RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 NBPF19A0A087WUL8 3843 aa0.69□□□□□ -2.3
SPCS3-202ENST00000507001 DEFB1P60022 68 aa0.69□□□□□ -2.3
SPCS3-202ENST00000507001 DEFB110Q30KQ9 67 aa0.69□□□□□ -2.3
SPCS3-202ENST00000507001 NCOR2Q9Y618 2525 aa0.69□□□□□ -2.3
SPCS3-202ENST00000507001 VPS13AQ96RL7 3174 aa0.69□□□□□ -2.3
SPCS3-202ENST00000507001 APC2O95996 2303 aa0.69□□□□□ -2.3
SPCS3-202ENST00000507001 CELSR1Q9NYQ6 3014 aa0.68□□□□□ -2.3
SPCS3-202ENST00000507001 CRYBG3Q68DQ2 2970 aa0.68□□□□□ -2.3
SPCS3-202ENST00000507001 H3BNG1 76 aa0.68□□□□□ -2.3
SPCS3-202ENST00000507001 NAV2Q8IVL1 2488 aa0.68□□□□□ -2.3
SPCS3-202ENST00000507001 SMR3AQ99954 134 aa0.68□□□□□ -2.3
SPCS3-202ENST00000507001 AKAP9Q99996 3911 aa0.68□□□□□ -2.3
SPCS3-202ENST00000507001 TRIOO75962 3097 aa0.68□□□□□ -2.3
SPCS3-202ENST00000507001 PKD1L2Q7Z442 2459 aa0.67□□□□□ -2.3
SPCS3-202ENST00000507001 CHD6Q8TD26 2715 aa0.67□□□□□ -2.3
SPCS3-202ENST00000507001 DNAH11Q96DT5 4516 aa0.67□□□□□ -2.3
SPCS3-202ENST00000507001 ABCA12Q86UK0 2595 aa0.67□□□□□ -2.3
SPCS3-202ENST00000507001 RELNP78509 3460 aa0.67□□□□□ -2.3
SPCS3-202ENST00000507001 COL6A5A8TX70 2615 aa0.67□□□□□ -2.3
SPCS3-202ENST00000507001 SZT2Q5T011 3432 aa0.67□□□□□ -2.3
SPCS3-202ENST00000507001 CCDC168Q8NDH2 2452 aa0.67□□□□□ -2.3
SPCS3-202ENST00000507001 HTTP42858 3142 aa0.67□□□□□ -2.3
SPCS3-202ENST00000507001 NCOR1O75376 2440 aa0.67□□□□□ -2.3
SPCS3-202ENST00000507001 VPS13DQ5THJ4 4388 aa0.67□□□□□ -2.3
SPCS3-202ENST00000507001 BOD1L1Q8NFC6 3051 aa0.66□□□□□ -2.3
SPCS3-202ENST00000507001 SRRM2Q9UQ35 2752 aaKnown RBP0.66□□□□□ -2.3
SPCS3-202ENST00000507001 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
SPCS3-202ENST00000507001 CELSR3Q9NYQ7 3312 aa0.66□□□□□ -2.3
SPCS3-202ENST00000507001 PTPN13Q12923 2485 aa0.65□□□□□ -2.3
SPCS3-202ENST00000507001 TTC28Q96AY4 2481 aa0.65□□□□□ -2.3
SPCS3-202ENST00000507001 SPEGQ15772 3267 aa0.65□□□□□ -2.3
SPCS3-202ENST00000507001 EP300Q09472 2414 aaPredicted RBP0.65□□□□□ -2.31
SPCS3-202ENST00000507001 CREBBPQ92793 2442 aa0.65□□□□□ -2.31
SPCS3-202ENST00000507001 C9orf92A6NGG3 77 aa0.65□□□□□ -2.31
SPCS3-202ENST00000507001 HTN1P15515 57 aa0.65□□□□□ -2.31
SPCS3-202ENST00000507001 RPS29P62273 56 aaKnown RBP0.65□□□□□ -2.31
SPCS3-202ENST00000507001 LINC01556Q5JQF7 62 aa0.65□□□□□ -2.31
SPCS3-202ENST00000507001 DEFB108BQ8NET1 73 aa0.65□□□□□ -2.31
SPCS3-202ENST00000507001 MAP1AP78559 2803 aaPredicted RBP0.65□□□□□ -2.31
SPCS3-202ENST00000507001 FRYQ5TBA9 3013 aa0.65□□□□□ -2.31
SPCS3-202ENST00000507001 PRUNE2Q8WUY3 3088 aa0.65□□□□□ -2.31
SPCS3-202ENST00000507001 UTRNP46939 3433 aa0.64□□□□□ -2.31
SPCS3-202ENST00000507001 ZZEF1O43149 2961 aa0.64□□□□□ -2.31
SPCS3-202ENST00000507001 ZFHX4Q86UP3 3567 aa0.64□□□□□ -2.31
SPCS3-202ENST00000507001 TNP1P09430 55 aa0.64□□□□□ -2.31
SPCS3-202ENST00000507001 NBASA2RRP1 2371 aa0.64□□□□□ -2.31
SPCS3-202ENST00000507001 LRBAP50851 2863 aa0.64□□□□□ -2.31
SPCS3-202ENST00000507001 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
SPCS3-202ENST00000507001 ZNF292O60281 2723 aa0.64□□□□□ -2.31
SPCS3-202ENST00000507001 HECTD1Q9ULT8 2610 aa0.64□□□□□ -2.31
SPCS3-202ENST00000507001 HIVEP3Q5T1R4 2406 aa0.64□□□□□ -2.31
SPCS3-202ENST00000507001 ITPR1Q14643 2758 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 POLQO75417 2590 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 AKAP13Q12802 2813 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 SPTBN5Q9NRC6 3674 aaKnown RBP0.63□□□□□ -2.31
SPCS3-202ENST00000507001 MYCBP2O75592 4640 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 CSMD3Q7Z407 3707 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 EPG5Q9HCE0 2579 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 RIF1Q5UIP0 2472 aaKnown RBP0.63□□□□□ -2.31
SPCS3-202ENST00000507001 CFAP47Q6ZTR5 3102 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 FAM186AA6NE01 2351 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 MKI67P46013 3256 aaKnown RBP0.63□□□□□ -2.31
SPCS3-202ENST00000507001 BDP1A6H8Y1 2624 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 FREM2Q5SZK8 3169 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 LRRK2Q5S007 2527 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 ATMQ13315 3056 aa0.63□□□□□ -2.31
SPCS3-202ENST00000507001 DMBT1Q9UGM3 2413 aaPredicted RBP0.63□□□□□ -2.31
SPCS3-202ENST00000507001 NF1P21359 2839 aa0.62□□□□□ -2.31
SPCS3-202ENST00000507001 C5orf42Q9H799 3197 aa0.62□□□□□ -2.31
SPCS3-202ENST00000507001 USP24Q9UPU5 2620 aa0.62□□□□□ -2.31
SPCS3-202ENST00000507001 CHD9Q3L8U1 2897 aa0.62□□□□□ -2.31
SPCS3-202ENST00000507001 DEFB136Q30KP8 78 aa0.62□□□□□ -2.31
SPCS3-202ENST00000507001 XIRP2A4UGR9 3374 aa0.62□□□□□ -2.31
SPCS3-202ENST00000507001 USP9YO00507 2555 aaPredicted RBP0.62□□□□□ -2.31
SPCS3-202ENST00000507001 CACNA1AO00555 2505 aa0.62□□□□□ -2.31
SPCS3-202ENST00000507001 LAMA5O15230 3695 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 DNAH12Q6ZR08 3092 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 LOC400499M0QZD8 3231 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 CENPFP49454 3210 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 DNAH8Q96JB1 4490 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 DCHS1Q96JQ0 3298 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 ANKHD1Q8IWZ3 2542 aaKnown RBP0.61□□□□□ -2.31
SPCS3-202ENST00000507001 DMDP11532 3685 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 ITPR3Q14573 2671 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 A0A096LPF7 62 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 DEFB135Q30KP9 77 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 MUC3AQ02505 3323 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 COL12A1Q99715 3063 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 NIPBLQ6KC79 2804 aaeCLIP0.61□□□□□ -2.31
SPCS3-202ENST00000507001 SPENQ96T58 3664 aaKnown RBP0.61□□□□□ -2.31
SPCS3-202ENST00000507001 TENM4Q6N022 2769 aa0.61□□□□□ -2.31
SPCS3-202ENST00000507001 BSNQ9UPA5 3926 aa0.6□□□□□ -2.31
SPCS3-202ENST00000507001 DMXL2Q8TDJ6 3036 aa0.6□□□□□ -2.31
SPCS3-202ENST00000507001 WDFY4Q6ZS81 3184 aa0.6□□□□□ -2.31
SPCS3-202ENST00000507001 PCNTO95613 3336 aa0.6□□□□□ -2.31
SPCS3-202ENST00000507001 CD52P31358 61 aa0.6□□□□□ -2.31
SPCS3-202ENST00000507001 SPINK6Q6UWN8 80 aa0.6□□□□□ -2.31
SPCS3-202ENST00000507001 SACSQ9NZJ4 4579 aa0.6□□□□□ -2.31
SPCS3-202ENST00000507001 DMXL1Q9Y485 3027 aa0.6□□□□□ -2.31
SPCS3-202ENST00000507001 SMG1Q96Q15 3661 aaKnown RBP0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms