RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 PLAC8Q9NZF1 115 aa9.51□□□□□ -0.89
DDX41-205ENST00000505081 DNAH6Q9C0G6 4158 aa9.5□□□□□ -0.89
DDX41-205ENST00000505081 CDK2AP2O75956 126 aa9.5□□□□□ -0.89
DDX41-205ENST00000505081 C1orf195Q5TG92 126 aa9.5□□□□□ -0.89
DDX41-205ENST00000505081 TP53AIP1Q9HCN2 124 aa9.49□□□□□ -0.89
DDX41-205ENST00000505081 Q6ZR54 194 aa9.48□□□□□ -0.89
DDX41-205ENST00000505081 MRPL34Q9BQ48 92 aaKnown RBP9.47□□□□□ -0.89
DDX41-205ENST00000505081 ALMS1Q8TCU4 4167 aa9.47□□□□□ -0.89
DDX41-205ENST00000505081 PRR15LQ9BU68 103 aa9.47□□□□□ -0.89
DDX41-205ENST00000505081 V9GYY9 64 aa9.47□□□□□ -0.89
DDX41-205ENST00000505081 DNAH11Q96DT5 4516 aa9.45□□□□□ -0.9
DDX41-205ENST00000505081 CIRBP-AS1Q8TBR5 109 aa9.45□□□□□ -0.9
DDX41-205ENST00000505081 CHKB-CPT1BH3BT56 60 aa9.43□□□□□ -0.9
DDX41-205ENST00000505081 DNAH5Q8TE73 4624 aa9.43□□□□□ -0.9
DDX41-205ENST00000505081 IGLV7-43P04211 117 aa9.42□□□□□ -0.9
DDX41-205ENST00000505081 DNHD1Q96M86 4753 aa9.41□□□□□ -0.9
DDX41-205ENST00000505081 Q5W150 140 aa9.41□□□□□ -0.9
DDX41-205ENST00000505081 LIMD2Q9BT23 127 aa9.41□□□□□ -0.9
DDX41-205ENST00000505081 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
DDX41-205ENST00000505081 SPAG11AQ6PDA7 123 aa9.38□□□□□ -0.91
DDX41-205ENST00000505081 HRES1P13985 223 aa9.37□□□□□ -0.91
DDX41-205ENST00000505081 LY6G6CO95867 125 aa9.36□□□□□ -0.91
DDX41-205ENST00000505081 KRTAP10-2P60368 255 aa9.34□□□□□ -0.91
DDX41-205ENST00000505081 LRP1BQ9NZR2 4599 aa9.33□□□□□ -0.92
DDX41-205ENST00000505081 KRTAP13-3Q3SY46 172 aa9.31□□□□□ -0.92
DDX41-205ENST00000505081 RETNLBQ9BQ08 111 aa9.31□□□□□ -0.92
DDX41-205ENST00000505081 LOC101927531A0A1B0GV80 90 aa9.3□□□□□ -0.92
DDX41-205ENST00000505081 LCA10Q71F78 164 aa9.3□□□□□ -0.92
DDX41-205ENST00000505081 A6NED7 52 aa9.3□□□□□ -0.92
DDX41-205ENST00000505081 Q75L30 129 aa9.3□□□□□ -0.92
DDX41-205ENST00000505081 PRR26Q8N8Z3 221 aa9.27□□□□□ -0.93
DDX41-205ENST00000505081 HYDINQ4G0P3 5121 aa9.27□□□□□ -0.93
DDX41-205ENST00000505081 SPTSSBQ8NFR3 76 aa9.27□□□□□ -0.93
DDX41-205ENST00000505081 LINC01558Q9Y6Z2 57 aa9.26□□□□□ -0.93
DDX41-205ENST00000505081 PMAIP1Q13794 54 aa9.25□□□□□ -0.93
DDX41-205ENST00000505081 KRTAP13-2Q52LG2 175 aa9.25□□□□□ -0.93
DDX41-205ENST00000505081 SSBP3-AS1Q7Z2R9 100 aa9.25□□□□□ -0.93
DDX41-205ENST00000505081 PKD1P98161 4303 aa9.24□□□□□ -0.93
DDX41-205ENST00000505081 LINC00313P59037 77 aa9.21□□□□□ -0.93
DDX41-205ENST00000505081 SPINK7P58062 85 aa9.2□□□□□ -0.94
DDX41-205ENST00000505081 KRTAP10-1P60331 282 aa9.2□□□□□ -0.94
DDX41-205ENST00000505081 C8orf87E5RJ46 101 aa9.19□□□□□ -0.94
DDX41-205ENST00000505081 FAT2Q9NYQ8 4349 aa9.19□□□□□ -0.94
DDX41-205ENST00000505081 VPS13BQ7Z7G8 4022 aa9.18□□□□□ -0.94
DDX41-205ENST00000505081 CDC42SE1Q9NRR8 79 aa9.14□□□□□ -0.95
DDX41-205ENST00000505081 ACYP2P14621 99 aa9.12□□□□□ -0.95
DDX41-205ENST00000505081 ATP11AUNQ6ZP68 121 aa9.12□□□□□ -0.95
DDX41-205ENST00000505081 FAM229AH3BQW9 127 aa9.11□□□□□ -0.95
DDX41-205ENST00000505081 KRTAP16-1A8MUX0 517 aa9.11□□□□□ -0.95
DDX41-205ENST00000505081 KRTAP1-4P0C5Y4 121 aa9.11□□□□□ -0.95
DDX41-205ENST00000505081 Q6ZSA8 131 aa9.1□□□□□ -0.95
DDX41-205ENST00000505081 DMAC1Q96GE9 116 aa9.09□□□□□ -0.95
DDX41-205ENST00000505081 IGKV2-30P06310 120 aa9.09□□□□□ -0.95
DDX41-205ENST00000505081 SEC61GP60059 68 aa9.07□□□□□ -0.96
DDX41-205ENST00000505081 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
DDX41-205ENST00000505081 A6NN06 94 aa9.05□□□□□ -0.96
DDX41-205ENST00000505081 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
DDX41-205ENST00000505081 PLA2G1BP04054 148 aaKnown RBP9.02□□□□□ -0.97
DDX41-205ENST00000505081 KTN1-AS1Q86SY8 53 aa9.01□□□□□ -0.97
DDX41-205ENST00000505081 TYMSOSQ8TAI1 123 aa8.98□□□□□ -0.97
DDX41-205ENST00000505081 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
DDX41-205ENST00000505081 A0A1B0GU69 56 aa8.94□□□□□ -0.98
DDX41-205ENST00000505081 C7orf65Q6ZTY9 151 aa8.93□□□□□ -0.98
DDX41-205ENST00000505081 SPINK1P00995 79 aa8.88□□□□□ -0.99
DDX41-205ENST00000505081 DYNC1H1Q14204 4646 aaKnown RBP8.88□□□□□ -0.99
DDX41-205ENST00000505081 Q8N1X5 172 aa8.87□□□□□ -0.99
DDX41-205ENST00000505081 SACSQ9NZJ4 4579 aa8.87□□□□□ -0.99
DDX41-205ENST00000505081 FAT1Q14517 4588 aa8.87□□□□□ -0.99
DDX41-205ENST00000505081 SMR3BP02814 79 aaPredicted RBP8.87□□□□□ -0.99
DDX41-205ENST00000505081 RBM12B-AS1Q9P1G2 102 aa8.86□□□□□ -0.99
DDX41-205ENST00000505081 LINC00304Q8N9R0 145 aa8.84□□□□□ -0.99
DDX41-205ENST00000505081 C9orf92A6NGG3 77 aa8.8□□□□□ -1
DDX41-205ENST00000505081 SPATA8Q6RVD6 105 aa8.79□□□□□ -1
DDX41-205ENST00000505081 MIR22HGQ0VDD5 57 aa8.77□□□□□ -1
DDX41-205ENST00000505081 ADM2Q7Z4H4 148 aa8.76□□□□□ -1.01
DDX41-205ENST00000505081 PRAC1Q96KF2 57 aa8.76□□□□□ -1.01
DDX41-205ENST00000505081 UQCR11O14957 56 aa8.76□□□□□ -1.01
DDX41-205ENST00000505081 APOBP04114 4563 aaKnown RBP8.73□□□□□ -1.01
DDX41-205ENST00000505081 PKHD1L1Q86WI1 4243 aa8.7□□□□□ -1.02
DDX41-205ENST00000505081 RPS29P62273 56 aaKnown RBP8.67□□□□□ -1.02
DDX41-205ENST00000505081 KRTAP3-1Q9BYR8 98 aa8.64□□□□□ -1.03
DDX41-205ENST00000505081 A8MUU9 505 aa8.63□□□□□ -1.03
DDX41-205ENST00000505081 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
DDX41-205ENST00000505081 C20orf166-AS1Q96NR2 134 aa8.63□□□□□ -1.03
DDX41-205ENST00000505081 A0A1B0GVY2 172 aa8.57□□□□□ -1.04
DDX41-205ENST00000505081 RYR2Q92736 4967 aa8.55□□□□□ -1.04
DDX41-205ENST00000505081 LRP1Q07954 4544 aaKnown RBP8.55□□□□□ -1.04
DDX41-205ENST00000505081 FLG2Q5D862 2391 aaPredicted RBP8.54□□□□□ -1.04
DDX41-205ENST00000505081 H0YAA0 97 aa8.53□□□□□ -1.04
DDX41-205ENST00000505081 KMT2CQ8NEZ4 4911 aaKnown RBP8.52□□□□□ -1.05
DDX41-205ENST00000505081 FAT3Q8TDW7 4589 aa8.5□□□□□ -1.05
DDX41-205ENST00000505081 HSPG2P98160 4391 aa8.44□□□□□ -1.06
DDX41-205ENST00000505081 A0A1B0GU33 70 aa8.44□□□□□ -1.06
DDX41-205ENST00000505081 CSAG1Q6PB30 78 aa8.44□□□□□ -1.06
DDX41-205ENST00000505081 TNXBP22105 4242 aa8.43□□□□□ -1.06
DDX41-205ENST00000505081 MYCBP2O75592 4640 aa8.43□□□□□ -1.06
DDX41-205ENST00000505081 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.06
DDX41-205ENST00000505081 COX6B2Q6YFQ2 88 aa8.4□□□□□ -1.06
DDX41-205ENST00000505081 DMBT1Q9UGM3 2413 aaPredicted RBP8.37□□□□□ -1.07
DDX41-205ENST00000505081 LINC01554Q52M75 96 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms