aa2.73□□□□□ -1.97
GYPB-208ENST00000507009 HSBP1L1C9JCN9 74 aa2.72□□□□□ -1.97
GYPB-208ENST00000507009 ANKRD29Q8N6D5 301 aa2.72□□□□□ -1.97
GYPB-208ENST00000507009 ZCCHC13Q8WW36 166 aaKnown RBP2.72□□□□□ -1.97
GYPB-208ENST00000507009 TRACP01848 142 aa2.71□□□□□ -1.98
GYPB-208ENST00000507009 VPS25Q9BRG1 176 aa2.71□□□□□ -1.98
GYPB-208ENST00000507009 TRBV7-4A0A0J9YYF1 115 aa2.7□□□□□ -1.98
GYPB-208ENST00000507009 A0A1B0GVX0 72 aa2.7□□□□□ -1.98
GYPB-208ENST00000507009 A6NN06 94 aa2.7□□□□□ -1.98
GYPB-208ENST00000507009 C8orf87E5RJ46 101 aa2.7□□□□□ -1.98
GYPB-208ENST00000507009 H0YGX0 51 aa2.7□□□□□ -1.98
GYPB-208ENST00000507009 CCKP06307 115 aa2.7□□□□□ -1.98
GYPB-208ENST00000507009 LINC00472Q9H8W2 130 aa2.69□□□□□ -1.98
GYPB-208ENST00000507009 COA6Q5JTJ3 125 aaKnown RBP2.68□□□□□ -1.98
GYPB-208ENST00000507009 DNAL4O96015 105 aa2.67□□□□□ -1.98
GYPB-208ENST00000507009 S100A2P29034 98 aa2.66□□□□□ -1.98
GYPB-208ENST00000507009 H1FX-AS1Q4G0G2 97 aa2.66□□□□□ -1.98
GYPB-208ENST00000507009 ORMDL1Q9P0S3 153 aa2.66□□□□□ -1.98
GYPB-208ENST00000507009 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
GYPB-208ENST00000507009 A0A0B4J2C4 111 aa2.65□□□□□ -1.99
GYPB-208ENST00000507009 FAM236AA0A1B0GUQ0 79 aa2.65□□□□□ -1.99
GYPB-208ENST00000507009 FAM236BA0A1B0GV22 79 aa2.65□□□□□ -1.99
GYPB-208ENST00000507009 A0A1B0GX51 115 aa2.65□□□□□ -1.99
GYPB-208ENST00000507009 COX8AP10176 69 aa2.65□□□□□ -1.99
GYPB-208ENST00000507009 PSMB2P49721 201 aa2.65□□□□□ -1.99
GYPB-208ENST00000507009 C14orf144Q96I85 54 aa2.65□□□□□ -1.99
GYPB-208ENST00000507009 HIST1H2BLQ99880 126 aa2.65□□□□□ -1.99
GYPB-208ENST00000507009 NDUFB1O75438 58 aa2.64□□□□□ -1.99
GYPB-208ENST00000507009 HIST3H2BBQ8N257 126 aa2.64□□□□□ -1.99
GYPB-208ENST00000507009 DSCR8Q96T75 97 aa2.64□□□□□ -1.99
GYPB-208ENST00000507009 PRO1854Q9UHT4 67 aa2.64□□□□□ -1.99
GYPB-208ENST00000507009 IGKV3D-7A0A0C4DH55 119 aa2.63□□□□□ -1.99
GYPB-208ENST00000507009 J3KT08 172 aa2.63□□□□□ -1.99
GYPB-208ENST00000507009 TMEM256-PLSCR3K7ERE1 68 aa2.63□□□□□ -1.99
GYPB-208ENST00000507009 Q5VV11 94 aa2.63□□□□□ -1.99
GYPB-208ENST00000507009 C8orf17Q9NRJ1 99 aa2.63□□□□□ -1.99
GYPB-208ENST00000507009 NDUFS5O43920 106 aa2.62□□□□□ -1.99
GYPB-208ENST00000507009 C5orf47Q569G3 176 aa2.62□□□□□ -1.99
GYPB-208ENST00000507009 CEND1Q8N111 149 aa2.62□□□□□ -1.99
GYPB-208ENST00000507009 KMT2DO14686 5537 aa2.62□□□□□ -1.99
GYPB-208ENST00000507009 H3BQ85 93 aa2.61□□□□□ -1.99
GYPB-208ENST00000507009 MT1BP07438 61 aa2.61□□□□□ -1.99
GYPB-208ENST00000507009 FXYD2P54710 66 aa2.61□□□□□ -1.99
GYPB-208ENST00000507009 RBM3P98179 157 aaKnown RBP2.61□□□□□ -1.99
GYPB-208ENST00000507009 Q6ZVQ6 151 aa2.61□□□□□ -1.99
GYPB-208ENST00000507009 IMUPQ9GZP8 106 aa2.61□□□□□ -1.99
GYPB-208ENST00000507009 K7ERJ3 54 aa2.6□□□□□ -1.99
GYPB-208ENST00000507009 DLEU1O43261 78 aa2.6□□□□□ -1.99
GYPB-208ENST00000507009 KRTAP2-3P0C7H8 128 aa2.6□□□□□ -1.99
GYPB-208ENST00000507009 MT3P25713 68 aa2.6□□□□□ -1.99
GYPB-208ENST00000507009 SPATA45Q537H7 98 aa2.6□□□□□ -1.99
GYPB-208ENST00000507009 C2orf91Q6ZV80 131 aa2.6□□□□□ -1.99
GYPB-208ENST00000507009 KRTAP2-4Q9BYR9 128 aa2.6□□□□□ -1.99
GYPB-208ENST00000507009 C9JAW5 83 aa2.59□□□□□ -1.99
GYPB-208ENST00000507009 S100A6P06703 90 aa2.59□□□□□ -1.99
GYPB-208ENST00000507009 COX6CP09669 75 aa2.59□□□□□ -1.99
GYPB-208ENST00000507009 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
GYPB-208ENST00000507009 KRTAP10-5P60370 271 aa2.59□□□□□ -1.99
GYPB-208ENST00000507009 HIGD1BQ9P298 99 aa2.59□□□□□ -1.99
GYPB-208ENST00000507009 Q6ZQT0 140 aa2.58□□□□□ -2
GYPB-208ENST00000507009 SCGB1C2P0DMR2 95 aa2.57□□□□□ -2
GYPB-208ENST00000507009 C4orf26Q17RF5 130 aa2.57□□□□□ -2
GYPB-208ENST00000507009 C7orf65Q6ZTY9 151 aa2.57□□□□□ -2
GYPB-208ENST00000507009 MRPL34Q9BQ48 92 aaKnown RBP2.57□□□□□ -2
GYPB-208ENST00000507009 VAMP8Q9BV40 100 aa2.57□□□□□ -2
GYPB-208ENST00000507009 MMP24-AS1A0A0U1RRL7 71 aa2.56□□□□□ -2
GYPB-208ENST00000507009 SPRR2EP22531 72 aa2.56□□□□□ -2
GYPB-208ENST00000507009 S100A1P23297 94 aa2.56□□□□□ -2
GYPB-208ENST00000507009 SPRR2BP35325 72 aa2.56□□□□□ -2
GYPB-208ENST00000507009 SPRR2AP35326 72 aa2.56□□□□□ -2
GYPB-208ENST00000507009 KRTAP19-8Q3LI54 63 aa2.56□□□□□ -2
GYPB-208ENST00000507009 hDV103S1A0JD37 113 aa2.55□□□□□ -2
GYPB-208ENST00000507009 BAALC-AS2P0C853 105 aa2.55□□□□□ -2
GYPB-208ENST00000507009 PRR15Q8IV56 129 aa2.55□□□□□ -2
GYPB-208ENST00000507009 TMEM254Q8TBM7 123 aa2.55□□□□□ -2
GYPB-208ENST00000507009 NREPQ16612 68 aa2.54□□□□□ -2
GYPB-208ENST00000507009 Q5W150 140 aa2.54□□□□□ -2
GYPB-208ENST00000507009 SPRR2FQ96RM1 72 aa2.54□□□□□ -2
GYPB-208ENST00000507009 SPRR2GQ9BYE4 73 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms