RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 NAA38Q9BRA0 125 aaKnown RBP4.01□□□□□ -1.77
GYPB-206ENST00000506516 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
GYPB-206ENST00000506516 TRBV7-4A0A0J9YYF1 115 aa4□□□□□ -1.77
GYPB-206ENST00000506516 C9orf92A6NGG3 77 aa4□□□□□ -1.77
GYPB-206ENST00000506516 RBM3P98179 157 aaKnown RBP4□□□□□ -1.77
GYPB-206ENST00000506516 DSCR8Q96T75 97 aa4□□□□□ -1.77
GYPB-206ENST00000506516 A0A087WSZ3 146 aa3.99□□□□□ -1.77
GYPB-206ENST00000506516 A0A1B0GV72 72 aa3.99□□□□□ -1.77
GYPB-206ENST00000506516 A0A1W2PNM2 257 aa3.99□□□□□ -1.77
GYPB-206ENST00000506516 A0A0U1RQV1 116 aa3.98□□□□□ -1.77
GYPB-206ENST00000506516 JMJD7-PLA2G4BH0Y9G9 81 aa3.98□□□□□ -1.77
GYPB-206ENST00000506516 CCKP06307 115 aa3.98□□□□□ -1.77
GYPB-206ENST00000506516 C9JAW5 83 aa3.97□□□□□ -1.77
GYPB-206ENST00000506516 Q8N9P0 234 aaPredicted RBP3.97□□□□□ -1.77
GYPB-206ENST00000506516 A0A1W2PPM0 123 aa3.96□□□□□ -1.78
GYPB-206ENST00000506516 TAX1BP3O14907 124 aa3.96□□□□□ -1.78
GYPB-206ENST00000506516 VPS25Q9BRG1 176 aa3.96□□□□□ -1.78
GYPB-206ENST00000506516 PDE6GP18545 87 aa3.95□□□□□ -1.78
GYPB-206ENST00000506516 COL5A1-AS1Q5SY13 56 aa3.94□□□□□ -1.78
GYPB-206ENST00000506516 A0A1B0GW54 56 aa3.93□□□□□ -1.78
GYPB-206ENST00000506516 IGKV4-1P06312 121 aa3.93□□□□□ -1.78
GYPB-206ENST00000506516 OBSCN-AS1Q96MR7 158 aa3.93□□□□□ -1.78
GYPB-206ENST00000506516 LOC110117498A0A087WWA1 95 aa3.92□□□□□ -1.78
GYPB-206ENST00000506516 H3BT86 120 aa3.92□□□□□ -1.78
GYPB-206ENST00000506516 RPL37P61927 97 aaKnown RBP3.92□□□□□ -1.78
GYPB-206ENST00000506516 Q96NJ1 140 aa3.92□□□□□ -1.78
GYPB-206ENST00000506516 SIGMAR1Q99720 223 aa3.92□□□□□ -1.78
GYPB-206ENST00000506516 SPCS1Q9Y6A9 102 aa3.92□□□□□ -1.78
GYPB-206ENST00000506516 PCP4L1A6NKN8 68 aa3.91□□□□□ -1.78
GYPB-206ENST00000506516 DEFB116Q30KQ4 102 aa3.91□□□□□ -1.78
GYPB-206ENST00000506516 PCOTHQ58A44 107 aa3.91□□□□□ -1.78
GYPB-206ENST00000506516 Q6ZQT0 140 aa3.91□□□□□ -1.78
GYPB-206ENST00000506516 LINC00472Q9H8W2 130 aa3.91□□□□□ -1.78
GYPB-206ENST00000506516 J3KT08 172 aa3.9□□□□□ -1.79
GYPB-206ENST00000506516 LINC00313P59037 77 aa3.9□□□□□ -1.79
GYPB-206ENST00000506516 ATP11AUNQ6ZP68 121 aa3.9□□□□□ -1.79
GYPB-206ENST00000506516 Q75L30 129 aa3.9□□□□□ -1.79
GYPB-206ENST00000506516 C14orf132Q9NPU4 83 aa3.9□□□□□ -1.79
GYPB-206ENST00000506516 MTURNQ8N3F0 131 aa3.89□□□□□ -1.79
GYPB-206ENST00000506516 FAT4Q6V0I7 4981 aa3.88□□□□□ -1.79
GYPB-206ENST00000506516 IGKV2D-30A0A075B6S6 120 aa3.88□□□□□ -1.79
GYPB-206ENST00000506516 NDUFB1O75438 58 aa3.88□□□□□ -1.79
GYPB-206ENST00000506516 DSCR10P59022 87 aa3.88□□□□□ -1.79
GYPB-206ENST00000506516 IGHV6-1A0A0B4J1U7 121 aa3.87□□□□□ -1.79
GYPB-206ENST00000506516 NREPQ16612 68 aa3.87□□□□□ -1.79
GYPB-206ENST00000506516 C20orf166-AS1Q96NR2 134 aa3.87□□□□□ -1.79
GYPB-206ENST00000506516 KRTAP4-1Q9BYQ7 146 aa3.87□□□□□ -1.79
GYPB-206ENST00000506516 C8orf87E5RJ46 101 aa3.86□□□□□ -1.79
GYPB-206ENST00000506516 K7EP34 96 aa3.86□□□□□ -1.79
GYPB-206ENST00000506516 GTF2H5Q6ZYL4 71 aa3.86□□□□□ -1.79
GYPB-206ENST00000506516 A0A1B0GVX0 72 aa3.85□□□□□ -1.79
GYPB-206ENST00000506516 A8MUU9 505 aa3.85□□□□□ -1.79
GYPB-206ENST00000506516 A8MWP4 228 aa3.83□□□□□ -1.8
GYPB-206ENST00000506516 F8W1H4 67 aa3.83□□□□□ -1.8
GYPB-206ENST00000506516 NOTCH2NLQ7Z3S9 236 aa3.83□□□□□ -1.8
GYPB-206ENST00000506516 KRTAP16-1A8MUX0 517 aa3.82□□□□□ -1.8
GYPB-206ENST00000506516 PRO0461Q9UI25 63 aa3.82□□□□□ -1.8
GYPB-206ENST00000506516 IGKV3D-7A0A0C4DH55 119 aa3.8□□□□□ -1.8
GYPB-206ENST00000506516 BPY2O14599 106 aa3.8□□□□□ -1.8
GYPB-206ENST00000506516 PRR15Q8IV56 129 aa3.8□□□□□ -1.8
GYPB-206ENST00000506516 UBL5Q9BZL1 73 aa3.79□□□□□ -1.8
GYPB-206ENST00000506516 C8orf17Q9NRJ1 99 aa3.79□□□□□ -1.8
GYPB-206ENST00000506516 COX6B2Q6YFQ2 88 aa3.78□□□□□ -1.8
GYPB-206ENST00000506516 Q6ZVQ6 151 aa3.78□□□□□ -1.8
GYPB-206ENST00000506516 ETDBQ3ZM63 59 aa3.76□□□□□ -1.81
GYPB-206ENST00000506516 ZCCHC13Q8WW36 166 aaKnown RBP3.76□□□□□ -1.81
GYPB-206ENST00000506516 LINC00846Q9NV44 126 aa3.76□□□□□ -1.81
GYPB-206ENST00000506516 hDV103S1A0JD37 113 aa3.75□□□□□ -1.81
GYPB-206ENST00000506516 K7EQZ3 153 aa3.75□□□□□ -1.81
GYPB-206ENST00000506516 KRTAP19-2Q3LHN2 52 aa3.75□□□□□ -1.81
GYPB-206ENST00000506516 TMEM254Q8TBM7 123 aa3.75□□□□□ -1.81
GYPB-206ENST00000506516 MRPL34Q9BQ48 92 aaKnown RBP3.75□□□□□ -1.81
GYPB-206ENST00000506516 MMP24-AS1A0A0U1RRL7 71 aa3.74□□□□□ -1.81
GYPB-206ENST00000506516 NDUFS5O43920 106 aa3.73□□□□□ -1.81
GYPB-206ENST00000506516 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
GYPB-206ENST00000506516 RBM12B-AS1Q9P1G2 102 aa3.73□□□□□ -1.81
GYPB-206ENST00000506516 M0R2T5 61 aa3.72□□□□□ -1.81
GYPB-206ENST00000506516 MT1HP80294 61 aa3.72□□□□□ -1.81
GYPB-206ENST00000506516 ACYP1P07311 99 aa3.71□□□□□ -1.82
GYPB-206ENST00000506516 SPINK7P58062 85 aa3.71□□□□□ -1.82
GYPB-206ENST00000506516 CASC2Q6XLA1 102 aa3.71□□□□□ -1.82
GYPB-206ENST00000506516 Q8N9L7 120 aa3.71□□□□□ -1.82
GYPB-206ENST00000506516 FAM236DA0A1B0GTK5 79 aa3.7□□□□□ -1.82
GYPB-206ENST00000506516 FAM236CP0DP71 79 aa3.7□□□□□ -1.82
GYPB-206ENST00000506516 CXCL6P80162 114 aa3.7□□□□□ -1.82
GYPB-206ENST00000506516 WFDC13Q8IUB5 93 aa3.7□□□□□ -1.82
GYPB-206ENST00000506516 A0A1B0GV90 55 aa3.68□□□□□ -1.82
GYPB-206ENST00000506516 HCG22E2RYF7 251 aa3.68□□□□□ -1.82
GYPB-206ENST00000506516 HRES1P13985 223 aa3.68□□□□□ -1.82
GYPB-206ENST00000506516 FAM240AA0A1B0GVK7 77 aa3.67□□□□□ -1.82
GYPB-206ENST00000506516 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.83
GYPB-206ENST00000506516 KRTAP10-6P60371 365 aaPredicted RBP3.64□□□□□ -1.83
GYPB-206ENST00000506516 ATP5EP2Q5VTU8 51 aa3.64□□□□□ -1.83
GYPB-206ENST00000506516 Q5W150 140 aa3.64□□□□□ -1.83
GYPB-206ENST00000506516 TP53AIP1Q9HCN2 124 aa3.64□□□□□ -1.83
GYPB-206ENST00000506516 C7orf65Q6ZTY9 151 aa3.63□□□□□ -1.83
GYPB-206ENST00000506516 J3QR89 54 aa3.62□□□□□ -1.83
GYPB-206ENST00000506516 HIST1H4AP62805 103 aaKnown RBP3.62□□□□□ -1.83
GYPB-206ENST00000506516 LINC00643Q86TS7 51 aa3.62□□□□□ -1.83
GYPB-206ENST00000506516 H1FX-AS1Q4G0G2 97 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms