RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 COX17Q14061 63 aa1.32□□□□□ -2.2
NEDD4-205ENST00000506154 ATRQ13535 2644 aa1.32□□□□□ -2.2
NEDD4-205ENST00000506154 TNCP24821 2201 aa1.32□□□□□ -2.2
NEDD4-205ENST00000506154 KRTAP9-2Q9BYQ4 174 aa1.32□□□□□ -2.2
NEDD4-205ENST00000506154 ANAPC11Q9NYG5 84 aa1.32□□□□□ -2.2
NEDD4-205ENST00000506154 H3BNG1 76 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 LINC00158P58513 81 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 CAMK2N1Q7Z7J9 78 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 Q8IZM0 81 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 SMR3AQ99954 134 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 WFDC10AQ9H1F0 79 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 G3V318 75 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 H0Y9P7 68 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 ZGRF1Q86YA3 2104 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 MED13LQ71F56 2210 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 SPRR1AP35321 89 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 KRTAP4-12Q9BQ66 201 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 IGKV3-7A0A075B6H7 116 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 TRGV4A0A0C4DH28 118 aa1.31□□□□□ -2.2
NEDD4-205ENST00000506154 GOLGA4Q13439 2230 aaKnown RBP1.3□□□□□ -2.2
NEDD4-205ENST00000506154 ICE1Q9Y2F5 2266 aa1.3□□□□□ -2.2
NEDD4-205ENST00000506154 KNL1Q8NG31 2342 aa1.3□□□□□ -2.2
NEDD4-205ENST00000506154 PLXNB1O43157 2135 aa1.3□□□□□ -2.2
NEDD4-205ENST00000506154 KRTAP4-5Q9BYR2 181 aa1.3□□□□□ -2.2
NEDD4-205ENST00000506154 IGLV10-54A0A075B6I4 117 aa1.3□□□□□ -2.2
NEDD4-205ENST00000506154 DMAC1Q96GE9 116 aa1.3□□□□□ -2.2
NEDD4-205ENST00000506154 K7EQZ3 153 aa1.3□□□□□ -2.2
NEDD4-205ENST00000506154 NUPR2A6NF83 97 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 HAMPP81172 84 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 Q6ZSA8 131 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 NBEAL2Q6ZNJ1 2754 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 F8P00451 2351 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 H3BUX3 64 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 LINC00304Q8N9R0 145 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 NAV2Q8IVL1 2488 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 IGKV3OR2-268A0A0C4DH90 116 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 MMP24-AS1A0A0U1RRL7 71 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 MIR22HGQ0VDD5 57 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 BRD3OSQ6XYD6 125 aa1.29□□□□□ -2.2
NEDD4-205ENST00000506154 STAB2Q8WWQ8 2551 aa1.28□□□□□ -2.2
NEDD4-205ENST00000506154 KRTAP19-2Q3LHN2 52 aa1.28□□□□□ -2.2
NEDD4-205ENST00000506154 SETD2Q9BYW2 2564 aaPredicted RBP1.28□□□□□ -2.2
NEDD4-205ENST00000506154 CNOT1A5YKK6 2376 aaKnown RBP1.28□□□□□ -2.2
NEDD4-205ENST00000506154 LCE5AQ5TCM9 118 aa1.28□□□□□ -2.2
NEDD4-205ENST00000506154 ACACAQ13085 2346 aa1.28□□□□□ -2.2
NEDD4-205ENST00000506154 K7EIL1 84 aa1.28□□□□□ -2.21
NEDD4-205ENST00000506154 KRTAP2-2Q9BYT5 123 aa1.28□□□□□ -2.21
NEDD4-205ENST00000506154 IGKV2-24A0A0C4DH68 120 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 CLPSL2Q6UWE3 100 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 KRTAP13-1Q8IUC0 172 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 COL6A5A8TX70 2615 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 A0A1W2PNN7 141 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 IGLV7-43P04211 117 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 Q96NJ1 140 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 A0A0G2JQZ4 141 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 MGPP08493 103 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 LY6EQ16553 131 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 URB1O60287 2271 aaKnown RBP1.27□□□□□ -2.21
NEDD4-205ENST00000506154 KRTAP9-3Q9BYQ3 159 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 R4GN34 69 aa1.27□□□□□ -2.21
NEDD4-205ENST00000506154 SPRR1BP22528 89 aa1.26□□□□□ -2.21
NEDD4-205ENST00000506154 PRB3Q04118 309 aaPredicted RBP1.26□□□□□ -2.21
NEDD4-205ENST00000506154 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
NEDD4-205ENST00000506154 MAPK1IP1LQ8NDC0 245 aa1.26□□□□□ -2.21
NEDD4-205ENST00000506154 KRTAP4-8Q9BYQ9 185 aa1.26□□□□□ -2.21
NEDD4-205ENST00000506154 STAB1Q9NY15 2570 aa1.26□□□□□ -2.21
NEDD4-205ENST00000506154 SPAG11BQ08648 103 aa1.26□□□□□ -2.21
NEDD4-205ENST00000506154 KRTAP1-5Q9BYS1 174 aa1.26□□□□□ -2.21
NEDD4-205ENST00000506154 TPRXLQ17RH7 258 aa1.26□□□□□ -2.21
NEDD4-205ENST00000506154 PRB2P02812 416 aaPredicted RBP1.25□□□□□ -2.21
NEDD4-205ENST00000506154 UQCR11O14957 56 aa1.25□□□□□ -2.21
NEDD4-205ENST00000506154 DEFB1P60022 68 aa1.25□□□□□ -2.21
NEDD4-205ENST00000506154 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
NEDD4-205ENST00000506154 LCE3CQ5T5A8 94 aa1.25□□□□□ -2.21
NEDD4-205ENST00000506154 APLNQ9ULZ1 77 aa1.25□□□□□ -2.21
NEDD4-205ENST00000506154 H0YAA0 97 aa1.25□□□□□ -2.21
NEDD4-205ENST00000506154 SPTAN1Q13813 2472 aaKnown RBP1.25□□□□□ -2.21
NEDD4-205ENST00000506154 LY6G6CO95867 125 aa1.25□□□□□ -2.21
NEDD4-205ENST00000506154 SPINT4Q6UDR6 99 aa1.25□□□□□ -2.21
NEDD4-205ENST00000506154 RP1L1Q8IWN7 2480 aaPredicted RBP1.25□□□□□ -2.21
NEDD4-205ENST00000506154 ANGP03950 147 aaKnown RBP1.24□□□□□ -2.21
NEDD4-205ENST00000506154 LCE3BQ5TA77 95 aa1.24□□□□□ -2.21
NEDD4-205ENST00000506154 RHPN1-AS1Q9BWJ2 59 aa1.24□□□□□ -2.21
NEDD4-205ENST00000506154 LPAP08519 4548 aa1.24□□□□□ -2.21
NEDD4-205ENST00000506154 SPAG11AQ6PDA7 123 aa1.24□□□□□ -2.21
NEDD4-205ENST00000506154 OBSCNQ5VST9 7968 aa1.24□□□□□ -2.21
NEDD4-205ENST00000506154 NBDYA0A0U1RRE5 68 aa1.24□□□□□ -2.21
NEDD4-205ENST00000506154 SPRR5A0A1B0GTR4 108 aa1.23□□□□□ -2.21
NEDD4-205ENST00000506154 C2CD3Q4AC94 2353 aa1.23□□□□□ -2.21
NEDD4-205ENST00000506154 LCE3EQ5T5B0 92 aa1.23□□□□□ -2.21
NEDD4-205ENST00000506154 TP53AIP1Q9HCN2 124 aa1.23□□□□□ -2.21
NEDD4-205ENST00000506154 DOPEY2Q9Y3R5 2298 aa1.23□□□□□ -2.21
NEDD4-205ENST00000506154 CCDC168Q8NDH2 2452 aa1.22□□□□□ -2.21
NEDD4-205ENST00000506154 CNTRLQ7Z7A1 2325 aa1.22□□□□□ -2.21
NEDD4-205ENST00000506154 DEFB104AQ8WTQ1 72 aa1.22□□□□□ -2.21
NEDD4-205ENST00000506154 SPTBN1Q01082 2364 aaKnown RBP1.21□□□□□ -2.22
NEDD4-205ENST00000506154 Q6ZRX8 168 aa1.21□□□□□ -2.22
NEDD4-205ENST00000506154 MUC2Q02817 5179 aa1.21□□□□□ -2.22
NEDD4-205ENST00000506154 A0A096LPF7 62 aa1.21□□□□□ -2.22
NEDD4-205ENST00000506154 USH2AO75445 5202 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms